Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:55:54 (3758768): wrapper (7.7.26015): starting
00:55:54 (3758768): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:55:54] Arguments: --nthreads 8
[2025-11-23 00:55:54] Threads: 8
[2025-11-23 00:55:54] Checking for CVMFS
[2025-11-23 00:55:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:55:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:55:57] 2.13.3.0 9702 25340 324864 153198 1 377 29901204 32935936 29781 16776704 0 134120977 99.699 95769323 32983 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:55:57] CVMFS is ok
[2025-11-23 00:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:55:57] Further information can be found at the LHC@home message board.
[2025-11-23 00:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:55:57] Checking for apptainer binary...
[2025-11-23 00:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:55:57] Running /usr/bin/apptainer --version
[2025-11-23 00:55:58] apptainer version 1.4.4-1.el9
[2025-11-23 00:55:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:55:59] c-4-37.aglt2.org
[2025-11-23 00:55:59] apptainer works
[2025-11-23 00:55:59] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:55:59] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:55:59] Starting ATLAS job with PandaID=6895330478
[2025-11-23 00:55:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:36:24]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:36:24] 2025-11-24 07:24:05,635 | INFO     | monitor loop #5288: job 0:6895330478 is in state 'finished'
[2025-11-24 02:36:24] 2025-11-24 07:24:05,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:36:24] 2025-11-24 07:24:06,681 | INFO     | time since job start (91626s) is within the limit (172800.0s)
[2025-11-24 02:36:24] 2025-11-24 07:24:08,210 | INFO     | monitor loop #5289: job 0:6895330478 is in state 'finished'
[2025-11-24 02:36:24] 2025-11-24 07:24:08,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:36:24] 2025-11-24 07:24:08,688 | INFO     | time since job start (91628s) is within the limit (172800.0s)
[2025-11-24 02:36:24] 2025-11-24 07:24:10,739 | INFO     | time since job start (91630s) is within the limit (172800.0s)
[2025-11-24 02:36:24] 2025-11-24 07:24:10,770 | INFO     | monitor loop #5290: job 0:6895330478 is in state 'finished'
[2025-11-24 02:36:24] 2025-11-24 07:24:10,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:36:24] 2025-11-24 07:24:12,746 | INFO     | time since job start (91632s) is within the limit (172800.0s)
[2025-11-24 02:36:24] 2025-11-24 07:24:13,275 | INFO     | monitor loop #5291: job 0:6895330478 is in state 'finished'
[2025-11-24 02:36:24] 2025-11-24 07:24:13,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:36:24] 2025-11-24 07:24:14,628 | INFO     | PID=3763259 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 02:36:24] 2025-11-24 07:24:14,629 | INFO     | .. there are 41 such processes running
[2025-11-24 02:36:24] 2025-11-24 07:24:15,631 | INFO     | time since job start (91635s) is within the limit (172800.0s)
[2025-11-24 02:36:24] 2025-11-24 07:24:15,697 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 02:36:24] 2025-11-24 07:24:15,717 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.843975
[2025-11-24 02:36:24] 2025-11-24 07:24:15,734 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895330478/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:36:24] 2025-11-24 07:24:15,734 | INFO     | extracted standard info from prmon json
[2025-11-24 02:36:24] 2025-11-24 07:24:15,734 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:36:24] 2025-11-24 07:24:15,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:36:24] 2025-11-24 07:24:15,809 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:36:24] 2025-11-24 07:24:15,820 | INFO     | sum of square deviations: 1046422437970.184
[2025-11-24 02:36:24] 2025-11-24 07:24:15,818 | INFO     | monitor loop #5292: job 0:6895330478 is in state 'finished'
[2025-11-24 02:36:24] 2025-11-24 07:24:15,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:36:24] 2025-11-24 07:24:15,994 | INFO     | sum of deviations: 3910913415432.4526
[2025-11-24 02:36:24] 2025-11-24 07:24:15,994 | INFO     | mean x: 1763923261.4766667
[2025-11-24 02:36:24] 2025-11-24 07:24:15,995 | INFO     | mean y: 2909166.6133333333
[2025-11-24 02:36:24] 2025-11-24 07:24:15,995 | INFO     | intersect: -6589601560.205604
[2025-11-24 02:36:24] 2025-11-24 07:24:15,996 | INFO     | chi2: 21.33610358509875
[2025-11-24 02:36:24] 2025-11-24 07:24:16,007 | INFO     | sum of square deviations: 1035994249335.932
[2025-11-24 02:36:24] 2025-11-24 07:24:16,183 | INFO     | sum of deviations: 4402602333504.63
[2025-11-24 02:36:24] 2025-11-24 07:24:16,184 | INFO     | mean x: 1763923108.993311
[2025-11-24 02:36:24] 2025-11-24 07:24:16,184 | INFO     | mean y: 2916355.0628762543
[2025-11-24 02:36:24] 2025-11-24 07:24:16,184 | INFO     | intersect: -7493121389.118204
[2025-11-24 02:36:24] 2025-11-24 07:24:16,186 | INFO     | chi2: 18.19950322016326
[2025-11-24 02:36:24] 2025-11-24 07:24:16,186 | INFO     | current chi2=18.19950322016326 (change=14.700905216480631 %)
[2025-11-24 02:36:24] 2025-11-24 07:24:16,186 | INFO     | right removable region: 1494
[2025-11-24 02:36:24] 2025-11-24 07:24:16,193 | INFO     | sum of square deviations: 1035989695685.9335
[2025-11-24 02:36:24] 2025-11-24 07:24:16,623 | INFO     | sum of deviations: 3334170582289.7856
[2025-11-24 02:36:24] 2025-11-24 07:24:16,624 | INFO     | mean x: 1763923413.993311
[2025-11-24 02:36:24] 2025-11-24 07:24:16,624 | INFO     | mean y: 2917596.1785953175
[2025-11-24 02:36:24] 2025-11-24 07:24:16,624 | INFO     | intersect: -5673993651.915122
[2025-11-24 02:36:24] 2025-11-24 07:24:16,626 | INFO     | chi2: 17.687093570038183
[2025-11-24 02:36:24] 2025-11-24 07:24:16,626 | INFO     | current chi2=17.687093570038183 (change=17.102513589262177 %)
[2025-11-24 02:36:24] 2025-11-24 07:24:16,626 | INFO     | left removable region: 10
[2025-11-24 02:36:24] 2025-11-24 07:24:16,678 | INFO     | sum of square deviations: 1013287838745.8104
[2025-11-24 02:36:24] 2025-11-24 07:24:16,833 | INFO     | sum of deviations: 3562968558957.977
[2025-11-24 02:36:24] 2025-11-24 07:24:16,833 | INFO     | mean x: 1763923383.528302
[2025-11-24 02:36:24] 2025-11-24 07:24:16,833 | INFO     | mean y: 2931478.7385444744
[2025-11-24 02:36:24] 2025-11-24 07:24:16,833 | INFO     | intersect: -6199455755.772315
[2025-11-24 02:36:24] 2025-11-24 07:24:16,836 | INFO     | chi2: 12.517155419287702
[2025-11-24 02:36:24] 2025-11-24 07:24:16,836 | INFO     | current memory leak: 3.52 B/s (using 1484 data points, chi2=12.52)
[2025-11-24 02:36:24] 2025-11-24 07:24:16,837 | INFO     | could have reported an average CPU frequency of 2599 MHz (53 samples)
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | ..............................
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . Timing measurements:
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . get job = 0 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . initial setup = 4 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . payload setup = 29 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . stage-in = 0 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . payload execution = 91490 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,838 | INFO     | . stage-out = 9 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,839 | INFO     | . log creation = 2 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,839 | INFO     | ..............................
[2025-11-24 02:36:24] 2025-11-24 07:24:16,989 | INFO     | 
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | job summary report
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | --------------------------------------------------
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | PanDA job id: 6895330478
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | task id: 47556137
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | errors: (none)
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | pilot state: finished 
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | transexitcode: 0
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | exeerrorcode: 0
[2025-11-24 02:36:24] 2025-11-24 07:24:16,990 | INFO     | exeerrordiag: 
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | exitcode: 0
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | exitmsg: OK
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | cpuconsumptiontime: 295941 s
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | nevents: 1000
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | neventsw: 0
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | pid: 3780748
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | pgrp: 3780748
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | corecount: 8
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | event service: False
[2025-11-24 02:36:24] 2025-11-24 07:24:16,991 | INFO     | sizes: {0: 2298693, 1: 2298835, 2: 2298835, 12: 2298863, 24: 2298891, 31: 2299181, 35: 2299337, 91520: 2365197, 91530: 2374191, 91534: 2374247, 91577: 2374589}
[2025-11-24 02:36:24] 2025-11-24 07:24:16,992 | INFO     | --------------------------------------------------
[2025-11-24 02:36:24] 2025-11-24 07:24:16,992 | INFO     | 
[2025-11-24 02:36:24] 2025-11-24 07:24:16,992 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 02:36:24] 2025-11-24 07:24:17,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:36:24] 2025-11-24 07:24:17,020 | INFO     | job 6895330478 has completed (purged errors)
[2025-11-24 02:36:24] 2025-11-24 07:24:17,021 | INFO     | overall cleanup function is called
[2025-11-24 02:36:24] 2025-11-24 07:24:18,054 | INFO     | --- collectZombieJob: --- 10, [3780748]
[2025-11-24 02:36:24] 2025-11-24 07:24:18,054 | INFO     | zombie collector waiting for pid 3780748
[2025-11-24 02:36:24] 2025-11-24 07:24:18,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:36:24] 2025-11-24 07:24:18,054 | INFO     | collected zombie processes
[2025-11-24 02:36:24] 2025-11-24 07:24:18,054 | INFO     | will attempt to kill all subprocesses of pid=3780748
[2025-11-24 02:36:24] 2025-11-24 07:24:18,815 | INFO     | process IDs to be killed: [3780748] (in reverse order)
[2025-11-24 02:36:24] 2025-11-24 07:24:19,100 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:36:24] 2025-11-24 07:24:19,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:36:24] 2025-11-24 07:24:19,147 | INFO     | did not find any defunct processes belonging to 3780748
[2025-11-24 02:36:24] 2025-11-24 07:24:19,178 | INFO     | did not find any defunct processes belonging to 3780748
[2025-11-24 02:36:24] 2025-11-24 07:24:19,184 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:36:24] 2025-11-24 07:24:19,184 | INFO     | ready for new job
[2025-11-24 02:36:24] 2025-11-24 07:24:19,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:36:24] 2025-11-24 07:24:19,198 | INFO     | ***************************************
[2025-11-24 02:36:24] 2025-11-24 07:24:19,198 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:36:24] 2025-11-24 07:24:19,198 | INFO     | ***************************************
[2025-11-24 02:36:24] 2025-11-24 07:24:19,199 | INFO     | 
[2025-11-24 02:36:24] 2025-11-24 07:24:19,209 | INFO     | architecture information:
[2025-11-24 02:36:24] 2025-11-24 07:24:19,217 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:36:24] 2025-11-24 07:24:19,255 | INFO     | cat /etc/os-release:
[2025-11-24 02:36:24] NAME="CentOS Linux"
[2025-11-24 02:36:24] VERSION="7 (Core)"
[2025-11-24 02:36:24] ID="centos"
[2025-11-24 02:36:24] ID_LIKE="rhel fedora"
[2025-11-24 02:36:24] VERSION_ID="7"
[2025-11-24 02:36:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:36:24] ANSI_COLOR="0;31"
[2025-11-24 02:36:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:36:24] HOME_URL="https://www.centos.org/"
[2025-11-24 02:36:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:36:24] 
[2025-11-24 02:36:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:36:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:36:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:36:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:36:24] 
[2025-11-24 02:36:24] 2025-11-24 07:24:19,255 | INFO     | ***************************************
[2025-11-24 02:36:24] 2025-11-24 07:24:19,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 02:36:24] 2025-11-24 07:24:19,840 | INFO     | sufficient remaining disk space (71041024000 B)
[2025-11-24 02:36:24] 2025-11-24 07:24:19,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:36:24] 2025-11-24 07:24:19,841 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:36:24] 2025-11-24 07:24:19,841 | INFO     | update_server=False
[2025-11-24 02:36:24] 2025-11-24 07:24:19,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:36:24] 2025-11-24 07:24:19,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:36:24] 2025-11-24 07:24:19,842 | INFO     | aborting loop
[2025-11-24 02:36:24] 2025-11-24 07:24:20,254 | INFO     | all data control threads have been joined
[2025-11-24 02:36:24] 2025-11-24 07:24:20,391 | INFO     | all payload control threads have been joined
[2025-11-24 02:36:24] 2025-11-24 07:24:20,847 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:20,851 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:20,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:36:24] 2025-11-24 07:24:21,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:36:24] 2025-11-24 07:24:21,161 | INFO     | [job] validate thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:21,163 | INFO     | all job control threads have been joined
[2025-11-24 02:36:24] 2025-11-24 07:24:21,260 | INFO     | [data] control thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:21,296 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:21,403 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:21,425 | INFO     | [payload] control thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:21,793 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:22,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:36:24] 2025-11-24 07:24:22,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:22,073 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:22,074 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:22,148 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:22,169 | INFO     | [job] control thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:23,013 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:23,078 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:24,897 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:36:24] 2025-11-24 07:24:49,456 | INFO     | PID=3763259 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 02:36:24] 2025-11-24 07:24:49,456 | INFO     | .. there are 41 such processes running
[2025-11-24 02:36:24] 2025-11-24 07:24:49,511 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:36:24] 2025-11-24 07:24:49,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:36:24] 2025-11-24 07:24:49,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:36:24] 2025-11-24 07:24:51,464 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:36:24] 2025-11-24 07:24:53,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629864523584)>', '<ExcThread(monitor, started 139629370005248)>']
[2025-11-24 02:36:24] 2025-11-24 07:24:53,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:36:24] 2025-11-24 07:24:53,556 | INFO     | [monitor] control thread has ended
[2025-11-24 02:36:24] 2025-11-24 07:24:58,064 | INFO     | all workflow threads have been joined
[2025-11-24 02:36:24] 2025-11-24 07:24:58,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:36:24] 2025-11-24 07:24:58,064 | INFO     | traces error code: 0
[2025-11-24 02:36:24] 2025-11-24 07:24:58,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:36:24] 2025-11-24 07:24:58,476 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:36:24] 2025-11-24 07:24:58,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:36:24] 2025-11-24 07:24:58,515 [wrapper] pilotpid: 3763259
[2025-11-24 02:36:24] 2025-11-24 07:24:58,538 [wrapper] Pilot exit status: 0
[2025-11-24 02:36:24] 2025-11-24 07:24:58,673 [wrapper] pandaids: 6895330478
[2025-11-24 02:36:24] 2025-11-24 07:24:58,875 [wrapper] cleanup supervisor_pilot  541349 3763260
[2025-11-24 02:36:24] 2025-11-24 07:24:58,936 [wrapper] Test setup, not cleaning
[2025-11-24 02:36:24] 2025-11-24 07:24:58,974 [wrapper] apfmon messages muted
[2025-11-24 02:36:24] 2025-11-24 07:24:58,993 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:36:24] 2025-11-24 07:24:59,011 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:36:24]  *** Error codes and diagnostics ***
[2025-11-24 02:36:24]     "exeErrorCode": 0,
[2025-11-24 02:36:24]     "exeErrorDiag": "",
[2025-11-24 02:36:24]     "pilotErrorCode": 0,
[2025-11-24 02:36:24]     "pilotErrorDiag": "",
[2025-11-24 02:36:24]  *** Listing of results directory ***
[2025-11-24 02:36:24] total 1325584
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 16:26 pilot3.tar.gz
[2025-11-24 02:36:24] -rwx------. 1 boincer umatlas     36292 Nov 21 16:30 runpilot2-wrapper.sh
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 16:30 queuedata.json
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:36:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:55 run_atlas
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:55 job.xml
[2025-11-24 02:36:24] -rw-r--r--. 2 boincer umatlas 410406972 Nov 23 00:55 EVNT.47483658._000140.pool.root.1
[2025-11-24 02:36:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:55 start_atlas.sh
[2025-11-24 02:36:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:55 shared
[2025-11-24 02:36:24] -rw-r--r--. 2 boincer umatlas    590096 Nov 23 00:55 input.tar.gz
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:55 boinc_lockfile
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 00:55 pandaJob.out
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas        57 Nov 23 00:56 setup.sh.local
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas    989784 Nov 23 00:56 agis_schedconf.cvmfs.json
[2025-11-24 02:36:24] drwx------. 5 boincer umatlas      4096 Nov 23 00:57 pilot3
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas       533 Nov 24 01:50 boinc_task_state.xml
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas 915605705 Nov 24 02:22 HITS.47556137._001398.pool.root.1
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas      1059 Nov 24 02:23 memory_monitor_summary.json
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas   1526164 Nov 24 02:23 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas   2481942 Nov 24 02:23 log.47556137._001398.job.log.tgz.1
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas        95 Nov 24 02:24 pilot_heartbeat.json
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas      8616 Nov 24 02:24 heartbeat.json
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas      4824 Nov 24 02:24 pilotlog.txt
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas  11247046 Nov 24 02:24 log.47556137._001398.job.log.1
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas       353 Nov 24 02:24 output.list
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas       620 Nov 24 02:24 runtime_log
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas  13752320 Nov 24 02:24 result.tar.gz
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas      9333 Nov 24 02:24 runtime_log.err
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas       659 Nov 24 02:24 esKNDmxsng8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmliJKDmEc3GDo.diag
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas      6661 Nov 24 02:36 init_data.xml
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 02:36 boinc_mmap_file
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas        29 Nov 24 02:36 wrapper_checkpoint.txt
[2025-11-24 02:36:24] -rw-r--r--. 1 boincer umatlas     21883 Nov 24 02:36 stderr.txt
[2025-11-24 02:36:24] HITS file was successfully produced:
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas 915605705 Nov 24 02:22 shared/HITS.pool.root.1
[2025-11-24 02:36:24]  *** Contents of shared directory: ***
[2025-11-24 02:36:24] total 1308972
[2025-11-24 02:36:24] -rw-r--r--. 2 boincer umatlas 410406972 Nov 23 00:55 ATLAS.root_0
[2025-11-24 02:36:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:55 start_atlas.sh
[2025-11-24 02:36:24] -rw-r--r--. 2 boincer umatlas    590096 Nov 23 00:55 input.tar.gz
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas 915605705 Nov 24 02:22 HITS.pool.root.1
[2025-11-24 02:36:24] -rw-------. 1 boincer umatlas  13752320 Nov 24 02:24 result.tar.gz
02:36:26 (3758768): run_atlas exited; CPU time 298532.908838
02:36:26 (3758768): called boinc_finish(0)

</stderr_txt>
]]>

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