Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:45:36 (13478): wrapper (7.7.26015): starting
00:45:36 (13478): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:45:36] Arguments: --nthreads 12
[2025-11-23 00:45:36] Threads: 12
[2025-11-23 00:45:36] Checking for CVMFS
[2025-11-23 00:45:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:45:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:45:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:45:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:45:36] 2.11.2.0 3081 282912 95516 153198 3 59 13078290 20275200 1 130560 1 127521001 99.965 16693616 14252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:45:36] CVMFS is ok
[2025-11-23 00:45:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:45:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:45:36] Further information can be found at the LHC@home message board.
[2025-11-23 00:45:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:45:36] Checking for apptainer binary...
[2025-11-23 00:45:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:45:36] Running /usr/bin/apptainer --version
[2025-11-23 00:45:36] apptainer version 1.3.2-1.el7
[2025-11-23 00:45:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:45:37] c-205-29.aglt2.org
[2025-11-23 00:45:37] apptainer works
[2025-11-23 00:45:37] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:45:37] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:45:38] Starting ATLAS job with PandaID=6895348863
[2025-11-23 00:45:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:58:41]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:58:41] 2025-11-23 12:57:38,266 | INFO     | time since job start (25905s) is within the limit (172800.0s)
[2025-11-23 07:58:41] 2025-11-23 12:57:38,716 | INFO     | monitor loop #1940: job 0:6895348863 is in state 'finished'
[2025-11-23 07:58:41] 2025-11-23 12:57:38,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,272 | INFO     | time since job start (25907s) is within the limit (172800.0s)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,633 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 07:58:41] 2025-11-23 12:57:40,637 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-11-23 07:58:41] 2025-11-23 12:57:40,639 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895348863/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,640 | INFO     | extracted standard info from prmon json
[2025-11-23 07:58:41] 2025-11-23 12:57:40,640 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 07:58:41] 2025-11-23 12:57:40,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 07:58:41] 2025-11-23 12:57:40,648 | INFO     | fitting pss+swap vs Time
[2025-11-23 07:58:41] 2025-11-23 12:57:40,649 | INFO     | sum of square deviations: 23635919248.016537
[2025-11-23 07:58:41] 2025-11-23 12:57:40,653 | INFO     | sum of deviations: 398451586669.5278
[2025-11-23 07:58:41] 2025-11-23 12:57:40,653 | INFO     | mean x: 1763889683.6816037
[2025-11-23 07:58:41] 2025-11-23 12:57:40,653 | INFO     | mean y: 3431800.8113207547
[2025-11-23 07:58:41] 2025-11-23 12:57:40,653 | INFO     | intersect: -29732016006.319157
[2025-11-23 07:58:41] 2025-11-23 12:57:40,653 | INFO     | chi2: 4.770285034213312
[2025-11-23 07:58:41] 2025-11-23 12:57:40,654 | INFO     | sum of square deviations: 22809583052.849648
[2025-11-23 07:58:41] 2025-11-23 12:57:40,658 | INFO     | sum of deviations: 536911193293.1433
[2025-11-23 07:58:41] 2025-11-23 12:57:40,658 | INFO     | mean x: 1763889531.183771
[2025-11-23 07:58:41] 2025-11-23 12:57:40,658 | INFO     | mean y: 3457308.491646778
[2025-11-23 07:58:41] 2025-11-23 12:57:40,658 | INFO     | intersect: -41516461351.61049
[2025-11-23 07:58:41] 2025-11-23 12:57:40,658 | INFO     | chi2: 2.429769450846398
[2025-11-23 07:58:41] 2025-11-23 12:57:40,659 | INFO     | current chi2=2.429769450846398 (change=49.06448077170085 %)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,659 | INFO     | sum of square deviations: 22002735595.1788
[2025-11-23 07:58:41] 2025-11-23 12:57:40,663 | INFO     | sum of deviations: 561029487465.2562
[2025-11-23 07:58:41] 2025-11-23 12:57:40,663 | INFO     | mean x: 1763889378.6859903
[2025-11-23 07:58:41] 2025-11-23 12:57:40,663 | INFO     | mean y: 3461837.0096618356
[2025-11-23 07:58:41] 2025-11-23 12:57:40,663 | INFO     | intersect: -44972488984.598564
[2025-11-23 07:58:41] 2025-11-23 12:57:40,664 | INFO     | chi2: 2.2242581524906537
[2025-11-23 07:58:41] 2025-11-23 12:57:40,664 | INFO     | current chi2=2.2242581524906537 (change=8.458057544684138 %)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,664 | INFO     | right removable region: 413
[2025-11-23 07:58:41] 2025-11-23 12:57:40,664 | INFO     | sum of square deviations: 22809536082.84964
[2025-11-23 07:58:41] 2025-11-23 12:57:40,668 | INFO     | sum of deviations: 269578120295.4036
[2025-11-23 07:58:41] 2025-11-23 12:57:40,668 | INFO     | mean x: 1763889836.183771
[2025-11-23 07:58:41] 2025-11-23 12:57:40,668 | INFO     | mean y: 3455498.618138425
[2025-11-23 07:58:41] 2025-11-23 12:57:40,668 | INFO     | intersect: -20843356322.518314
[2025-11-23 07:58:41] 2025-11-23 12:57:40,669 | INFO     | chi2: 2.6658684575161864
[2025-11-23 07:58:41] 2025-11-23 12:57:40,669 | INFO     | current chi2=2.6658684575161864 (change=44.11511181415543 %)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,669 | INFO     | sum of square deviations: 22002666969.548306
[2025-11-23 07:58:41] 2025-11-23 12:57:40,673 | INFO     | sum of deviations: 237942793129.35974
[2025-11-23 07:58:41] 2025-11-23 12:57:40,673 | INFO     | mean x: 1763889988.683575
[2025-11-23 07:58:41] 2025-11-23 12:57:40,673 | INFO     | mean y: 3461470.5676328503
[2025-11-23 07:58:41] 2025-11-23 12:57:40,673 | INFO     | intersect: -19071722063.371964
[2025-11-23 07:58:41] 2025-11-23 12:57:40,674 | INFO     | chi2: 2.617995905899341
[2025-11-23 07:58:41] 2025-11-23 12:57:40,674 | INFO     | current chi2=2.617995905899341 (change=1.7957582071190688 %)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,674 | INFO     | left removable region: 20
[2025-11-23 07:58:41] 2025-11-23 12:57:40,675 | INFO     | sum of square deviations: 18821430988.06614
[2025-11-23 07:58:41] 2025-11-23 12:57:40,678 | INFO     | sum of deviations: 360492895657.8296
[2025-11-23 07:58:41] 2025-11-23 12:57:40,678 | INFO     | mean x: 1763889958.1882951
[2025-11-23 07:58:41] 2025-11-23 12:57:40,678 | INFO     | mean y: 3500346.745547074
[2025-11-23 07:58:41] 2025-11-23 12:57:40,678 | INFO     | intersect: -33780848943.81818
[2025-11-23 07:58:41] 2025-11-23 12:57:40,679 | INFO     | chi2: 0.04184284319104805
[2025-11-23 07:58:41] 2025-11-23 12:57:40,679 | INFO     | current memory leak: 19.15 B/s (using 393 data points, chi2=0.04)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,679 | INFO     | could have reported an average CPU frequency of 2405 MHz (18 samples)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,679 | INFO     | ..............................
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . Timing measurements:
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . get job = 0 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . initial setup = 2 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . payload setup = 7 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . stage-in = 0 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . payload execution = 25868 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . stage-out = 3 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | . log creation = 0 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,680 | INFO     | ..............................
[2025-11-23 07:58:41] 2025-11-23 12:57:40,761 | INFO     | 
[2025-11-23 07:58:41] 2025-11-23 12:57:40,761 | INFO     | job summary report
[2025-11-23 07:58:41] 2025-11-23 12:57:40,761 | INFO     | --------------------------------------------------
[2025-11-23 07:58:41] 2025-11-23 12:57:40,761 | INFO     | PanDA job id: 6895348863
[2025-11-23 07:58:41] 2025-11-23 12:57:40,761 | INFO     | task id: 47556137
[2025-11-23 07:58:41] 2025-11-23 12:57:40,761 | INFO     | errors: (none)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,762 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 07:58:41] 2025-11-23 12:57:40,762 | INFO     | pilot state: finished 
[2025-11-23 07:58:41] 2025-11-23 12:57:40,762 | INFO     | transexitcode: 0
[2025-11-23 07:58:41] 2025-11-23 12:57:40,762 | INFO     | exeerrorcode: 0
[2025-11-23 07:58:41] 2025-11-23 12:57:40,762 | INFO     | exeerrordiag: 
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | exitcode: 0
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | exitmsg: OK
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | cpuconsumptiontime: 296872 s
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | nevents: 1000
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | neventsw: 0
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | pid: 23765
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | pgrp: 23765
[2025-11-23 07:58:41] 2025-11-23 12:57:40,763 | INFO     | corecount: 12
[2025-11-23 07:58:41] 2025-11-23 12:57:40,764 | INFO     | event service: False
[2025-11-23 07:58:41] 2025-11-23 12:57:40,764 | INFO     | sizes: {0: 2298755, 5: 2299017, 11: 2299073, 25880: 2336366, 25884: 2345360, 25885: 2345416, 25892: 2345790}
[2025-11-23 07:58:41] 2025-11-23 12:57:40,764 | INFO     | --------------------------------------------------
[2025-11-23 07:58:41] 2025-11-23 12:57:40,764 | INFO     | 
[2025-11-23 07:58:41] 2025-11-23 12:57:40,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 07:58:41] 2025-11-23 12:57:40,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,791 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,791 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,791 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 07:58:41] 2025-11-23 12:57:40,791 | INFO     | job 6895348863 has completed (purged errors)
[2025-11-23 07:58:41] 2025-11-23 12:57:40,792 | INFO     | overall cleanup function is called
[2025-11-23 07:58:41] 2025-11-23 12:57:41,807 | INFO     | --- collectZombieJob: --- 10, [23765]
[2025-11-23 07:58:41] 2025-11-23 12:57:41,807 | INFO     | zombie collector waiting for pid 23765
[2025-11-23 07:58:41] 2025-11-23 12:57:41,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 07:58:41] 2025-11-23 12:57:41,808 | INFO     | collected zombie processes
[2025-11-23 07:58:41] 2025-11-23 12:57:41,808 | INFO     | will attempt to kill all subprocesses of pid=23765
[2025-11-23 07:58:41] 2025-11-23 12:57:41,899 | INFO     | process IDs to be killed: [23765] (in reverse order)
[2025-11-23 07:58:41] 2025-11-23 12:57:41,949 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 07:58:41] 2025-11-23 12:57:41,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 07:58:41] 2025-11-23 12:57:41,953 | INFO     | did not find any defunct processes belonging to 23765
[2025-11-23 07:58:41] 2025-11-23 12:57:41,956 | INFO     | did not find any defunct processes belonging to 23765
[2025-11-23 07:58:41] 2025-11-23 12:57:41,958 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 07:58:41] 2025-11-23 12:57:41,959 | INFO     | ready for new job
[2025-11-23 07:58:41] 2025-11-23 12:57:41,959 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 07:58:41] 2025-11-23 12:57:42,266 | INFO     | ***************************************
[2025-11-23 07:58:41] 2025-11-23 12:57:42,266 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 07:58:41] 2025-11-23 12:57:42,266 | INFO     | ***************************************
[2025-11-23 07:58:41] 2025-11-23 12:57:42,266 | INFO     | 
[2025-11-23 07:58:41] 2025-11-23 12:57:42,267 | INFO     | architecture information:
[2025-11-23 07:58:41] 2025-11-23 12:57:42,268 | INFO     | executing command: cat /etc/os-release
[2025-11-23 07:58:41] 2025-11-23 12:57:42,283 | INFO     | cat /etc/os-release:
[2025-11-23 07:58:41] NAME="CentOS Linux"
[2025-11-23 07:58:41] VERSION="7 (Core)"
[2025-11-23 07:58:41] ID="centos"
[2025-11-23 07:58:41] ID_LIKE="rhel fedora"
[2025-11-23 07:58:41] VERSION_ID="7"
[2025-11-23 07:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 07:58:41] ANSI_COLOR="0;31"
[2025-11-23 07:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 07:58:41] HOME_URL="https://www.centos.org/"
[2025-11-23 07:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 07:58:41] 
[2025-11-23 07:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 07:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 07:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:58:41] 
[2025-11-23 07:58:41] 2025-11-23 12:57:42,283 | INFO     | ***************************************
[2025-11-23 07:58:41] 2025-11-23 12:57:42,786 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 07:58:41] 2025-11-23 12:57:42,802 | INFO     | sufficient remaining disk space (28249686016 B)
[2025-11-23 07:58:41] 2025-11-23 12:57:42,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:58:41] 2025-11-23 12:57:42,802 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:58:41] 2025-11-23 12:57:42,802 | INFO     | update_server=False
[2025-11-23 07:58:41] 2025-11-23 12:57:42,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:58:41] 2025-11-23 12:57:42,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:58:41] 2025-11-23 12:57:42,803 | INFO     | aborting loop
[2025-11-23 07:58:41] 2025-11-23 12:57:43,221 | INFO     | all job control threads have been joined
[2025-11-23 07:58:41] 2025-11-23 12:57:43,421 | INFO     | all payload control threads have been joined
[2025-11-23 07:58:41] 2025-11-23 12:57:43,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:58:41] 2025-11-23 12:57:43,725 | INFO     | all data control threads have been joined
[2025-11-23 07:58:41] 2025-11-23 12:57:43,803 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:43,809 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:43,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,184 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,227 | INFO     | [job] control thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,244 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,270 | INFO     | [job] validate thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,385 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,423 | INFO     | [payload] control thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,444 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:44,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:58:41] 2025-11-23 12:57:44,731 | INFO     | [data] control thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:45,046 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:45,053 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:45,443 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:45,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:58:41] 2025-11-23 12:57:46,777 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:57:48,453 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:58:41] 2025-11-23 12:58:13,476 | INFO     | PID=17173 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 07:58:41] 2025-11-23 12:58:13,477 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:58:41] 2025-11-23 12:58:13,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:58:41] 2025-11-23 12:58:13,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:58:41] 2025-11-23 12:58:34,797 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:58:41] 2025-11-23 12:58:36,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423001597760)>', '<ExcThread(monitor, started 140422177339136)>']
[2025-11-23 07:58:41] 2025-11-23 12:58:37,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:58:41] 2025-11-23 12:58:37,596 | INFO     | [monitor] control thread has ended
[2025-11-23 07:58:41] 2025-11-23 12:58:41,651 | INFO     | all workflow threads have been joined
[2025-11-23 07:58:41] 2025-11-23 12:58:41,651 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:58:41] 2025-11-23 12:58:41,652 | INFO     | traces error code: 0
[2025-11-23 07:58:41] 2025-11-23 12:58:41,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:58:41] 2025-11-23 12:58:41,751 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:58:41] 2025-11-23 12:58:41,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:58:41] 2025-11-23 12:58:41,759 [wrapper] pilotpid: 17173
[2025-11-23 07:58:41] 2025-11-23 12:58:41,762 [wrapper] Pilot exit status: 0
[2025-11-23 07:58:41] 2025-11-23 12:58:41,777 [wrapper] pandaids: 6895348863
[2025-11-23 07:58:41] 2025-11-23 12:58:41,822 [wrapper] cleanup supervisor_pilot 32053 17174
[2025-11-23 07:58:41] 2025-11-23 12:58:41,826 [wrapper] Test setup, not cleaning
[2025-11-23 07:58:41] 2025-11-23 12:58:41,831 [wrapper] apfmon messages muted
[2025-11-23 07:58:41] 2025-11-23 12:58:41,835 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:58:41] 2025-11-23 12:58:41,839 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:58:41]  *** Error codes and diagnostics ***
[2025-11-23 07:58:41]     "exeErrorCode": 0,
[2025-11-23 07:58:41]     "exeErrorDiag": "",
[2025-11-23 07:58:41]     "pilotErrorCode": 0,
[2025-11-23 07:58:41]     "pilotErrorDiag": "",
[2025-11-23 07:58:41]  *** Listing of results directory ***
[2025-11-23 07:58:41] total 1310652
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:59 queuedata.json
[2025-11-23 07:58:41] -rwx------ 1 boincer umatlas     36292 Nov 22 15:00 runpilot2-wrapper.sh
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas       100 Nov 23 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:58:41] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 00:45 run_atlas
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas       105 Nov 23 00:45 job.xml
[2025-11-23 07:58:41] -rw-r--r-- 2 boincer umatlas 411604180 Nov 23 00:45 EVNT.47483658._000486.pool.root.1
[2025-11-23 07:58:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 00:45 start_atlas.sh
[2025-11-23 07:58:41] drwxrwx--x 2 boincer umatlas      4096 Nov 23 00:45 shared
[2025-11-23 07:58:41] -rw-r--r-- 2 boincer umatlas    590103 Nov 23 00:45 input.tar.gz
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas         0 Nov 23 00:45 boinc_lockfile
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 00:45 pandaJob.out
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas        57 Nov 23 00:45 setup.sh.local
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas    989784 Nov 23 00:45 agis_schedconf.cvmfs.json
[2025-11-23 07:58:41] drwx------ 5 boincer umatlas      4096 Nov 23 00:45 pilot3
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas       533 Nov 23 07:48 boinc_task_state.xml
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 07:55 init_data.xml
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas 914944927 Nov 23 07:56 HITS.47556137._004819.pool.root.1
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas      1061 Nov 23 07:57 memory_monitor_summary.json
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas   1526164 Nov 23 07:57 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas   2191130 Nov 23 07:57 log.47556137._004819.job.log.tgz.1
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas      8677 Nov 23 07:57 heartbeat.json
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas        95 Nov 23 07:58 pilot_heartbeat.json
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 07:58 boinc_mmap_file
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas        29 Nov 23 07:58 wrapper_checkpoint.txt
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas      4746 Nov 23 07:58 pilotlog.txt
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas   3625501 Nov 23 07:58 log.47556137._004819.job.log.1
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas       353 Nov 23 07:58 output.list
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas       620 Nov 23 07:58 runtime_log
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas   5836800 Nov 23 07:58 result.tar.gz
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 07:58 runtime_log.err
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas       670 Nov 23 07:58 bwFLDmix8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoGIKDmYuHlmn.diag
[2025-11-23 07:58:41] -rw-r--r-- 1 boincer umatlas     21321 Nov 23 07:58 stderr.txt
[2025-11-23 07:58:41] HITS file was successfully produced:
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas 914944927 Nov 23 07:56 shared/HITS.pool.root.1
[2025-11-23 07:58:41]  *** Contents of shared directory: ***
[2025-11-23 07:58:41] total 1301764
[2025-11-23 07:58:41] -rw-r--r-- 2 boincer umatlas 411604180 Nov 23 00:45 ATLAS.root_0
[2025-11-23 07:58:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 00:45 start_atlas.sh
[2025-11-23 07:58:41] -rw-r--r-- 2 boincer umatlas    590103 Nov 23 00:45 input.tar.gz
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas 914944927 Nov 23 07:56 HITS.pool.root.1
[2025-11-23 07:58:41] -rw------- 1 boincer umatlas   5836800 Nov 23 07:58 result.tar.gz
07:58:43 (13478): run_atlas exited; CPU time 289914.974771
07:58:43 (13478): called boinc_finish(0)

</stderr_txt>
]]>

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