Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:59:47 (3105382): wrapper (7.7.26015): starting
00:59:47 (3105382): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:59:47] Arguments: --nthreads 12
[2025-11-23 00:59:47] Threads: 12
[2025-11-23 00:59:47] Checking for CVMFS
[2025-11-23 00:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:59:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:59:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:59:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:59:51] 2.8.1.0 3105643 0 30200 153198 3 1 3503368 4096000 0 130560 0 0 0.000 1292 722 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 00:59:51] CVMFS is ok
[2025-11-23 00:59:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:59:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:59:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 00:59:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 00:59:51] Further information can be found at the LHC@home message board.
[2025-11-23 00:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:59:51] Checking for apptainer binary...
[2025-11-23 00:59:51] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-23 00:59:51] apptainer is not installed, using version from CVMFS
[2025-11-23 00:59:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:59:52] farmville.blisteringsheep.pec
[2025-11-23 00:59:52] apptainer works
[2025-11-23 00:59:52] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:59:52] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:59:52] Starting ATLAS job with PandaID=6893875912
[2025-11-23 00:59:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 04:39:39]  *** The last 200 lines of the pilot log: ***
[2025-11-23 04:39:39] 2025-11-23 09:38:47,141 | INFO     | monitor loop #975: job 0:6893875912 is in state 'finished'
[2025-11-23 04:39:39] 2025-11-23 09:38:47,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:39:39] 2025-11-23 09:38:47,604 | INFO     | time since job start (13113s) is within the limit (172800.0s)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,405 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 04:39:39] 2025-11-23 09:38:49,410 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2439.726729166667
[2025-11-23 04:39:39] 2025-11-23 09:38:49,417 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893875912/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,418 | INFO     | extracted standard info from prmon json
[2025-11-23 04:39:39] 2025-11-23 09:38:49,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 04:39:39] 2025-11-23 09:38:49,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 04:39:39] 2025-11-23 09:38:49,422 | INFO     | fitting pss+swap vs Time
[2025-11-23 04:39:39] 2025-11-23 09:38:49,422 | INFO     | sum of square deviations: 3081841687.0232644
[2025-11-23 04:39:39] 2025-11-23 09:38:49,424 | INFO     | sum of deviations: 142349807414.13947
[2025-11-23 04:39:39] 2025-11-23 09:38:49,424 | INFO     | mean x: 1763884166.4418604
[2025-11-23 04:39:39] 2025-11-23 09:38:49,424 | INFO     | mean y: 3521089.6511627906
[2025-11-23 04:39:39] 2025-11-23 09:38:49,424 | INFO     | intersect: -81470025215.8289
[2025-11-23 04:39:39] 2025-11-23 09:38:49,424 | INFO     | chi2: 5.069153880305245
[2025-11-23 04:39:39] 2025-11-23 09:38:49,425 | INFO     | sum of square deviations: 2871829513.5238085
[2025-11-23 04:39:39] 2025-11-23 09:38:49,426 | INFO     | sum of deviations: 215558600483.09515
[2025-11-23 04:39:39] 2025-11-23 09:38:49,426 | INFO     | mean x: 1763884013.952381
[2025-11-23 04:39:39] 2025-11-23 09:38:49,426 | INFO     | mean y: 3573979.1095238095
[2025-11-23 04:39:39] 2025-11-23 09:38:49,426 | INFO     | intersect: -132392993321.13364
[2025-11-23 04:39:39] 2025-11-23 09:38:49,427 | INFO     | chi2: 2.4545113759127135
[2025-11-23 04:39:39] 2025-11-23 09:38:49,427 | INFO     | current chi2=2.4545113759127135 (change=51.57946604365239 %)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,427 | INFO     | sum of square deviations: 2671584964.9756093
[2025-11-23 04:39:39] 2025-11-23 09:38:49,428 | INFO     | sum of deviations: 208024293500.0245
[2025-11-23 04:39:39] 2025-11-23 09:38:49,428 | INFO     | mean x: 1763883861.4634147
[2025-11-23 04:39:39] 2025-11-23 09:38:49,428 | INFO     | mean y: 3568208.3365853657
[2025-11-23 04:39:39] 2025-11-23 09:38:49,429 | INFO     | intersect: -137342126915.52107
[2025-11-23 04:39:39] 2025-11-23 09:38:49,429 | INFO     | chi2: 2.439014920542984
[2025-11-23 04:39:39] 2025-11-23 09:38:49,429 | INFO     | current chi2=2.439014920542984 (change=0.6313458361531235 %)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,429 | INFO     | right removable region: 204
[2025-11-23 04:39:39] 2025-11-23 09:38:49,429 | INFO     | sum of square deviations: 2871771563.5238085
[2025-11-23 04:39:39] 2025-11-23 09:38:49,431 | INFO     | sum of deviations: 67359049108.95239
[2025-11-23 04:39:39] 2025-11-23 09:38:49,431 | INFO     | mean x: 1763884318.952381
[2025-11-23 04:39:39] 2025-11-23 09:38:49,431 | INFO     | mean y: 3575265.6952380952
[2025-11-23 04:39:39] 2025-11-23 09:38:49,431 | INFO     | intersect: -41369343100.079735
[2025-11-23 04:39:39] 2025-11-23 09:38:49,431 | INFO     | chi2: 2.7691504911322644
[2025-11-23 04:39:39] 2025-11-23 09:38:49,431 | INFO     | current chi2=2.7691504911322644 (change=45.372530475134894 %)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,432 | INFO     | sum of square deviations: 2671507494.7121806
[2025-11-23 04:39:39] 2025-11-23 09:38:49,433 | INFO     | sum of deviations: 49880730458.91699
[2025-11-23 04:39:39] 2025-11-23 09:38:49,433 | INFO     | mean x: 1763884471.4487805
[2025-11-23 04:39:39] 2025-11-23 09:38:49,433 | INFO     | mean y: 3588541.468292683
[2025-11-23 04:39:39] 2025-11-23 09:38:49,433 | INFO     | intersect: -32930567943.27141
[2025-11-23 04:39:39] 2025-11-23 09:38:49,433 | INFO     | chi2: 2.7190763641965705
[2025-11-23 04:39:39] 2025-11-23 09:38:49,434 | INFO     | current chi2=2.7190763641965705 (change=1.8082847825009085 %)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,434 | INFO     | left removable region: 20
[2025-11-23 04:39:39] 2025-11-23 09:38:49,434 | INFO     | sum of square deviations: 1931825515.9130356
[2025-11-23 04:39:39] 2025-11-23 09:38:49,435 | INFO     | sum of deviations: 91986332661.17392
[2025-11-23 04:39:39] 2025-11-23 09:38:49,435 | INFO     | mean x: 1763884440.9782608
[2025-11-23 04:39:39] 2025-11-23 09:38:49,435 | INFO     | mean y: 3661835.7934782607
[2025-11-23 04:39:39] 2025-11-23 09:38:49,435 | INFO     | intersect: -83985942622.35532
[2025-11-23 04:39:39] 2025-11-23 09:38:49,436 | INFO     | chi2: 0.01839855428899581
[2025-11-23 04:39:39] 2025-11-23 09:38:49,436 | INFO     | current memory leak: 47.62 B/s (using 184 data points, chi2=0.02)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,436 | INFO     | could have reported an average CPU frequency of 2769 MHz (11 samples)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | ..............................
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . Timing measurements:
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . get job = 0 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . initial setup = 3 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . payload setup = 5 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . stage-in = 0 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . payload execution = 13079 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . stage-out = 3 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | . log creation = 0 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,437 | INFO     | ..............................
[2025-11-23 04:39:39] 2025-11-23 09:38:49,496 | INFO     | 
[2025-11-23 04:39:39] 2025-11-23 09:38:49,496 | INFO     | job summary report
[2025-11-23 04:39:39] 2025-11-23 09:38:49,496 | INFO     | --------------------------------------------------
[2025-11-23 04:39:39] 2025-11-23 09:38:49,496 | INFO     | PanDA job id: 6893875912
[2025-11-23 04:39:39] 2025-11-23 09:38:49,496 | INFO     | task id: 47523449
[2025-11-23 04:39:39] 2025-11-23 09:38:49,496 | INFO     | errors: (none)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | pilot state: finished 
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | transexitcode: 0
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | exeerrorcode: 0
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | exeerrordiag: 
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | exitcode: 0
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | exitmsg: OK
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | cpuconsumptiontime: 151985 s
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | nevents: 1000
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | neventsw: 0
[2025-11-23 04:39:39] 2025-11-23 09:38:49,497 | INFO     | pid: 3117461
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | pgrp: 3117461
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | corecount: 12
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | event service: False
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | sizes: {0: 2298756, 3: 2299018, 11: 2299046, 13087: 2330120, 13088: 2330119, 13092: 2339169, 13095: 2339353, 13099: 2339599}
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | --------------------------------------------------
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | 
[2025-11-23 04:39:39] 2025-11-23 09:38:49,498 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-23 04:39:39] 2025-11-23 09:38:49,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | job 6893875912 has completed (purged errors)
[2025-11-23 04:39:39] 2025-11-23 09:38:49,514 | INFO     | overall cleanup function is called
[2025-11-23 04:39:39] 2025-11-23 09:38:50,532 | INFO     | --- collectZombieJob: --- 10, [3117461]
[2025-11-23 04:39:39] 2025-11-23 09:38:50,532 | INFO     | zombie collector waiting for pid 3117461
[2025-11-23 04:39:39] 2025-11-23 09:38:50,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 04:39:39] 2025-11-23 09:38:50,532 | INFO     | collected zombie processes
[2025-11-23 04:39:39] 2025-11-23 09:38:50,532 | INFO     | will attempt to kill all subprocesses of pid=3117461
[2025-11-23 04:39:39] 2025-11-23 09:38:50,691 | INFO     | process IDs to be killed: [3117461] (in reverse order)
[2025-11-23 04:39:39] 2025-11-23 09:38:50,727 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 04:39:39] 2025-11-23 09:38:50,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 04:39:39] 2025-11-23 09:38:50,731 | INFO     | did not find any defunct processes belonging to 3117461
[2025-11-23 04:39:39] 2025-11-23 09:38:50,733 | INFO     | did not find any defunct processes belonging to 3117461
[2025-11-23 04:39:39] 2025-11-23 09:38:50,734 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 04:39:39] 2025-11-23 09:38:50,734 | INFO     | ready for new job
[2025-11-23 04:39:39] 2025-11-23 09:38:50,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 04:39:39] 2025-11-23 09:38:50,736 | INFO     | ***************************************
[2025-11-23 04:39:39] 2025-11-23 09:38:50,736 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 04:39:39] 2025-11-23 09:38:50,736 | INFO     | ***************************************
[2025-11-23 04:39:39] 2025-11-23 09:38:50,736 | INFO     | 
[2025-11-23 04:39:39] 2025-11-23 09:38:50,737 | INFO     | architecture information:
[2025-11-23 04:39:39] 2025-11-23 09:38:50,737 | INFO     | executing command: cat /etc/os-release
[2025-11-23 04:39:39] 2025-11-23 09:38:50,746 | INFO     | cat /etc/os-release:
[2025-11-23 04:39:39] NAME="CentOS Linux"
[2025-11-23 04:39:39] VERSION="7 (Core)"
[2025-11-23 04:39:39] ID="centos"
[2025-11-23 04:39:39] ID_LIKE="rhel fedora"
[2025-11-23 04:39:39] VERSION_ID="7"
[2025-11-23 04:39:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 04:39:39] ANSI_COLOR="0;31"
[2025-11-23 04:39:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 04:39:39] HOME_URL="https://www.centos.org/"
[2025-11-23 04:39:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 04:39:39] 
[2025-11-23 04:39:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 04:39:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 04:39:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 04:39:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 04:39:39] 
[2025-11-23 04:39:39] 2025-11-23 09:38:50,746 | INFO     | ***************************************
[2025-11-23 04:39:39] 2025-11-23 09:38:51,249 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-23 04:39:39] 2025-11-23 09:38:51,258 | INFO     | sufficient remaining disk space (342152445952 B)
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | INFO     | update_server=False
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 04:39:39] 2025-11-23 09:38:51,259 | INFO     | aborting loop
[2025-11-23 04:39:39] 2025-11-23 09:38:51,444 | INFO     | all data control threads have been joined
[2025-11-23 04:39:39] 2025-11-23 09:38:52,157 | INFO     | all payload control threads have been joined
[2025-11-23 04:39:39] 2025-11-23 09:38:52,264 | INFO     | [job] retrieve thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:52,264 | INFO     | [job] queue monitor thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:52,265 | INFO     | [job] job monitor thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:52,287 | INFO     | all job control threads have been joined
[2025-11-23 04:39:39] 2025-11-23 09:38:52,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 04:39:39] 2025-11-23 09:38:52,449 | INFO     | [data] control thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,061 | INFO     | [payload] validate_post thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,096 | INFO     | [job] validate thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,163 | INFO     | [payload] control thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,293 | INFO     | [job] control thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,362 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,515 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,609 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,632 | INFO     | [payload] failed_post thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:53,691 | INFO     | [data] copytool_in thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:54,426 | INFO     | [data] copytool_out thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:38:55,266 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:39:01,529 | INFO     | job.realtimelogging is not enabled
[2025-11-23 04:39:39] 2025-11-23 09:39:02,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 04:39:39] 2025-11-23 09:39:20,839 | INFO     | PID=3110235 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 04:39:39] 2025-11-23 09:39:20,839 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 04:39:39] 2025-11-23 09:39:20,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 04:39:39] 2025-11-23 09:39:20,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 04:39:39] 2025-11-23 09:39:33,355 | INFO     | [monitor] cgroup control has ended
[2025-11-23 04:39:39] 2025-11-23 09:39:34,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753128036160)>', '<ExcThread(monitor, started 139752439269120)>']
[2025-11-23 04:39:39] 2025-11-23 09:39:34,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 04:39:39] 2025-11-23 09:39:34,910 | INFO     | [monitor] control thread has ended
[2025-11-23 04:39:39] 2025-11-23 09:39:39,573 | INFO     | all workflow threads have been joined
[2025-11-23 04:39:39] 2025-11-23 09:39:39,573 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 04:39:39] 2025-11-23 09:39:39,573 | INFO     | traces error code: 0
[2025-11-23 04:39:39] 2025-11-23 09:39:39,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 04:39:39] 2025-11-23 09:39:39,650 [wrapper] ==== pilot stdout END ====
[2025-11-23 04:39:39] 2025-11-23 09:39:39,652 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 04:39:39] 2025-11-23 09:39:39,653 [wrapper] pilotpid: 3110235
[2025-11-23 04:39:39] 2025-11-23 09:39:39,655 [wrapper] Pilot exit status: 0
[2025-11-23 04:39:39] 2025-11-23 09:39:39,660 [wrapper] pandaids: 6893875912
[2025-11-23 04:39:39] 2025-11-23 09:39:39,685 [wrapper] cleanup supervisor_pilot 3394736 3110236
[2025-11-23 04:39:39] 2025-11-23 09:39:39,686 [wrapper] Test setup, not cleaning
[2025-11-23 04:39:39] 2025-11-23 09:39:39,688 [wrapper] apfmon messages muted
[2025-11-23 04:39:39] 2025-11-23 09:39:39,690 [wrapper] ==== wrapper stdout END ====
[2025-11-23 04:39:39] 2025-11-23 09:39:39,691 [wrapper] ==== wrapper stderr END ====
[2025-11-23 04:39:39]  *** Error codes and diagnostics ***
[2025-11-23 04:39:39]     "exeErrorCode": 0,
[2025-11-23 04:39:39]     "exeErrorDiag": "",
[2025-11-23 04:39:39]     "pilotErrorCode": 0,
[2025-11-23 04:39:39]     "pilotErrorDiag": "",
[2025-11-23 04:39:39]  *** Listing of results directory ***
[2025-11-23 04:39:39] total 1308060
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-23 04:39:39] -rwx------ 1 boinc boinc     36292 Nov 20 11:53 runpilot2-wrapper.sh
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:53 queuedata.json
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc       100 Nov 23 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 04:39:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 00:59 run_atlas
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc       105 Nov 23 00:59 job.xml
[2025-11-23 04:39:39] -rw-r--r-- 2 boinc boinc 410748808 Nov 23 00:59 EVNT.47493127._000750.pool.root.1
[2025-11-23 04:39:39] drwxrwx--x 1 boinc boinc        76 Nov 23 00:59 shared
[2025-11-23 04:39:39] -rw-r--r-- 2 boinc boinc    590096 Nov 23 00:59 input.tar.gz
[2025-11-23 04:39:39] -rw-r--r-- 2 boinc boinc     15847 Nov 23 00:59 start_atlas.sh
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc         0 Nov 23 00:59 boinc_setup_complete
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc      9256 Nov 23 00:59 init_data.xml
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc         0 Nov 23 00:59 boinc_lockfile
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc      2785 Nov 23 00:59 pandaJob.out
[2025-11-23 04:39:39] -rw------- 1 boinc boinc    989784 Nov 23 01:00 agis_schedconf.cvmfs.json
[2025-11-23 04:39:39] drwx------ 1 boinc boinc       414 Nov 23 01:00 pilot3
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc       532 Nov 23 04:33 boinc_task_state.xml
[2025-11-23 04:39:39] -rw------- 1 boinc boinc 917049650 Nov 23 04:38 HITS.47523449._007494.pool.root.1
[2025-11-23 04:39:39] -rw------- 1 boinc boinc      1051 Nov 23 04:38 memory_monitor_summary.json
[2025-11-23 04:39:39] -rw------- 1 boinc boinc   1526164 Nov 23 04:38 agis_ddmendpoints.agis.ALL.json
[2025-11-23 04:39:39] -rw------- 1 boinc boinc   2030940 Nov 23 04:38 log.47523449._007494.job.log.tgz.1
[2025-11-23 04:39:39] -rw------- 1 boinc boinc      8631 Nov 23 04:38 heartbeat.json
[2025-11-23 04:39:39] -rw------- 1 boinc boinc        95 Nov 23 04:39 pilot_heartbeat.json
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc      8192 Nov 23 04:39 boinc_mmap_file
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc        29 Nov 23 04:39 wrapper_checkpoint.txt
[2025-11-23 04:39:39] -rw------- 1 boinc boinc      4821 Nov 23 04:39 pilotlog.txt
[2025-11-23 04:39:39] -rw------- 1 boinc boinc   1845099 Nov 23 04:39 log.47523449._007494.job.log.1
[2025-11-23 04:39:39] -rw------- 1 boinc boinc       353 Nov 23 04:39 output.list
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc       620 Nov 23 04:39 runtime_log
[2025-11-23 04:39:39] -rw------- 1 boinc boinc   3891200 Nov 23 04:39 result.tar.gz
[2025-11-23 04:39:39] -rw------- 1 boinc boinc       679 Nov 23 04:39 X09NDmn5Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqKIKDmkT3Oqm.diag
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc      8905 Nov 23 04:39 runtime_log.err
[2025-11-23 04:39:39] -rw-r--r-- 1 boinc boinc     21644 Nov 23 04:39 stderr.txt
[2025-11-23 04:39:39] HITS file was successfully produced:
[2025-11-23 04:39:39] -rw------- 1 boinc boinc 917049650 Nov 23 04:38 shared/HITS.pool.root.1
[2025-11-23 04:39:39]  *** Contents of shared directory: ***
[2025-11-23 04:39:39] total 1301080
[2025-11-23 04:39:39] -rw-r--r-- 2 boinc boinc 410748808 Nov 23 00:59 ATLAS.root_0
[2025-11-23 04:39:39] -rw-r--r-- 2 boinc boinc    590096 Nov 23 00:59 input.tar.gz
[2025-11-23 04:39:39] -rw-r--r-- 2 boinc boinc     15847 Nov 23 00:59 start_atlas.sh
[2025-11-23 04:39:39] -rw------- 1 boinc boinc 917049650 Nov 23 04:38 HITS.pool.root.1
[2025-11-23 04:39:39] -rw------- 1 boinc boinc   3891200 Nov 23 04:39 result.tar.gz
04:39:41 (3105382): run_atlas exited; CPU time 151874.828691
04:39:41 (3105382): called boinc_finish(0)

</stderr_txt>
]]>

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