Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:02:48 (2928): wrapper (7.7.26015): starting
01:02:48 (2928): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:02:48] Arguments: --nthreads 8
[2025-11-23 01:02:48] Threads: 8
[2025-11-23 01:02:48] Checking for CVMFS
[2025-11-23 01:02:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:02:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:02:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:02:48] 2.11.2.0 2804 35384 82168 153198 1 82 12057417 20275201 1 130560 0 3716986 99.364 2655558 28523 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 01:02:48] CVMFS is ok
[2025-11-23 01:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:02:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 01:02:48] Further information can be found at the LHC@home message board.
[2025-11-23 01:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:02:48] Checking for apptainer binary...
[2025-11-23 01:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:02:48] Running /usr/bin/apptainer --version
[2025-11-23 01:02:48] apptainer version 1.3.2-1.el7
[2025-11-23 01:02:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:02:50] c-204-3.aglt2.org
[2025-11-23 01:02:50] apptainer works
[2025-11-23 01:02:50] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:02:50] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:02:50] Starting ATLAS job with PandaID=6895330765
[2025-11-23 01:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 13:33:28]  *** The last 200 lines of the pilot log: ***
[2025-11-23 13:33:28] 2025-11-23 18:32:38,105 | INFO     | monitor loop #3302: job 0:6895330765 is in state 'finished'
[2025-11-23 13:33:28] 2025-11-23 18:32:38,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,811 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 13:33:28] 2025-11-23 18:32:39,815 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-23 13:33:28] 2025-11-23 18:32:39,818 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895330765/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,818 | INFO     | extracted standard info from prmon json
[2025-11-23 13:33:28] 2025-11-23 18:32:39,819 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 13:33:28] 2025-11-23 18:32:39,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 13:33:28] 2025-11-23 18:32:39,834 | INFO     | fitting pss+swap vs Time
[2025-11-23 13:33:28] 2025-11-23 18:32:39,835 | INFO     | sum of square deviations: 124131185601.1481
[2025-11-23 13:33:28] 2025-11-23 18:32:39,849 | INFO     | sum of deviations: 898025181637.8641
[2025-11-23 13:33:28] 2025-11-23 18:32:39,849 | INFO     | mean x: 1763900268.643148
[2025-11-23 13:33:28] 2025-11-23 18:32:39,849 | INFO     | mean y: 3283445.299864315
[2025-11-23 13:33:28] 2025-11-23 18:32:39,849 | INFO     | intersect: -12757626325.022102
[2025-11-23 13:33:28] 2025-11-23 18:32:39,850 | INFO     | chi2: 5.704864575635465
[2025-11-23 13:33:28] 2025-11-23 18:32:39,851 | INFO     | sum of square deviations: 121622018004.0651
[2025-11-23 13:33:28] 2025-11-23 18:32:39,864 | INFO     | sum of deviations: 1176901494572.7524
[2025-11-23 13:33:28] 2025-11-23 18:32:39,864 | INFO     | mean x: 1763900116.147541
[2025-11-23 13:33:28] 2025-11-23 18:32:39,864 | INFO     | mean y: 3300384.4467213117
[2025-11-23 13:33:28] 2025-11-23 18:32:39,864 | INFO     | intersect: -17065456712.658068
[2025-11-23 13:33:28] 2025-11-23 18:32:39,865 | INFO     | chi2: 2.57259091965762
[2025-11-23 13:33:28] 2025-11-23 18:32:39,866 | INFO     | current chi2=2.57259091965762 (change=54.905311325973784 %)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,867 | INFO     | sum of square deviations: 119146853027.2572
[2025-11-23 13:33:28] 2025-11-23 18:32:39,879 | INFO     | sum of deviations: 1201726401770.2349
[2025-11-23 13:33:28] 2025-11-23 18:32:39,879 | INFO     | mean x: 1763899963.650619
[2025-11-23 13:33:28] 2025-11-23 18:32:39,879 | INFO     | mean y: 3301904.591471802
[2025-11-23 13:33:28] 2025-11-23 18:32:39,879 | INFO     | intersect: -17787559562.10272
[2025-11-23 13:33:28] 2025-11-23 18:32:39,880 | INFO     | chi2: 2.44396825327368
[2025-11-23 13:33:28] 2025-11-23 18:32:39,880 | INFO     | current chi2=2.44396825327368 (change=4.999732580921109 %)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,881 | INFO     | right removable region: 726
[2025-11-23 13:33:28] 2025-11-23 18:32:39,881 | INFO     | sum of square deviations: 121621728864.06511
[2025-11-23 13:33:28] 2025-11-23 18:32:39,894 | INFO     | sum of deviations: 664938171283.9843
[2025-11-23 13:33:28] 2025-11-23 18:32:39,895 | INFO     | mean x: 1763900421.147541
[2025-11-23 13:33:28] 2025-11-23 18:32:39,895 | INFO     | mean y: 3297588.2131147543
[2025-11-23 13:33:28] 2025-11-23 18:32:39,895 | INFO     | intersect: -9640412720.129995
[2025-11-23 13:33:28] 2025-11-23 18:32:39,896 | INFO     | chi2: 3.43317740957351
[2025-11-23 13:33:28] 2025-11-23 18:32:39,896 | INFO     | current chi2=3.43317740957351 (change=39.82017690242738 %)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,897 | INFO     | sum of square deviations: 119146453111.85428
[2025-11-23 13:33:28] 2025-11-23 18:32:39,910 | INFO     | sum of deviations: 615635110521.3162
[2025-11-23 13:33:28] 2025-11-23 18:32:39,910 | INFO     | mean x: 1763900573.647868
[2025-11-23 13:33:28] 2025-11-23 18:32:39,910 | INFO     | mean y: 3300624.4621733148
[2025-11-23 13:33:28] 2025-11-23 18:32:39,910 | INFO     | intersect: -9110853395.606398
[2025-11-23 13:33:28] 2025-11-23 18:32:39,911 | INFO     | chi2: 3.38885778829415
[2025-11-23 13:33:28] 2025-11-23 18:32:39,911 | INFO     | current chi2=3.38885778829415 (change=1.290921382500457 %)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,911 | INFO     | left removable region: 20
[2025-11-23 13:33:28] 2025-11-23 18:32:39,912 | INFO     | sum of square deviations: 109117134598.17123
[2025-11-23 13:33:28] 2025-11-23 18:32:39,924 | INFO     | sum of deviations: 844555525971.8453
[2025-11-23 13:33:28] 2025-11-23 18:32:39,924 | INFO     | mean x: 1763900543.154391
[2025-11-23 13:33:28] 2025-11-23 18:32:39,924 | INFO     | mean y: 3324073.4050991503
[2025-11-23 13:33:28] 2025-11-23 18:32:39,924 | INFO     | intersect: -13649086764.468454
[2025-11-23 13:33:28] 2025-11-23 18:32:39,925 | INFO     | chi2: 0.07494090310542874
[2025-11-23 13:33:28] 2025-11-23 18:32:39,925 | INFO     | current memory leak: 7.74 B/s (using 706 data points, chi2=0.07)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,926 | INFO     | could have reported an average CPU frequency of 2175 MHz (28 samples)
[2025-11-23 13:33:28] 2025-11-23 18:32:39,926 | INFO     | ..............................
[2025-11-23 13:33:28] 2025-11-23 18:32:39,926 | INFO     | . Timing measurements:
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . get job = 0 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . initial setup = 2 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . payload setup = 9 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . stage-in = 0 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . payload execution = 44928 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . stage-out = 4 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | . log creation = 0 s
[2025-11-23 13:33:28] 2025-11-23 18:32:39,927 | INFO     | ..............................
[2025-11-23 13:33:28] 2025-11-23 18:32:40,019 | INFO     | time since job start (44972s) is within the limit (172800.0s)
[2025-11-23 13:33:28] 2025-11-23 18:32:40,048 | INFO     | 
[2025-11-23 13:33:28] 2025-11-23 18:32:40,049 | INFO     | job summary report
[2025-11-23 13:33:28] 2025-11-23 18:32:40,049 | INFO     | --------------------------------------------------
[2025-11-23 13:33:28] 2025-11-23 18:32:40,049 | INFO     | PanDA job id: 6895330765
[2025-11-23 13:33:28] 2025-11-23 18:32:40,049 | INFO     | task id: 47556149
[2025-11-23 13:33:28] 2025-11-23 18:32:40,049 | INFO     | errors: (none)
[2025-11-23 13:33:28] 2025-11-23 18:32:40,049 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 13:33:28] 2025-11-23 18:32:40,050 | INFO     | pilot state: finished 
[2025-11-23 13:33:28] 2025-11-23 18:32:40,050 | INFO     | transexitcode: 0
[2025-11-23 13:33:28] 2025-11-23 18:32:40,050 | INFO     | exeerrorcode: 0
[2025-11-23 13:33:28] 2025-11-23 18:32:40,050 | INFO     | exeerrordiag: 
[2025-11-23 13:33:28] 2025-11-23 18:32:40,050 | INFO     | exitcode: 0
[2025-11-23 13:33:28] 2025-11-23 18:32:40,051 | INFO     | exitmsg: OK
[2025-11-23 13:33:28] 2025-11-23 18:32:40,051 | INFO     | cpuconsumptiontime: 348328 s
[2025-11-23 13:33:28] 2025-11-23 18:32:40,051 | INFO     | nevents: 1000
[2025-11-23 13:33:28] 2025-11-23 18:32:40,051 | INFO     | neventsw: 0
[2025-11-23 13:33:28] 2025-11-23 18:32:40,051 | INFO     | pid: 13173
[2025-11-23 13:33:28] 2025-11-23 18:32:40,051 | INFO     | pgrp: 13173
[2025-11-23 13:33:28] 2025-11-23 18:32:40,052 | INFO     | corecount: 8
[2025-11-23 13:33:28] 2025-11-23 18:32:40,052 | INFO     | event service: False
[2025-11-23 13:33:28] 2025-11-23 18:32:40,052 | INFO     | sizes: {0: 2297977, 1: 2298833, 7: 2299095, 12: 2299123, 44941: 2345019, 44945: 2354013, 44947: 2354197, 44954: 2354443}
[2025-11-23 13:33:28] 2025-11-23 18:32:40,052 | INFO     | --------------------------------------------------
[2025-11-23 13:33:28] 2025-11-23 18:32:40,052 | INFO     | 
[2025-11-23 13:33:28] 2025-11-23 18:32:40,053 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 13:33:28] 2025-11-23 18:32:40,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 13:33:28] 2025-11-23 18:32:40,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,123 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 13:33:28] 2025-11-23 18:32:40,123 | INFO     | job 6895330765 has completed (purged errors)
[2025-11-23 13:33:28] 2025-11-23 18:32:40,123 | INFO     | overall cleanup function is called
[2025-11-23 13:33:28] 2025-11-23 18:32:41,134 | INFO     | --- collectZombieJob: --- 10, [13173]
[2025-11-23 13:33:28] 2025-11-23 18:32:41,135 | INFO     | zombie collector waiting for pid 13173
[2025-11-23 13:33:28] 2025-11-23 18:32:41,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 13:33:28] 2025-11-23 18:32:41,135 | INFO     | collected zombie processes
[2025-11-23 13:33:28] 2025-11-23 18:32:41,135 | INFO     | will attempt to kill all subprocesses of pid=13173
[2025-11-23 13:33:28] 2025-11-23 18:32:41,230 | INFO     | process IDs to be killed: [13173] (in reverse order)
[2025-11-23 13:33:28] 2025-11-23 18:32:41,286 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 13:33:28] 2025-11-23 18:32:41,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 13:33:28] 2025-11-23 18:32:41,291 | INFO     | did not find any defunct processes belonging to 13173
[2025-11-23 13:33:28] 2025-11-23 18:32:41,295 | INFO     | did not find any defunct processes belonging to 13173
[2025-11-23 13:33:28] 2025-11-23 18:32:41,297 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 13:33:28] 2025-11-23 18:32:41,298 | INFO     | ready for new job
[2025-11-23 13:33:28] 2025-11-23 18:32:41,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 13:33:28] 2025-11-23 18:32:41,301 | INFO     | ***************************************
[2025-11-23 13:33:28] 2025-11-23 18:32:41,302 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 13:33:28] 2025-11-23 18:32:41,302 | INFO     | ***************************************
[2025-11-23 13:33:28] 2025-11-23 18:32:41,302 | INFO     | 
[2025-11-23 13:33:28] 2025-11-23 18:32:41,302 | INFO     | architecture information:
[2025-11-23 13:33:28] 2025-11-23 18:32:41,303 | INFO     | executing command: cat /etc/os-release
[2025-11-23 13:33:28] 2025-11-23 18:32:41,323 | INFO     | cat /etc/os-release:
[2025-11-23 13:33:28] NAME="CentOS Linux"
[2025-11-23 13:33:28] VERSION="7 (Core)"
[2025-11-23 13:33:28] ID="centos"
[2025-11-23 13:33:28] ID_LIKE="rhel fedora"
[2025-11-23 13:33:28] VERSION_ID="7"
[2025-11-23 13:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 13:33:28] ANSI_COLOR="0;31"
[2025-11-23 13:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 13:33:28] HOME_URL="https://www.centos.org/"
[2025-11-23 13:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 13:33:28] 
[2025-11-23 13:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 13:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 13:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 13:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 13:33:28] 
[2025-11-23 13:33:28] 2025-11-23 18:32:41,323 | INFO     | ***************************************
[2025-11-23 13:33:28] 2025-11-23 18:32:41,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 13:33:28] 2025-11-23 18:32:41,848 | INFO     | sufficient remaining disk space (17464033280 B)
[2025-11-23 13:33:28] 2025-11-23 18:32:41,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 13:33:28] 2025-11-23 18:32:41,849 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 13:33:28] 2025-11-23 18:32:41,849 | INFO     | update_server=False
[2025-11-23 13:33:28] 2025-11-23 18:32:41,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 13:33:28] 2025-11-23 18:32:41,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:33:28] 2025-11-23 18:32:41,851 | INFO     | aborting loop
[2025-11-23 13:33:28] 2025-11-23 18:32:41,851 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 13:33:28] 2025-11-23 18:32:41,851 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 13:33:28] 2025-11-23 18:32:41,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 13:33:28] 2025-11-23 18:32:41,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 13:33:28] 2025-11-23 18:32:41,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 13:33:28] 2025-11-23 18:32:41,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:33:28] 2025-11-23 18:32:42,305 | INFO     | all payload control threads have been joined
[2025-11-23 13:33:28] 2025-11-23 18:32:42,317 | INFO     | all data control threads have been joined
[2025-11-23 13:33:28] 2025-11-23 18:32:42,856 | INFO     | [job] retrieve thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:42,856 | INFO     | [job] job monitor thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:42,861 | INFO     | [job] queue monitor thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,215 | INFO     | all job control threads have been joined
[2025-11-23 13:33:28] 2025-11-23 18:32:43,253 | INFO     | [job] validate thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,271 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,310 | INFO     | [payload] control thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,322 | INFO     | [data] control thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,355 | INFO     | [payload] failed_post thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 13:33:28] 2025-11-23 18:32:43,691 | INFO     | [payload] validate_post thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,824 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:43,863 | INFO     | [data] copytool_out thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:44,042 | INFO     | [data] copytool_in thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:44,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:44,142 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:44,221 | INFO     | [job] control thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:32:47,398 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 13:33:28] 2025-11-23 18:33:11,239 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-23 13:33:28] 2025-11-23 18:33:22,178 | INFO     | [monitor] cgroup control has ended
[2025-11-23 13:33:28] 2025-11-23 18:33:22,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567331047232)>', '<ExcThread(monitor, started 140566729832192)>']
[2025-11-23 13:33:28] 2025-11-23 18:33:23,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 13:33:28] 2025-11-23 18:33:23,029 | INFO     | [monitor] control thread has ended
[2025-11-23 13:33:28] 2025-11-23 18:33:27,789 | INFO     | all workflow threads have been joined
[2025-11-23 13:33:28] 2025-11-23 18:33:27,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 13:33:28] 2025-11-23 18:33:27,790 | INFO     | traces error code: 0
[2025-11-23 13:33:28] 2025-11-23 18:33:27,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 13:33:28] 2025-11-23 18:33:27,917 [wrapper] ==== pilot stdout END ====
[2025-11-23 13:33:28] 2025-11-23 18:33:27,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 13:33:28] 2025-11-23 18:33:27,926 [wrapper] pilotpid: 6778
[2025-11-23 13:33:28] 2025-11-23 18:33:27,930 [wrapper] Pilot exit status: 0
[2025-11-23 13:33:28] 2025-11-23 18:33:27,946 [wrapper] pandaids: 6895330765
[2025-11-23 13:33:28] 2025-11-23 18:33:28,000 [wrapper] cleanup supervisor_pilot 14466 6779
[2025-11-23 13:33:28] 2025-11-23 18:33:28,005 [wrapper] Test setup, not cleaning
[2025-11-23 13:33:28] 2025-11-23 18:33:28,011 [wrapper] apfmon messages muted
[2025-11-23 13:33:28] 2025-11-23 18:33:28,016 [wrapper] ==== wrapper stdout END ====
[2025-11-23 13:33:28] 2025-11-23 18:33:28,020 [wrapper] ==== wrapper stderr END ====
[2025-11-23 13:33:28]  *** Error codes and diagnostics ***
[2025-11-23 13:33:28]     "exeErrorCode": 0,
[2025-11-23 13:33:28]     "exeErrorDiag": "",
[2025-11-23 13:33:28]     "pilotErrorCode": 0,
[2025-11-23 13:33:28]     "pilotErrorDiag": "",
[2025-11-23 13:33:28]  *** Listing of results directory ***
[2025-11-23 13:33:28] total 1323200
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 16:26 pilot3.tar.gz
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 16:39 queuedata.json
[2025-11-23 13:33:28] -rwx------ 1 boincer umatlas     36292 Nov 21 16:40 runpilot2-wrapper.sh
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas       100 Nov 23 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 13:33:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 01:02 run_atlas
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas       105 Nov 23 01:02 job.xml
[2025-11-23 13:33:28] -rw-r--r-- 2 boincer umatlas 410536210 Nov 23 01:02 EVNT.47483658._001043.pool.root.1
[2025-11-23 13:33:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:02 start_atlas.sh
[2025-11-23 13:33:28] drwxrwx--x 2 boincer umatlas      4096 Nov 23 01:02 shared
[2025-11-23 13:33:28] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 01:02 input.tar.gz
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas         0 Nov 23 01:02 boinc_lockfile
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 01:02 pandaJob.out
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas        57 Nov 23 01:02 setup.sh.local
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas    989784 Nov 23 01:03 agis_schedconf.cvmfs.json
[2025-11-23 13:33:28] drwx------ 5 boincer umatlas      4096 Nov 23 01:03 pilot3
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas       532 Nov 23 13:24 boinc_task_state.xml
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 13:27 init_data.xml
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas 924153570 Nov 23 13:31 HITS.47556149._000300.pool.root.1
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas      1062 Nov 23 13:32 memory_monitor_summary.json
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas        95 Nov 23 13:32 pilot_heartbeat.json
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas   1526164 Nov 23 13:32 agis_ddmendpoints.agis.ALL.json
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas   1981452 Nov 23 13:32 log.47556149._000300.job.log.tgz.1
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas      8653 Nov 23 13:32 heartbeat.json
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 13:33 boinc_mmap_file
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas        29 Nov 23 13:33 wrapper_checkpoint.txt
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas      4552 Nov 23 13:33 pilotlog.txt
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas   6189106 Nov 23 13:33 log.47556149._000300.job.log.1
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas       353 Nov 23 13:33 output.list
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas       620 Nov 23 13:33 runtime_log
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas   8192000 Nov 23 13:33 result.tar.gz
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 13:33 runtime_log.err
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas       667 Nov 23 13:33 dSFKDmj2ng8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEjJKDmVX9nQm.diag
[2025-11-23 13:33:28] -rw-r--r-- 1 boincer umatlas     21195 Nov 23 13:33 stderr.txt
[2025-11-23 13:33:28] HITS file was successfully produced:
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas 924153570 Nov 23 13:31 shared/HITS.pool.root.1
[2025-11-23 13:33:28]  *** Contents of shared directory: ***
[2025-11-23 13:33:28] total 1312012
[2025-11-23 13:33:28] -rw-r--r-- 2 boincer umatlas 410536210 Nov 23 01:02 ATLAS.root_0
[2025-11-23 13:33:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:02 start_atlas.sh
[2025-11-23 13:33:28] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 01:02 input.tar.gz
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas 924153570 Nov 23 13:31 HITS.pool.root.1
[2025-11-23 13:33:28] -rw------- 1 boincer umatlas   8192000 Nov 23 13:33 result.tar.gz
13:33:29 (2928): run_atlas exited; CPU time 346008.542464
13:33:29 (2928): called boinc_finish(0)

</stderr_txt>
]]>

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