Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:41 (1691439): wrapper (7.7.26015): starting
21:49:41 (1691439): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 21:49:41] Arguments: --nthreads 8
[2025-11-22 21:49:41] Threads: 8
[2025-11-22 21:49:41] Checking for CVMFS
[2025-11-22 21:49:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 21:49:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 21:49:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 21:49:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 21:49:42] 2.11.3.0 1967046 23665 185708 153198 2 188 34717106 45568001 15450 130560 0 159543955 99.801 100273681 25548 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-22 21:49:42] CVMFS is ok
[2025-11-22 21:49:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 21:49:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 21:49:42] Further information can be found at the LHC@home message board.
[2025-11-22 21:49:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 21:49:42] Checking for apptainer binary...
[2025-11-22 21:49:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 21:49:42] Running /usr/bin/apptainer --version
[2025-11-22 21:49:42] apptainer version 1.4.1-1.el9
[2025-11-22 21:49:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 21:49:42] wns0023.triumf.lcg
[2025-11-22 21:49:42] apptainer works
[2025-11-22 21:49:42] Set ATHENA_PROC_NUMBER=8
[2025-11-22 21:49:42] Set ATHENA_CORE_NUMBER=8
[2025-11-22 21:49:42] Starting ATLAS job with PandaID=6895348817
[2025-11-22 21:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:57:27]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 21:57:27] 2025-11-23 05:56:55,138 | WARNING  | wrong length of table data, x=[1763877082.0, 1763877143.0, 1763877204.0, 1763877265.0], y=[993.0, 597283.0, 455621.0, 705103.0] (must be same and length>=4)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,138 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | ..............................
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . Timing measurements:
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . get job = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . initial setup = 4 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . payload setup = 18 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . stage-in = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . payload execution = 219 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . stage-out = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . log creation = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | ..............................
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 21:57:27] 2025-11-23 05:56:55,140 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895348817/pilotlog.txt
[2025-11-22 21:57:27] 2025-11-23 05:56:55,161 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 21:57:27] - Log from pilotlog.txt -
[2025-11-22 21:57:27] 2025-11-23 05:56:55,131 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895348817/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | INFO     | extracted standard info from prmon json
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 21:57:27] 2025-11-23 05:56:55,138 | WARNING  | wrong length of table data, x=[1763877082.0, 1763877143.0, 1763877204.0, 1763877265.0], y=[993.0, 597283.0, 455621.0, 705103.0] (must be same and length>=4)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,138 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | ..............................
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . Timing measurements:
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . get job = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . initial setup = 4 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . payload setup = 18 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . stage-in = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . payload execution = 219 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . stage-out = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . log creation = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | ..............................
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 21:57:27] 2025-11-23 05:56:55,140 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895348817/pilotlog.txt
[2025-11-22 21:57:27] 2025-11-23 05:56:55,161 | WARNING  | 
[2025-11-22 21:57:27] [begin log extracts]
[2025-11-22 21:57:27] - Log from pilotlog.txt -
[2025-11-22 21:57:27] 2025-11-23 05:56:55,131 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895348817/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | INFO     | extracted standard info from prmon json
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 21:57:27] 2025-11-23 05:56:55,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 21:57:27] 2025-11-23 05:56:55,138 | WARNING  | wrong length of table data, x=[1763877082.0, 1763877143.0, 1763877204.0, 1763877265.0], y=[993.0, 597283.0, 455621.0, 705103.0] (must be same and length>=4)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,138 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | ..............................
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . Timing measurements:
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . get job = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . initial setup = 4 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . payload setup = 18 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . stage-in = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . payload execution = 219 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . stage-out = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | . log creation = 0 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | ..............................
[2025-11-22 21:57:27] 2025-11-23 05:56:55,139 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 21:57:27] 2025-11-23 05:56:55,140 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895348817/pilotlog.txt
[2025-11-22 21:57:27] [end log extracts]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,162 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,162 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 21:57:27] 2025-11-23 05:56:55,243 | INFO     | 
[2025-11-22 21:57:27] 2025-11-23 05:56:55,243 | INFO     | job summary report
[2025-11-22 21:57:27] 2025-11-23 05:56:55,243 | INFO     | --------------------------------------------------
[2025-11-22 21:57:27] 2025-11-23 05:56:55,243 | INFO     | PanDA job id: 6895348817
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | task id: 47556149
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 21:54:40,711 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | pilot state: failed 
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | transexitcode: 65
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | exeerrorcode: 65
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | exitcode: 65
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | cpuconsumptiontime: 52 s
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | nevents: 0
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | neventsw: 0
[2025-11-22 21:57:27] 2025-11-23 05:56:55,244 | INFO     | pid: 1708905
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | pgrp: 1708905
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | corecount: 8
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | event service: False
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | sizes: {0: 2297875, 1: 2298557, 2: 2298756, 12: 2298756, 17: 2299046, 23: 2299074, 240: 2324705, 241: 2329023, 367: 2329161}
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | --------------------------------------------------
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | 
[2025-11-22 21:57:27] 2025-11-23 05:56:55,245 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 21:57:27] 2025-11-23 05:56:55,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:57:27] 2025-11-23 05:56:55,268 | INFO     | job 6895348817 has completed (purged errors)
[2025-11-22 21:57:27] 2025-11-23 05:56:55,268 | INFO     | overall cleanup function is called
[2025-11-22 21:57:27] 2025-11-23 05:56:56,276 | INFO     | --- collectZombieJob: --- 10, [1708905]
[2025-11-22 21:57:27] 2025-11-23 05:56:56,276 | INFO     | zombie collector waiting for pid 1708905
[2025-11-22 21:57:27] 2025-11-23 05:56:56,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:57:27] 2025-11-23 05:56:56,276 | INFO     | collected zombie processes
[2025-11-22 21:57:27] 2025-11-23 05:56:56,277 | INFO     | will attempt to kill all subprocesses of pid=1708905
[2025-11-22 21:57:27] 2025-11-23 05:56:56,945 | INFO     | process IDs to be killed: [1708905] (in reverse order)
[2025-11-22 21:57:27] 2025-11-23 05:56:57,011 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:57:27] 2025-11-23 05:56:57,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:57:27] 2025-11-23 05:56:57,060 | INFO     | did not find any defunct processes belonging to 1708905
[2025-11-22 21:57:27] 2025-11-23 05:56:57,079 | INFO     | did not find any defunct processes belonging to 1708905
[2025-11-22 21:57:27] 2025-11-23 05:56:57,080 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:57:27] 2025-11-23 05:56:57,080 | INFO     | ready for new job
[2025-11-22 21:57:27] 2025-11-23 05:56:57,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:57:27] 2025-11-23 05:56:57,098 | INFO     | ***************************************
[2025-11-22 21:57:27] 2025-11-23 05:56:57,098 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:57:27] 2025-11-23 05:56:57,098 | INFO     | ***************************************
[2025-11-22 21:57:27] 2025-11-23 05:56:57,098 | INFO     | 
[2025-11-22 21:57:27] 2025-11-23 05:56:57,099 | INFO     | architecture information:
[2025-11-22 21:57:27] 2025-11-23 05:56:57,111 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:57:27] 2025-11-23 05:56:57,212 | INFO     | cat /etc/os-release:
[2025-11-22 21:57:27] NAME="CentOS Linux"
[2025-11-22 21:57:27] VERSION="7 (Core)"
[2025-11-22 21:57:27] ID="centos"
[2025-11-22 21:57:27] ID_LIKE="rhel fedora"
[2025-11-22 21:57:27] VERSION_ID="7"
[2025-11-22 21:57:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:57:27] ANSI_COLOR="0;31"
[2025-11-22 21:57:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:57:27] HOME_URL="https://www.centos.org/"
[2025-11-22 21:57:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:57:27] 
[2025-11-22 21:57:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:57:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:57:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:57:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:57:27] 
[2025-11-22 21:57:27] 2025-11-23 05:56:57,213 | INFO     | ***************************************
[2025-11-22 21:57:27] 2025-11-23 05:56:57,716 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 21:57:27] 2025-11-23 05:56:57,730 | INFO     | sufficient remaining disk space (824201707520 B)
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | INFO     | update_server=False
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | INFO     | aborting loop
[2025-11-22 21:57:27] 2025-11-23 05:56:57,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:57:27] 2025-11-23 05:56:57,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:57:27] 2025-11-23 05:56:58,382 | INFO     | all payload control threads have been joined
[2025-11-22 21:57:27] 2025-11-23 05:56:58,587 | INFO     | all data control threads have been joined
[2025-11-22 21:57:27] 2025-11-23 05:56:58,683 | INFO     | all job control threads have been joined
[2025-11-22 21:57:27] 2025-11-23 05:56:58,737 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:58,742 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:58,928 | INFO     | [job] validate thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,063 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,147 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,388 | INFO     | [payload] control thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,471 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,593 | INFO     | [data] control thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,613 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,678 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,693 | INFO     | [job] control thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,739 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:56:59,813 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:57:00,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:57:27] 2025-11-23 05:57:01,262 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:57:01,745 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:57:27] 2025-11-23 05:57:16,102 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:57:27] 2025-11-23 05:57:17,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482203232064)>', '<ExcThread(monitor, started 140481518360320)>']
[2025-11-22 21:57:27] 2025-11-23 05:57:22,186 | INFO     | all workflow threads have been joined
[2025-11-22 21:57:27] 2025-11-23 05:57:22,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:57:27] 2025-11-23 05:57:22,187 | INFO     | traces error code: 0
[2025-11-22 21:57:27] 2025-11-23 05:57:22,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:57:27] 2025-11-23 05:57:27,323 | INFO     | PID=1699015 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 21:57:27] 2025-11-23 05:57:27,323 | INFO     | .. there are 26 such processes running
[2025-11-22 21:57:27] 2025-11-23 05:57:27,324 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:57:27] 2025-11-23 05:57:27,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:57:27] 2025-11-23 05:57:27,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:57:27] 2025-11-23 05:57:27,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:57:27] 2025-11-23 05:57:27,324 | INFO     | [monitor] control thread has ended
[2025-11-22 21:57:27] 2025-11-23 05:57:27,447 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:57:27] 2025-11-23 05:57:27,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:57:27] 2025-11-23 05:57:27,451 [wrapper] pilotpid: 1699015
[2025-11-22 21:57:27] 2025-11-23 05:57:27,452 [wrapper] Pilot exit status: 0
[2025-11-22 21:57:27] 2025-11-23 05:57:27,459 [wrapper] pandaids: 6895348817
[2025-11-22 21:57:27] 2025-11-23 05:57:27,497 [wrapper] cleanup supervisor_pilot 1699031 1699016
[2025-11-22 21:57:27] 2025-11-23 05:57:27,499 [wrapper] Test setup, not cleaning
[2025-11-22 21:57:27] 2025-11-23 05:57:27,501 [wrapper] apfmon messages muted
[2025-11-22 21:57:27] 2025-11-23 05:57:27,503 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:57:27] 2025-11-23 05:57:27,504 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:57:27]  *** Error codes and diagnostics ***
[2025-11-22 21:57:27]     "exeErrorCode": 65,
[2025-11-22 21:57:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 21:57:27]     "pilotErrorCode": 1305,
[2025-11-22 21:57:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 21:57:27]  *** Listing of results directory ***
[2025-11-22 21:57:27] total 405996
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc    576529 Nov 22 11:25 pilot3.tar.gz
[2025-11-22 21:57:27] -rwx------. 1 boinc boinc     36292 Nov 22 11:54 runpilot2-wrapper.sh
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc      5112 Nov 22 11:54 queuedata.json
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc       100 Nov 22 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:57:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 21:49 run_atlas
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc       105 Nov 22 21:49 job.xml
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc      6444 Nov 22 21:49 init_data.xml
[2025-11-22 21:57:27] -rw-r--r--. 2 boinc boinc 411501534 Nov 22 21:49 EVNT.47483658._001111.pool.root.1
[2025-11-22 21:57:27] -rw-r--r--. 2 boinc boinc     15847 Nov 22 21:49 start_atlas.sh
[2025-11-22 21:57:27] drwxrwx--x. 2 boinc boinc      4096 Nov 22 21:49 shared
[2025-11-22 21:57:27] -rw-r--r--. 2 boinc boinc    590108 Nov 22 21:49 input.tar.gz
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc         0 Nov 22 21:49 boinc_lockfile
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc      2783 Nov 22 21:49 pandaJob.out
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc    989784 Nov 22 21:50 agis_schedconf.cvmfs.json
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc   1526164 Nov 22 21:50 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:57:27] drwx------. 5 boinc boinc      4096 Nov 22 21:50 pilot3
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc       524 Nov 22 21:54 boinc_task_state.xml
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc      1026 Nov 22 21:54 memory_monitor_summary.json
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc     51704 Nov 22 21:54 log.47556149._000980.job.log.tgz.1
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc     10353 Nov 22 21:56 heartbeat.json
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc      8192 Nov 22 21:57 boinc_mmap_file
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc        23 Nov 22 21:57 wrapper_checkpoint.txt
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc        95 Nov 22 21:57 pilot_heartbeat.json
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc       823 Nov 22 21:57 pilotlog.txt
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc    116772 Nov 22 21:57 log.47556149._000980.job.log.1
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc       186 Nov 22 21:57 output.list
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc       620 Nov 22 21:57 runtime_log
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc    194560 Nov 22 21:57 result.tar.gz
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc      8634 Nov 22 21:57 runtime_log.err
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc       648 Nov 22 21:57 KGPODmlr8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDGIKDmA5WYEm.diag
[2025-11-22 21:57:27] -rw-r--r--. 1 boinc boinc      2138 Nov 22 21:57 stderr.txt
[2025-11-22 21:57:27] No HITS result produced
[2025-11-22 21:57:27]  *** Contents of shared directory: ***
[2025-11-22 21:57:27] total 402652
[2025-11-22 21:57:27] -rw-r--r--. 2 boinc boinc 411501534 Nov 22 21:49 ATLAS.root_0
[2025-11-22 21:57:27] -rw-r--r--. 2 boinc boinc     15847 Nov 22 21:49 start_atlas.sh
[2025-11-22 21:57:27] -rw-r--r--. 2 boinc boinc    590108 Nov 22 21:49 input.tar.gz
[2025-11-22 21:57:27] -rw-------. 1 boinc boinc    194560 Nov 22 21:57 result.tar.gz
21:57:28 (1691439): run_atlas exited; CPU time 57.240653
21:57:28 (1691439): called boinc_finish(0)

</stderr_txt>
]]>

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