Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:07:19 (3458669): wrapper (7.7.26015): starting
23:07:19 (3458669): wrapper: running run_atlas (--nthreads 2)
[2025-11-25 23:07:19] Arguments: --nthreads 2
[2025-11-25 23:07:19] Threads: 2
[2025-11-25 23:07:19] Checking for CVMFS
[2025-11-25 23:07:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:07:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:07:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:07:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:07:19] 2.9.2.0 2254411 10401 61616 153298 2 81 36271914 36864001 0 130560 1 3322544 99.923 532417 719 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 23:07:19] CVMFS is ok
[2025-11-25 23:07:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:07:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:07:19] Further information can be found at the LHC@home message board.
[2025-11-25 23:07:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:07:19] Checking for apptainer binary...
[2025-11-25 23:07:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:07:19] Running /usr/bin/apptainer --version
[2025-11-25 23:07:19] apptainer version 1.4.1-1.1
[2025-11-25 23:07:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:07:19] thA331
[2025-11-25 23:07:19] apptainer works
[2025-11-25 23:07:19] Set ATHENA_PROC_NUMBER=2
[2025-11-25 23:07:19] Set ATHENA_CORE_NUMBER=2
[2025-11-25 23:07:19] Starting ATLAS job with PandaID=6895337518
[2025-11-25 23:07:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:47:45]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:47:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:47:45] 
[2025-11-26 11:47:45] 2025-11-26 10:46:56,818 | INFO     | ***************************************
[2025-11-26 11:47:45] 2025-11-26 10:46:57,321 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 11:47:45] 2025-11-26 10:46:57,334 | INFO     | sufficient remaining disk space (221097492480 B)
[2025-11-26 11:47:45] 2025-11-26 10:46:57,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:47:45] 2025-11-26 10:46:57,334 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:47:45] 2025-11-26 10:46:57,334 | INFO     | update_server=False
[2025-11-26 11:47:45] 2025-11-26 10:46:57,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:47:45] 2025-11-26 10:46:57,350 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 11:47:45] 2025-11-26 10:46:57,351 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 11:47:45] 2025-11-26 10:46:57,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:47:45] 2025-11-26 10:46:57,351 | INFO     | will abort loop
[2025-11-26 11:47:45] 2025-11-26 10:46:57,703 | INFO     | all data control threads have been joined
[2025-11-26 11:47:45] 2025-11-26 10:46:57,717 | INFO     | all payload control threads have been joined
[2025-11-26 11:47:45] 2025-11-26 10:46:57,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:47:45] 2025-11-26 10:46:57,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:47:45] 2025-11-26 10:46:58,337 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:58,356 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:58,474 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:58,556 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:58,610 | INFO     | all job control threads have been joined
[2025-11-26 11:47:45] 2025-11-26 10:46:58,709 | INFO     | [data] control thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:58,720 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:58,723 | INFO     | [payload] control thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,481 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,486 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,491 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,613 | INFO     | [job] control thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,770 | INFO     | [job] validate thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:46:59,978 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:47:00,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:47:45] 2025-11-26 10:47:01,292 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:47:02,000 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:47:45] 2025-11-26 10:47:26,889 | INFO     | PID=3462379 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:47:45] 2025-11-26 10:47:26,889 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:47:45] 2025-11-26 10:47:26,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:47:45] 2025-11-26 10:47:26,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:47:45] 2025-11-26 10:47:39,848 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:47:45] 2025-11-26 10:47:40,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241656932160)>', '<ExcThread(monitor, started 140240899512064)>']
[2025-11-26 11:47:45] 2025-11-26 10:47:40,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:47:45] 2025-11-26 10:47:40,954 | INFO     | [monitor] control thread has ended
[2025-11-26 11:47:45] 2025-11-26 10:47:45,793 | INFO     | all workflow threads have been joined
[2025-11-26 11:47:45] 2025-11-26 10:47:45,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:47:45] 2025-11-26 10:47:45,794 | INFO     | traces error code: 0
[2025-11-26 11:47:45] 2025-11-26 10:47:45,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:47:45] 2025-11-26 10:47:45,838 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:47:45] 2025-11-26 10:47:45,840 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:47:45] 2025-11-26 10:47:45,843 [wrapper] pilotpid: 3462379
[2025-11-26 11:47:45] 2025-11-26 10:47:45,845 [wrapper] Pilot exit status: 0
[2025-11-26 11:47:45] 2025-11-26 10:47:45,851 [wrapper] pandaids: 6895337518
[2025-11-26 11:47:45] 2025-11-26 10:47:45,866 [wrapper] cleanup supervisor_pilot 3542689 3462380
[2025-11-26 11:47:45] 2025-11-26 10:47:45,868 [wrapper] Test setup, not cleaning
[2025-11-26 11:47:45] 2025-11-26 10:47:45,870 [wrapper] apfmon messages muted
[2025-11-26 11:47:45] 2025-11-26 10:47:45,872 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:47:45] 2025-11-26 10:47:45,874 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:47:45]  *** Error codes and diagnostics ***
[2025-11-26 11:47:45]     "exeErrorCode": 0,
[2025-11-26 11:47:45]     "exeErrorDiag": "",
[2025-11-26 11:47:45]     "pilotErrorCode": 0,
[2025-11-26 11:47:45]     "pilotErrorDiag": "",
[2025-11-26 11:47:45]  *** Listing of results directory ***
[2025-11-26 11:47:45] total 1324604
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc    576529 Nov 22 08:52 pilot3.tar.gz
[2025-11-26 11:47:45] -rwx------ 1 boinc boinc     36292 Nov 22 09:12 runpilot2-wrapper.sh
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:12 queuedata.json
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc       100 Nov 25 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:47:45] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:07 run_atlas
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc       105 Nov 25 23:07 job.xml
[2025-11-26 11:47:45] -rw-r--r-- 2 boinc boinc 409963176 Nov 25 23:07 EVNT.47483658._000310.pool.root.1
[2025-11-26 11:47:45] -rw-r--r-- 2 boinc boinc    590098 Nov 25 23:07 input.tar.gz
[2025-11-26 11:47:45] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:07 start_atlas.sh
[2025-11-26 11:47:45] drwxrwx--x 2 boinc boinc      4096 Nov 25 23:07 shared
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:07 boinc_setup_complete
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc      6207 Nov 25 23:07 init_data.xml
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:07 boinc_lockfile
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc      2785 Nov 25 23:07 pandaJob.out
[2025-11-26 11:47:45] -rw------- 1 boinc boinc    991893 Nov 25 23:07 agis_schedconf.cvmfs.json
[2025-11-26 11:47:45] drwx------ 5 boinc boinc      4096 Nov 25 23:07 pilot3
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc       531 Nov 26 11:43 boinc_task_state.xml
[2025-11-26 11:47:45] -rw------- 1 boinc boinc 927260915 Nov 26 11:46 HITS.47556137._003063.pool.root.1
[2025-11-26 11:47:45] -rw------- 1 boinc boinc      1022 Nov 26 11:46 memory_monitor_summary.json
[2025-11-26 11:47:45] -rw------- 1 boinc boinc        95 Nov 26 11:46 pilot_heartbeat.json
[2025-11-26 11:47:45] -rw------- 1 boinc boinc   1516240 Nov 26 11:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:47:45] -rw------- 1 boinc boinc   1238468 Nov 26 11:46 log.47556137._003063.job.log.tgz.1
[2025-11-26 11:47:45] -rw------- 1 boinc boinc      8560 Nov 26 11:46 heartbeat.json
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:47 boinc_mmap_file
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc        28 Nov 26 11:47 wrapper_checkpoint.txt
[2025-11-26 11:47:45] -rw------- 1 boinc boinc      4938 Nov 26 11:47 pilotlog.txt
[2025-11-26 11:47:45] -rw------- 1 boinc boinc   6392777 Nov 26 11:47 log.47556137._003063.job.log.1
[2025-11-26 11:47:45] -rw------- 1 boinc boinc       353 Nov 26 11:47 output.list
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:47 runtime_log
[2025-11-26 11:47:45] -rw------- 1 boinc boinc   7649280 Nov 26 11:47 result.tar.gz
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc      8898 Nov 26 11:47 runtime_log.err
[2025-11-26 11:47:45] -rw------- 1 boinc boinc       665 Nov 26 11:47 9aoMDmhuxg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmV1HKDmtKl7im.diag
[2025-11-26 11:47:45] -rw-r--r-- 1 boinc boinc      8272 Nov 26 11:47 stderr.txt
[2025-11-26 11:47:45] HITS file was successfully produced:
[2025-11-26 11:47:45] -rw------- 1 boinc boinc 927260915 Nov 26 11:46 shared/HITS.pool.root.1
[2025-11-26 11:47:45]  *** Contents of shared directory: ***
[2025-11-26 11:47:45] total 1313964
[2025-11-26 11:47:45] -rw-r--r-- 2 boinc boinc 409963176 Nov 25 23:07 ATLAS.root_0
[2025-11-26 11:47:45] -rw-r--r-- 2 boinc boinc    590098 Nov 25 23:07 input.tar.gz
[2025-11-26 11:47:45] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:07 start_atlas.sh
[2025-11-26 11:47:45] -rw------- 1 boinc boinc 927260915 Nov 26 11:46 HITS.pool.root.1
[2025-11-26 11:47:45] -rw------- 1 boinc boinc   7649280 Nov 26 11:47 result.tar.gz
11:47:47 (3458669): run_atlas exited; CPU time 90387.661849
11:47:47 (3458669): called boinc_finish(0)

</stderr_txt>
]]>

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