Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:30:07 (454673): wrapper (7.7.26015): starting
01:30:07 (454673): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 01:30:07] Arguments: --nthreads 4
[2025-11-26 01:30:07] Threads: 4
[2025-11-26 01:30:07] Checking for CVMFS
[2025-11-26 01:30:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:30:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:30:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:30:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:30:08] 2.9.2.0 3127036 10619 92776 153303 0 81 34557919 36864001 0 130560 0 4238499 99.937 544971 6999 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 01:30:08] CVMFS is ok
[2025-11-26 01:30:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:30:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 01:30:08] Further information can be found at the LHC@home message board.
[2025-11-26 01:30:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:30:08] Checking for apptainer binary...
[2025-11-26 01:30:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:30:08] Running /usr/bin/apptainer --version
[2025-11-26 01:30:08] apptainer version 1.4.1-1.1
[2025-11-26 01:30:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:30:08] thA334
[2025-11-26 01:30:08] apptainer works
[2025-11-26 01:30:08] Set ATHENA_PROC_NUMBER=4
[2025-11-26 01:30:08] Set ATHENA_CORE_NUMBER=4
[2025-11-26 01:30:08] Starting ATLAS job with PandaID=6895348292
[2025-11-26 01:30:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:19:16]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:19:16] 2025-11-26 07:18:46,630 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:46,675 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:46,786 | INFO     | all payload control threads have been joined
[2025-11-26 08:19:16] 2025-11-26 07:18:46,938 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:46,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,083 | INFO     | [job] validate thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,153 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,286 | INFO     | [job] control thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,319 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,397 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,662 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:47,792 | INFO     | [payload] control thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:48,358 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:49,403 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:19:16] 2025-11-26 07:18:50,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435717478208)>', '<ExcThread(monitor, started 140434928023296)>']
[2025-11-26 08:19:16] 2025-11-26 07:18:55,682 | INFO     | all workflow threads have been joined
[2025-11-26 08:19:16] 2025-11-26 07:18:55,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:19:16] 2025-11-26 07:18:55,683 | INFO     | traces error code: 0
[2025-11-26 08:19:16] 2025-11-26 07:18:55,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | INFO     | PID=458478 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 08:19:16] 2025-11-26 07:19:15,850 | INFO     | [monitor] control thread has ended
[2025-11-26 08:19:16] 2025-11-26 07:19:15,915 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:19:16] 2025-11-26 07:19:15,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:19:16] 2025-11-26 07:19:15,922 [wrapper] pilotpid: 458478
[2025-11-26 08:19:16] 2025-11-26 07:19:15,926 [wrapper] Pilot exit status: 0
[2025-11-26 08:19:16] 2025-11-26 07:19:15,936 [wrapper] pandaids: 6895348292
[2025-11-26 08:19:16] 2025-11-26 07:19:15,957 [wrapper] cleanup supervisor_pilot  509886 458479
[2025-11-26 08:19:16] 2025-11-26 07:19:15,961 [wrapper] Test setup, not cleaning
[2025-11-26 08:19:16] 2025-11-26 07:19:15,964 [wrapper] apfmon messages muted
[2025-11-26 08:19:16] 2025-11-26 07:19:15,968 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:19:16] 2025-11-26 07:19:15,971 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:19:16]  *** Error codes and diagnostics ***
[2025-11-26 08:19:16]     "exeErrorCode": 0,
[2025-11-26 08:19:16]     "exeErrorDiag": "",
[2025-11-26 08:19:16]     "pilotErrorCode": 0,
[2025-11-26 08:19:16]     "pilotErrorDiag": "",
[2025-11-26 08:19:16]  *** Listing of results directory ***
[2025-11-26 08:19:16] total 1307828
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc    576529 Nov 22 20:25 pilot3.tar.gz
[2025-11-26 08:19:16] -rwx------ 1 boinc boinc     36292 Nov 22 20:36 runpilot2-wrapper.sh
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc      5112 Nov 22 20:36 queuedata.json
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:19:16] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:30 run_atlas
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:30 job.xml
[2025-11-26 08:19:16] -rw-r--r-- 2 boinc boinc 409020635 Nov 26 01:30 EVNT.47483658._000473.pool.root.1
[2025-11-26 08:19:16] -rw-r--r-- 2 boinc boinc    590106 Nov 26 01:30 input.tar.gz
[2025-11-26 08:19:16] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:30 start_atlas.sh
[2025-11-26 08:19:16] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:30 shared
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:30 boinc_setup_complete
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc      6369 Nov 26 01:30 init_data.xml
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:30 boinc_lockfile
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc      2785 Nov 26 01:30 pandaJob.out
[2025-11-26 08:19:16] -rw------- 1 boinc boinc    991877 Nov 26 01:30 agis_schedconf.cvmfs.json
[2025-11-26 08:19:16] drwx------ 5 boinc boinc      4096 Nov 26 01:30 pilot3
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc       531 Nov 26 08:14 boinc_task_state.xml
[2025-11-26 08:19:16] -rw------- 1 boinc boinc 916879736 Nov 26 08:18 HITS.47556137._004683.pool.root.1
[2025-11-26 08:19:16] -rw------- 1 boinc boinc        95 Nov 26 08:18 pilot_heartbeat.json
[2025-11-26 08:19:16] -rw------- 1 boinc boinc      1028 Nov 26 08:18 memory_monitor_summary.json
[2025-11-26 08:19:16] -rw------- 1 boinc boinc   1516240 Nov 26 08:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:19:16] -rw------- 1 boinc boinc   1255273 Nov 26 08:18 log.47556137._004683.job.log.tgz.1
[2025-11-26 08:19:16] -rw------- 1 boinc boinc      8568 Nov 26 08:18 heartbeat.json
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc        28 Nov 26 08:19 wrapper_checkpoint.txt
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc      8192 Nov 26 08:19 boinc_mmap_file
[2025-11-26 08:19:16] -rw------- 1 boinc boinc       816 Nov 26 08:19 pilotlog.txt
[2025-11-26 08:19:16] -rw------- 1 boinc boinc   3453443 Nov 26 08:19 log.47556137._004683.job.log.1
[2025-11-26 08:19:16] -rw------- 1 boinc boinc       353 Nov 26 08:19 output.list
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc       620 Nov 26 08:19 runtime_log
[2025-11-26 08:19:16] -rw------- 1 boinc boinc   4730880 Nov 26 08:19 result.tar.gz
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc      8898 Nov 26 08:19 runtime_log.err
[2025-11-26 08:19:16] -rw------- 1 boinc boinc       665 Nov 26 08:19 rHeLDmXa8g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtLKKDmQlE0zn.diag
[2025-11-26 08:19:16] -rw-r--r-- 1 boinc boinc      6111 Nov 26 08:19 stderr.txt
[2025-11-26 08:19:16] HITS file was successfully produced:
[2025-11-26 08:19:16] -rw------- 1 boinc boinc 916879736 Nov 26 08:18 shared/HITS.pool.root.1
[2025-11-26 08:19:16]  *** Contents of shared directory: ***
[2025-11-26 08:19:16] total 1300048
[2025-11-26 08:19:16] -rw-r--r-- 2 boinc boinc 409020635 Nov 26 01:30 ATLAS.root_0
[2025-11-26 08:19:16] -rw-r--r-- 2 boinc boinc    590106 Nov 26 01:30 input.tar.gz
[2025-11-26 08:19:16] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:30 start_atlas.sh
[2025-11-26 08:19:16] -rw------- 1 boinc boinc 916879736 Nov 26 08:18 HITS.pool.root.1
[2025-11-26 08:19:16] -rw------- 1 boinc boinc   4730880 Nov 26 08:19 result.tar.gz
08:19:17 (454673): run_atlas exited; CPU time 95917.261585
08:19:17 (454673): called boinc_finish(0)

</stderr_txt>
]]>

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