Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:29:50 (19866): wrapper (7.7.26015): starting
00:29:50 (19866): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:29:50] Arguments: --nthreads 8
[2025-11-23 00:29:50] Threads: 8
[2025-11-23 00:29:50] Checking for CVMFS
[2025-11-23 00:29:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:29:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:29:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:29:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:29:51] 2.11.2.0 26213 60868 84836 153198 2 82 12109503 20275201 1 130560 0 14708590 99.830 3517800 30100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:29:51] CVMFS is ok
[2025-11-23 00:29:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:29:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:29:51] Further information can be found at the LHC@home message board.
[2025-11-23 00:29:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:29:51] Checking for apptainer binary...
[2025-11-23 00:29:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:29:51] Running /usr/bin/apptainer --version
[2025-11-23 00:29:51] apptainer version 1.3.2-1.el7
[2025-11-23 00:29:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:29:53] c-115-4.aglt2.org
[2025-11-23 00:29:53] apptainer works
[2025-11-23 00:29:53] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:29:53] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:29:53] Starting ATLAS job with PandaID=6895348356
[2025-11-23 00:29:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:37:24]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:37:24] 2025-11-23 16:36:49,643 | INFO     | PID=24496 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 11:37:24] 2025-11-23 16:36:49,847 | INFO     | monitor loop #2921: job 0:6895348356 is in state 'finished'
[2025-11-23 11:37:24] 2025-11-23 16:36:49,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:37:24] 2025-11-23 16:36:50,644 | INFO     | time since job start (40000s) is within the limit (172800.0s)
[2025-11-23 11:37:24] 2025-11-23 16:36:51,976 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 11:37:24] 2025-11-23 16:36:51,979 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-23 11:37:24] 2025-11-23 16:36:51,981 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895348356/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 11:37:24] 2025-11-23 16:36:51,982 | INFO     | extracted standard info from prmon json
[2025-11-23 11:37:24] 2025-11-23 16:36:51,983 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 11:37:24] 2025-11-23 16:36:51,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 11:37:24] 2025-11-23 16:36:51,992 | INFO     | fitting pss+swap vs Time
[2025-11-23 11:37:24] 2025-11-23 16:36:51,993 | INFO     | sum of square deviations: 87136819354.32982
[2025-11-23 11:37:24] 2025-11-23 16:36:52,001 | INFO     | sum of deviations: 661626664046.7496
[2025-11-23 11:37:24] 2025-11-23 16:36:52,002 | INFO     | mean x: 1763895789.6534352
[2025-11-23 11:37:24] 2025-11-23 16:36:52,002 | INFO     | mean y: 3128480.355725191
[2025-11-23 11:37:24] 2025-11-23 16:36:52,002 | INFO     | intersect: -13390067365.924835
[2025-11-23 11:37:24] 2025-11-23 16:36:52,003 | INFO     | chi2: 5.644692645820871
[2025-11-23 11:37:24] 2025-11-23 16:36:52,003 | INFO     | sum of square deviations: 85156642994.678
[2025-11-23 11:37:24] 2025-11-23 16:36:52,012 | INFO     | sum of deviations: 894486025477.4598
[2025-11-23 11:37:24] 2025-11-23 16:36:52,012 | INFO     | mean x: 1763895637.1584616
[2025-11-23 11:37:24] 2025-11-23 16:36:52,012 | INFO     | mean y: 3146408.18
[2025-11-23 11:37:24] 2025-11-23 16:36:52,012 | INFO     | intersect: -18524826775.75011
[2025-11-23 11:37:24] 2025-11-23 16:36:52,013 | INFO     | chi2: 2.5787041073948673
[2025-11-23 11:37:24] 2025-11-23 16:36:52,013 | INFO     | current chi2=2.5787041073948673 (change=54.31630614460386 %)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,014 | INFO     | sum of square deviations: 83206581176.96117
[2025-11-23 11:37:24] 2025-11-23 16:36:52,021 | INFO     | sum of deviations: 902904060554.4186
[2025-11-23 11:37:24] 2025-11-23 16:36:52,022 | INFO     | mean x: 1763895484.6589148
[2025-11-23 11:37:24] 2025-11-23 16:36:52,022 | INFO     | mean y: 3147057.4837209303
[2025-11-23 11:37:24] 2025-11-23 16:36:52,022 | INFO     | intersect: -19137507118.716423
[2025-11-23 11:37:24] 2025-11-23 16:36:52,023 | INFO     | chi2: 2.4970179353833366
[2025-11-23 11:37:24] 2025-11-23 16:36:52,023 | INFO     | current chi2=2.4970179353833366 (change=3.1677217939538664 %)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,023 | INFO     | right removable region: 644
[2025-11-23 11:37:24] 2025-11-23 16:36:52,023 | INFO     | sum of square deviations: 85156381914.67804
[2025-11-23 11:37:24] 2025-11-23 16:36:52,031 | INFO     | sum of deviations: 463735839915.43896
[2025-11-23 11:37:24] 2025-11-23 16:36:52,032 | INFO     | mean x: 1763895942.1584616
[2025-11-23 11:37:24] 2025-11-23 16:36:52,032 | INFO     | mean y: 3143689.2384615387
[2025-11-23 11:37:24] 2025-11-23 16:36:52,032 | INFO     | intersect: -9602498869.411587
[2025-11-23 11:37:24] 2025-11-23 16:36:52,032 | INFO     | chi2: 3.2839181844889924
[2025-11-23 11:37:24] 2025-11-23 16:36:52,033 | INFO     | current chi2=3.2839181844889924 (change=41.822905328241596 %)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,033 | INFO     | sum of square deviations: 83206256900.64197
[2025-11-23 11:37:24] 2025-11-23 16:36:52,041 | INFO     | sum of deviations: 425711477834.51245
[2025-11-23 11:37:24] 2025-11-23 16:36:52,041 | INFO     | mean x: 1763896094.660465
[2025-11-23 11:37:24] 2025-11-23 16:36:52,041 | INFO     | mean y: 3146660.6279069767
[2025-11-23 11:37:24] 2025-11-23 16:36:52,042 | INFO     | intersect: -9021545005.301823
[2025-11-23 11:37:24] 2025-11-23 16:36:52,042 | INFO     | chi2: 3.247815179487554
[2025-11-23 11:37:24] 2025-11-23 16:36:52,042 | INFO     | current chi2=3.247815179487554 (change=1.0993880776922142 %)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,042 | INFO     | left removable region: 20
[2025-11-23 11:37:24] 2025-11-23 16:36:52,043 | INFO     | sum of square deviations: 75341064576.65192
[2025-11-23 11:37:24] 2025-11-23 16:36:52,050 | INFO     | sum of deviations: 620037249603.0287
[2025-11-23 11:37:24] 2025-11-23 16:36:52,051 | INFO     | mean x: 1763896064.161859
[2025-11-23 11:37:24] 2025-11-23 16:36:52,051 | INFO     | mean y: 3169355.0096153845
[2025-11-23 11:37:24] 2025-11-23 16:36:52,051 | INFO     | intersect: -14513233756.016464
[2025-11-23 11:37:24] 2025-11-23 16:36:52,051 | INFO     | chi2: 0.06021992571033568
[2025-11-23 11:37:24] 2025-11-23 16:36:52,052 | INFO     | current memory leak: 8.23 B/s (using 624 data points, chi2=0.06)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,052 | INFO     | could have reported an average CPU frequency of 2406 MHz (25 samples)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | ..............................
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . Timing measurements:
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . get job = 0 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . initial setup = 2 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . payload setup = 9 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . stage-in = 0 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . payload execution = 39958 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . stage-out = 3 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,053 | INFO     | . log creation = 0 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,054 | INFO     | ..............................
[2025-11-23 11:37:24] 2025-11-23 16:36:52,504 | INFO     | 
[2025-11-23 11:37:24] 2025-11-23 16:36:52,505 | INFO     | job summary report
[2025-11-23 11:37:24] 2025-11-23 16:36:52,505 | INFO     | --------------------------------------------------
[2025-11-23 11:37:24] 2025-11-23 16:36:52,505 | INFO     | PanDA job id: 6895348356
[2025-11-23 11:37:24] 2025-11-23 16:36:52,505 | INFO     | task id: 47556149
[2025-11-23 11:37:24] 2025-11-23 16:36:52,505 | INFO     | errors: (none)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,506 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 11:37:24] 2025-11-23 16:36:52,506 | INFO     | pilot state: finished 
[2025-11-23 11:37:24] 2025-11-23 16:36:52,506 | INFO     | transexitcode: 0
[2025-11-23 11:37:24] 2025-11-23 16:36:52,506 | INFO     | exeerrorcode: 0
[2025-11-23 11:37:24] 2025-11-23 16:36:52,506 | INFO     | exeerrordiag: 
[2025-11-23 11:37:24] 2025-11-23 16:36:52,507 | INFO     | exitcode: 0
[2025-11-23 11:37:24] 2025-11-23 16:36:52,507 | INFO     | exitmsg: OK
[2025-11-23 11:37:24] 2025-11-23 16:36:52,507 | INFO     | cpuconsumptiontime: 312276 s
[2025-11-23 11:37:24] 2025-11-23 16:36:52,507 | INFO     | nevents: 1000
[2025-11-23 11:37:24] 2025-11-23 16:36:52,507 | INFO     | neventsw: 0
[2025-11-23 11:37:24] 2025-11-23 16:36:52,507 | INFO     | pid: 30878
[2025-11-23 11:37:24] 2025-11-23 16:36:52,508 | INFO     | pgrp: 30878
[2025-11-23 11:37:24] 2025-11-23 16:36:52,508 | INFO     | corecount: 8
[2025-11-23 11:37:24] 2025-11-23 16:36:52,508 | INFO     | event service: False
[2025-11-23 11:37:24] 2025-11-23 16:36:52,508 | INFO     | sizes: {0: 2298753, 6: 2299015, 11: 2299043, 39971: 2342519, 39975: 2351513, 39977: 2351569, 39984: 2352007}
[2025-11-23 11:37:24] 2025-11-23 16:36:52,508 | INFO     | --------------------------------------------------
[2025-11-23 11:37:24] 2025-11-23 16:36:52,508 | INFO     | 
[2025-11-23 11:37:24] 2025-11-23 16:36:52,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 11:37:24] 2025-11-23 16:36:52,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 11:37:24] 2025-11-23 16:36:52,543 | INFO     | job 6895348356 has completed (purged errors)
[2025-11-23 11:37:24] 2025-11-23 16:36:52,544 | INFO     | overall cleanup function is called
[2025-11-23 11:37:24] 2025-11-23 16:36:53,559 | INFO     | --- collectZombieJob: --- 10, [30878]
[2025-11-23 11:37:24] 2025-11-23 16:36:53,559 | INFO     | zombie collector waiting for pid 30878
[2025-11-23 11:37:24] 2025-11-23 16:36:53,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 11:37:24] 2025-11-23 16:36:53,559 | INFO     | collected zombie processes
[2025-11-23 11:37:24] 2025-11-23 16:36:53,560 | INFO     | will attempt to kill all subprocesses of pid=30878
[2025-11-23 11:37:24] 2025-11-23 16:36:53,646 | INFO     | process IDs to be killed: [30878] (in reverse order)
[2025-11-23 11:37:24] 2025-11-23 16:36:53,703 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 11:37:24] 2025-11-23 16:36:53,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 11:37:24] 2025-11-23 16:36:53,708 | INFO     | did not find any defunct processes belonging to 30878
[2025-11-23 11:37:24] 2025-11-23 16:36:53,712 | INFO     | did not find any defunct processes belonging to 30878
[2025-11-23 11:37:24] 2025-11-23 16:36:53,715 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 11:37:24] 2025-11-23 16:36:53,715 | INFO     | ready for new job
[2025-11-23 11:37:24] 2025-11-23 16:36:53,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 11:37:24] 2025-11-23 16:36:53,718 | INFO     | ***************************************
[2025-11-23 11:37:24] 2025-11-23 16:36:53,718 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 11:37:24] 2025-11-23 16:36:53,718 | INFO     | ***************************************
[2025-11-23 11:37:24] 2025-11-23 16:36:53,719 | INFO     | 
[2025-11-23 11:37:24] 2025-11-23 16:36:53,719 | INFO     | architecture information:
[2025-11-23 11:37:24] 2025-11-23 16:36:53,720 | INFO     | executing command: cat /etc/os-release
[2025-11-23 11:37:24] 2025-11-23 16:36:53,739 | INFO     | cat /etc/os-release:
[2025-11-23 11:37:24] NAME="CentOS Linux"
[2025-11-23 11:37:24] VERSION="7 (Core)"
[2025-11-23 11:37:24] ID="centos"
[2025-11-23 11:37:24] ID_LIKE="rhel fedora"
[2025-11-23 11:37:24] VERSION_ID="7"
[2025-11-23 11:37:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 11:37:24] ANSI_COLOR="0;31"
[2025-11-23 11:37:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 11:37:24] HOME_URL="https://www.centos.org/"
[2025-11-23 11:37:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 11:37:24] 
[2025-11-23 11:37:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 11:37:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 11:37:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:37:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:37:24] 
[2025-11-23 11:37:24] 2025-11-23 16:36:53,740 | INFO     | ***************************************
[2025-11-23 11:37:24] 2025-11-23 16:36:54,243 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 11:37:24] 2025-11-23 16:36:54,264 | INFO     | sufficient remaining disk space (17471373312 B)
[2025-11-23 11:37:24] 2025-11-23 16:36:54,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:37:24] 2025-11-23 16:36:54,264 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:37:24] 2025-11-23 16:36:54,265 | INFO     | update_server=False
[2025-11-23 11:37:24] 2025-11-23 16:36:54,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:37:24] 2025-11-23 16:36:54,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:37:24] 2025-11-23 16:36:54,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:37:24] 2025-11-23 16:36:54,266 | INFO     | aborting loop
[2025-11-23 11:37:24] 2025-11-23 16:36:54,409 | INFO     | all data control threads have been joined
[2025-11-23 11:37:24] 2025-11-23 16:36:55,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:37:24] 2025-11-23 16:36:55,030 | INFO     | all job control threads have been joined
[2025-11-23 11:37:24] 2025-11-23 16:36:55,268 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:55,271 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:55,344 | INFO     | all payload control threads have been joined
[2025-11-23 11:37:24] 2025-11-23 16:36:55,414 | INFO     | [data] control thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:55,778 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:55,978 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:55,983 | INFO     | [job] validate thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,009 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,035 | INFO     | [job] control thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,098 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,145 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,145 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,272 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,349 | INFO     | [payload] control thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:56,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:57,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:37:24] 2025-11-23 16:36:58,151 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:36:59,033 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:37:24] 2025-11-23 16:37:16,412 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:37:24] 2025-11-23 16:37:17,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692815951680)>', '<ExcThread(monitor, started 139691932251904)>']
[2025-11-23 11:37:24] 2025-11-23 16:37:22,946 | INFO     | all workflow threads have been joined
[2025-11-23 11:37:24] 2025-11-23 16:37:22,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:37:24] 2025-11-23 16:37:22,947 | INFO     | traces error code: 0
[2025-11-23 11:37:24] 2025-11-23 16:37:22,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:37:24] 2025-11-23 16:37:23,767 | INFO     | PID=24496 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 11:37:24] 2025-11-23 16:37:23,768 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:37:24] 2025-11-23 16:37:23,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:37:24] 2025-11-23 16:37:23,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:37:24] 2025-11-23 16:37:23,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:37:24] 2025-11-23 16:37:23,768 | INFO     | [monitor] control thread has ended
[2025-11-23 11:37:24] 2025-11-23 16:37:23,880 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:37:24] 2025-11-23 16:37:23,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:37:24] 2025-11-23 16:37:23,890 [wrapper] pilotpid: 24496
[2025-11-23 11:37:24] 2025-11-23 16:37:23,895 [wrapper] Pilot exit status: 0
[2025-11-23 11:37:24] 2025-11-23 16:37:23,913 [wrapper] pandaids: 6895348356
[2025-11-23 11:37:24] 2025-11-23 16:37:23,961 [wrapper] cleanup supervisor_pilot 11786 24497
[2025-11-23 11:37:24] 2025-11-23 16:37:23,966 [wrapper] Test setup, not cleaning
[2025-11-23 11:37:24] 2025-11-23 16:37:23,971 [wrapper] apfmon messages muted
[2025-11-23 11:37:24] 2025-11-23 16:37:23,976 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:37:24] 2025-11-23 16:37:23,981 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:37:24]  *** Error codes and diagnostics ***
[2025-11-23 11:37:24]     "exeErrorCode": 0,
[2025-11-23 11:37:24]     "exeErrorDiag": "",
[2025-11-23 11:37:24]     "pilotErrorCode": 0,
[2025-11-23 11:37:24]     "pilotErrorDiag": "",
[2025-11-23 11:37:24]  *** Listing of results directory ***
[2025-11-23 11:37:24] total 1319112
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:41 queuedata.json
[2025-11-23 11:37:24] -rwx------ 1 boincer umatlas     36292 Nov 22 14:43 runpilot2-wrapper.sh
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas       100 Nov 23 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:37:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 00:29 run_atlas
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas       105 Nov 23 00:29 job.xml
[2025-11-23 11:37:24] -rw-r--r-- 2 boincer umatlas 412514343 Nov 23 00:29 EVNT.47483658._001109.pool.root.1
[2025-11-23 11:37:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 00:29 start_atlas.sh
[2025-11-23 11:37:24] drwxrwx--x 2 boincer umatlas      4096 Nov 23 00:29 shared
[2025-11-23 11:37:24] -rw-r--r-- 2 boincer umatlas    590106 Nov 23 00:29 input.tar.gz
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas         0 Nov 23 00:29 boinc_lockfile
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas      2783 Nov 23 00:29 pandaJob.out
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas        57 Nov 23 00:29 setup.sh.local
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas    989784 Nov 23 00:30 agis_schedconf.cvmfs.json
[2025-11-23 11:37:24] drwx------ 5 boincer umatlas      4096 Nov 23 00:30 pilot3
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas       533 Nov 23 11:28 boinc_task_state.xml
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas      5911 Nov 23 11:30 init_data.xml
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas 919546012 Nov 23 11:36 HITS.47556149._000957.pool.root.1
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas      1064 Nov 23 11:36 memory_monitor_summary.json
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas   1526164 Nov 23 11:36 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas   1905814 Nov 23 11:36 log.47556149._000957.job.log.tgz.1
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas        95 Nov 23 11:36 pilot_heartbeat.json
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas      8655 Nov 23 11:36 heartbeat.json
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 11:36 boinc_mmap_file
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas        29 Nov 23 11:37 wrapper_checkpoint.txt
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas       745 Nov 23 11:37 pilotlog.txt
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas   5492494 Nov 23 11:37 log.47556149._000957.job.log.1
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas       353 Nov 23 11:37 output.list
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas       620 Nov 23 11:37 runtime_log
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas   7413760 Nov 23 11:37 result.tar.gz
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 11:37 runtime_log.err
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas       666 Nov 23 11:37 RkfKDmYh8g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6LKKDmONVbom.diag
[2025-11-23 11:37:24] -rw-r--r-- 1 boincer umatlas     21397 Nov 23 11:37 stderr.txt
[2025-11-23 11:37:24] HITS file was successfully produced:
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas 919546012 Nov 23 11:36 shared/HITS.pool.root.1
[2025-11-23 11:37:24]  *** Contents of shared directory: ***
[2025-11-23 11:37:24] total 1308684
[2025-11-23 11:37:24] -rw-r--r-- 2 boincer umatlas 412514343 Nov 23 00:29 ATLAS.root_0
[2025-11-23 11:37:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 00:29 start_atlas.sh
[2025-11-23 11:37:24] -rw-r--r-- 2 boincer umatlas    590106 Nov 23 00:29 input.tar.gz
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas 919546012 Nov 23 11:36 HITS.pool.root.1
[2025-11-23 11:37:24] -rw------- 1 boincer umatlas   7413760 Nov 23 11:37 result.tar.gz
11:37:25 (19866): run_atlas exited; CPU time 310602.451926
11:37:25 (19866): called boinc_finish(0)

</stderr_txt>
]]>

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