Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:13 (2388630): wrapper (7.7.26015): starting
07:54:13 (2388630): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 07:54:13] Arguments: --nthreads 3
[2025-11-23 07:54:13] Threads: 3
[2025-11-23 07:54:13] Checking for CVMFS
[2025-11-23 07:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:54:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:54:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:54:13] 2.9.2.0 1731473 469 66652 153199 0 108 34807491 36864001 0 130560 0 1963358 99.998 17018 10791 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 07:54:13] CVMFS is ok
[2025-11-23 07:54:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:54:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:54:13] Further information can be found at the LHC@home message board.
[2025-11-23 07:54:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:54:13] Checking for apptainer binary...
[2025-11-23 07:54:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:54:13] Running /usr/bin/apptainer --version
[2025-11-23 07:54:13] apptainer version 1.4.1-1.1
[2025-11-23 07:54:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:54:13] thA335
[2025-11-23 07:54:13] apptainer works
[2025-11-23 07:54:13] Set ATHENA_PROC_NUMBER=3
[2025-11-23 07:54:13] Set ATHENA_CORE_NUMBER=3
[2025-11-23 07:54:13] Starting ATLAS job with PandaID=6895337525
[2025-11-23 07:54:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:58:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:58:30] 
[2025-11-23 07:58:30] 2025-11-23 06:57:38,279 | INFO     | ***************************************
[2025-11-23 07:58:30] 2025-11-23 06:57:38,781 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | INFO     | sufficient remaining disk space (827234189312 B)
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | INFO     | update_server=False
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:58:30] 2025-11-23 06:57:38,795 | INFO     | aborting loop
[2025-11-23 07:58:30] 2025-11-23 06:57:39,086 | INFO     | all job control threads have been joined
[2025-11-23 07:58:30] 2025-11-23 06:57:39,801 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:39,802 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:39,802 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:39,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:58:30] 2025-11-23 06:57:39,854 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:39,893 | INFO     | all data control threads have been joined
[2025-11-23 07:58:30] 2025-11-23 06:57:40,092 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:40,093 | INFO     | [job] control thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:40,165 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:40,256 | INFO     | all payload control threads have been joined
[2025-11-23 07:58:30] 2025-11-23 06:57:40,807 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:40,899 | INFO     | [data] control thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,222 | INFO     | [job] validate thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,222 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,262 | INFO     | [payload] control thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,288 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,817 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:57:41,873 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:58:30] 2025-11-23 06:57:45,880 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:58:30] 2025-11-23 06:58:09,301 | INFO     | PID=2392354 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 07:58:30] 2025-11-23 06:58:09,302 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:58:30] 2025-11-23 06:58:09,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:58:30] 2025-11-23 06:58:09,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:58:30] 2025-11-23 06:58:24,325 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:58:30] 2025-11-23 06:58:25,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002492798784)>', '<ExcThread(monitor, started 140001991956224)>']
[2025-11-23 07:58:30] 2025-11-23 06:58:26,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:58:30] 2025-11-23 06:58:26,393 | INFO     | [monitor] control thread has ended
[2025-11-23 07:58:30] 2025-11-23 06:58:30,645 | INFO     | all workflow threads have been joined
[2025-11-23 07:58:30] 2025-11-23 06:58:30,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:58:30] 2025-11-23 06:58:30,645 | INFO     | traces error code: 0
[2025-11-23 07:58:30] 2025-11-23 06:58:30,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:58:30] 2025-11-23 06:58:30,690 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:58:30] 2025-11-23 06:58:30,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:58:30] 2025-11-23 06:58:30,696 [wrapper] pilotpid: 2392354
[2025-11-23 07:58:30] 2025-11-23 06:58:30,698 [wrapper] Pilot exit status: 0
[2025-11-23 07:58:30] 2025-11-23 06:58:30,705 [wrapper] pandaids: 6895337525
[2025-11-23 07:58:30] 2025-11-23 06:58:30,721 [wrapper] cleanup supervisor_pilot 2392360 2392355
[2025-11-23 07:58:30] 2025-11-23 06:58:30,723 [wrapper] Test setup, not cleaning
[2025-11-23 07:58:30] 2025-11-23 06:58:30,726 [wrapper] apfmon messages muted
[2025-11-23 07:58:30] 2025-11-23 06:58:30,728 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:58:30] 2025-11-23 06:58:30,731 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:58:30]  *** Error codes and diagnostics ***
[2025-11-23 07:58:30]     "exeErrorCode": 65,
[2025-11-23 07:58:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 07:58:30]     "pilotErrorCode": 1305,
[2025-11-23 07:58:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 07:58:30]  *** Listing of results directory ***
[2025-11-23 07:58:30] total 404464
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc    576529 Nov 22 08:52 pilot3.tar.gz
[2025-11-23 07:58:30] -rwx------ 1 boinc boinc     36292 Nov 22 09:12 runpilot2-wrapper.sh
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:12 queuedata.json
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc       100 Nov 23 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:58:30] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 07:54 run_atlas
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc       105 Nov 23 07:54 job.xml
[2025-11-23 07:58:30] -rw-r--r-- 2 boinc boinc 409963176 Nov 23 07:54 EVNT.47483658._000310.pool.root.1
[2025-11-23 07:58:30] -rw-r--r-- 2 boinc boinc    590099 Nov 23 07:54 input.tar.gz
[2025-11-23 07:58:30] -rw-r--r-- 2 boinc boinc     15847 Nov 23 07:54 start_atlas.sh
[2025-11-23 07:58:30] drwxrwx--x 2 boinc boinc      4096 Nov 23 07:54 shared
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:54 boinc_setup_complete
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc      6194 Nov 23 07:54 init_data.xml
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:54 boinc_lockfile
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc      2785 Nov 23 07:54 pandaJob.out
[2025-11-23 07:58:30] -rw------- 1 boinc boinc    989784 Nov 23 07:54 agis_schedconf.cvmfs.json
[2025-11-23 07:58:30] -rw------- 1 boinc boinc   1526164 Nov 23 07:54 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:58:30] drwx------ 5 boinc boinc      4096 Nov 23 07:54 pilot3
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc       522 Nov 23 07:55 boinc_task_state.xml
[2025-11-23 07:58:30] -rw------- 1 boinc boinc       955 Nov 23 07:55 memory_monitor_summary.json
[2025-11-23 07:58:30] -rw------- 1 boinc boinc     55875 Nov 23 07:55 log.47556137._003070.job.log.tgz.1
[2025-11-23 07:58:30] -rw------- 1 boinc boinc        95 Nov 23 07:57 pilot_heartbeat.json
[2025-11-23 07:58:30] -rw------- 1 boinc boinc      8402 Nov 23 07:57 heartbeat.json
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc      8192 Nov 23 07:58 boinc_mmap_file
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc        22 Nov 23 07:58 wrapper_checkpoint.txt
[2025-11-23 07:58:30] -rw------- 1 boinc boinc      4752 Nov 23 07:58 pilotlog.txt
[2025-11-23 07:58:30] -rw------- 1 boinc boinc     93242 Nov 23 07:58 log.47556137._003070.job.log.1
[2025-11-23 07:58:30] -rw------- 1 boinc boinc       186 Nov 23 07:58 output.list
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc       620 Nov 23 07:58 runtime_log
[2025-11-23 07:58:30] -rw------- 1 boinc boinc    174080 Nov 23 07:58 result.tar.gz
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc      8744 Nov 23 07:58 runtime_log.err
[2025-11-23 07:58:30] -rw------- 1 boinc boinc       649 Nov 23 07:58 6S0MDmhuxg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmc1HKDmidjWSo.diag
[2025-11-23 07:58:30] -rw-r--r-- 1 boinc boinc      8472 Nov 23 07:58 stderr.txt
[2025-11-23 07:58:30] No HITS result produced
[2025-11-23 07:58:30]  *** Contents of shared directory: ***
[2025-11-23 07:58:30] total 401128
[2025-11-23 07:58:30] -rw-r--r-- 2 boinc boinc 409963176 Nov 23 07:54 ATLAS.root_0
[2025-11-23 07:58:30] -rw-r--r-- 2 boinc boinc    590099 Nov 23 07:54 input.tar.gz
[2025-11-23 07:58:30] -rw-r--r-- 2 boinc boinc     15847 Nov 23 07:54 start_atlas.sh
[2025-11-23 07:58:30] -rw------- 1 boinc boinc    174080 Nov 23 07:58 result.tar.gz
07:58:31 (2388630): run_atlas exited; CPU time 31.480526
07:58:31 (2388630): called boinc_finish(0)

</stderr_txt>
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