Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:56 (3993751): wrapper (7.7.26015): starting
00:18:56 (3993751): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:18:57] Arguments: --nthreads 9
[2025-11-23 00:18:57] Threads: 9
[2025-11-23 00:18:57] Checking for CVMFS
[2025-11-23 00:18:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:18:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:18:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:19:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:19:00] 2.13.2.0 6051 29657 209880 153198 1 63 33855580 40960000 12644 16776704 0 30755750 99.774 16630401 37655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:19:00] CVMFS is ok
[2025-11-23 00:19:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:19:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:19:00] Further information can be found at the LHC@home message board.
[2025-11-23 00:19:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:19:00] Checking for apptainer binary...
[2025-11-23 00:19:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:19:00] Running /usr/bin/apptainer --version
[2025-11-23 00:19:00] apptainer version 1.4.4-1.el9
[2025-11-23 00:19:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:19:02] c-210-37-3.aglt2.org
[2025-11-23 00:19:02] apptainer works
[2025-11-23 00:19:02] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:19:02] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:19:02] Starting ATLAS job with PandaID=6895348303
[2025-11-23 00:19:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:30:29]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:30:29] 2025-11-24 10:29:23,027 | INFO     | time since job start (104956s) is within the limit (172800.0s)
[2025-11-24 05:30:29] 2025-11-24 10:29:23,030 | INFO     | monitor loop #6305: job 0:6895348303 is in state 'finished'
[2025-11-24 05:30:29] 2025-11-24 10:29:23,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:30:29] 2025-11-24 10:29:25,037 | INFO     | time since job start (104958s) is within the limit (172800.0s)
[2025-11-24 05:30:29] 2025-11-24 10:29:25,545 | INFO     | monitor loop #6306: job 0:6895348303 is in state 'finished'
[2025-11-24 05:30:29] 2025-11-24 10:29:25,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:30:29] 2025-11-24 10:29:27,046 | INFO     | time since job start (104960s) is within the limit (172800.0s)
[2025-11-24 05:30:29] 2025-11-24 10:29:28,092 | INFO     | monitor loop #6307: job 0:6895348303 is in state 'finished'
[2025-11-24 05:30:29] 2025-11-24 10:29:28,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:30:29] 2025-11-24 10:29:28,344 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 05:30:29] 2025-11-24 10:29:28,350 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2760.2490535714287
[2025-11-24 05:30:29] 2025-11-24 10:29:28,361 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895348303/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:30:29] 2025-11-24 10:29:28,363 | INFO     | extracted standard info from prmon json
[2025-11-24 05:30:29] 2025-11-24 10:29:28,363 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:30:29] 2025-11-24 10:29:28,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:30:29] 2025-11-24 10:29:28,560 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:30:29] 2025-11-24 10:29:28,566 | INFO     | sum of square deviations: 1572357835630.998
[2025-11-24 05:30:29] 2025-11-24 10:29:28,668 | INFO     | sum of deviations: 7213147227409.472
[2025-11-24 05:30:29] 2025-11-24 10:29:28,669 | INFO     | mean x: 1763927716.3218858
[2025-11-24 05:30:29] 2025-11-24 10:29:28,669 | INFO     | mean y: 3072018.5488940626
[2025-11-24 05:30:29] 2025-11-24 10:29:28,669 | INFO     | intersect: -8088896633.886965
[2025-11-24 05:30:29] 2025-11-24 10:29:28,675 | INFO     | chi2: 15.46894361118736
[2025-11-24 05:30:29] 2025-11-24 10:29:28,677 | INFO     | sum of square deviations: 1558673051020.1267
[2025-11-24 05:30:29] 2025-11-24 10:29:28,778 | INFO     | sum of deviations: 7852532346234.59
[2025-11-24 05:30:29] 2025-11-24 10:29:28,779 | INFO     | mean x: 1763927563.841798
[2025-11-24 05:30:29] 2025-11-24 10:29:28,779 | INFO     | mean y: 3079142.131348511
[2025-11-24 05:30:29] 2025-11-24 10:29:28,779 | INFO     | intersect: -8883517211.36116
[2025-11-24 05:30:29] 2025-11-24 10:29:28,781 | INFO     | chi2: 12.0596957156491
[2025-11-24 05:30:29] 2025-11-24 10:29:28,781 | INFO     | current chi2=12.0596957156491 (change=22.039306504890497 %)
[2025-11-24 05:30:29] 2025-11-24 10:29:28,781 | INFO     | right removable region: 1712
[2025-11-24 05:30:29] 2025-11-24 10:29:28,787 | INFO     | sum of square deviations: 1558665901820.1265
[2025-11-24 05:30:29] 2025-11-24 10:29:28,885 | INFO     | sum of deviations: 6481646402746.805
[2025-11-24 05:30:29] 2025-11-24 10:29:28,885 | INFO     | mean x: 1763927868.841798
[2025-11-24 05:30:29] 2025-11-24 10:29:28,885 | INFO     | mean y: 3080166.3129013428
[2025-11-24 05:30:29] 2025-11-24 10:29:28,885 | INFO     | intersect: -7332139467.626771
[2025-11-24 05:30:29] 2025-11-24 10:29:28,891 | INFO     | chi2: 11.409218460921887
[2025-11-24 05:30:29] 2025-11-24 10:29:28,891 | INFO     | current chi2=11.409218460921887 (change=26.24435935838193 %)
[2025-11-24 05:30:29] 2025-11-24 10:29:28,893 | INFO     | sum of square deviations: 1545053643920.392
[2025-11-24 05:30:29] 2025-11-24 10:29:28,994 | INFO     | sum of deviations: 5959110135843.396
[2025-11-24 05:30:29] 2025-11-24 10:29:28,995 | INFO     | mean x: 1763928021.3618267
[2025-11-24 05:30:29] 2025-11-24 10:29:28,995 | INFO     | mean y: 3086019.4783372367
[2025-11-24 05:30:29] 2025-11-24 10:29:28,995 | INFO     | intersect: -6800199673.776883
[2025-11-24 05:30:29] 2025-11-24 10:29:28,997 | INFO     | chi2: 9.441225912046821
[2025-11-24 05:30:29] 2025-11-24 10:29:28,997 | INFO     | current chi2=9.441225912046821 (change=17.249144239070407 %)
[2025-11-24 05:30:29] 2025-11-24 10:29:28,997 | INFO     | left removable region: 20
[2025-11-24 05:30:29] 2025-11-24 10:29:29,003 | INFO     | sum of square deviations: 1502037684412.9155
[2025-11-24 05:30:29] 2025-11-24 10:29:29,094 | INFO     | time since job start (104962s) is within the limit (172800.0s)
[2025-11-24 05:30:29] 2025-11-24 10:29:29,104 | INFO     | sum of deviations: 6449686821637.743
[2025-11-24 05:30:29] 2025-11-24 10:29:29,104 | INFO     | mean x: 1763928143.4154847
[2025-11-24 05:30:29] 2025-11-24 10:29:29,104 | INFO     | mean y: 3097516.7429078016
[2025-11-24 05:30:29] 2025-11-24 10:29:29,104 | INFO     | intersect: -7571135952.205975
[2025-11-24 05:30:29] 2025-11-24 10:29:29,110 | INFO     | chi2: 5.3453205920900775
[2025-11-24 05:30:29] 2025-11-24 10:29:29,111 | INFO     | current memory leak: 4.29 B/s (using 1692 data points, chi2=5.35)
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | could have reported an average CPU frequency of 2812 MHz (60 samples)
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | ..............................
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | . Timing measurements:
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | . get job = 0 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | . initial setup = 3 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | . payload setup = 42 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,112 | INFO     | . stage-in = 0 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,113 | INFO     | . payload execution = 104803 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,113 | INFO     | . stage-out = 9 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,113 | INFO     | . log creation = 3 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,113 | INFO     | ..............................
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | 
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | job summary report
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | --------------------------------------------------
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | PanDA job id: 6895348303
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | task id: 47556137
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | errors: (none)
[2025-11-24 05:30:29] 2025-11-24 10:29:29,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | pilot state: finished 
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | transexitcode: 0
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | exeerrorcode: 0
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | exeerrordiag: 
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | exitcode: 0
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | exitmsg: OK
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | cpuconsumptiontime: 241727 s
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | nevents: 1000
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | neventsw: 0
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | pid: 4008008
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | pgrp: 4008008
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | corecount: 9
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | event service: False
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | sizes: {0: 2298584, 1: 2298783, 12: 2298783, 23: 2298811, 31: 2299101, 34: 2299129, 104850: 2373248, 104861: 2382242, 104865: 2382298, 104899: 2382544}
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | --------------------------------------------------
[2025-11-24 05:30:29] 2025-11-24 10:29:29,290 | INFO     | 
[2025-11-24 05:30:29] 2025-11-24 10:29:29,291 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 05:30:29] 2025-11-24 10:29:29,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:30:29] 2025-11-24 10:29:29,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:30:29] 2025-11-24 10:29:29,314 | INFO     | job 6895348303 has completed (purged errors)
[2025-11-24 05:30:29] 2025-11-24 10:29:29,314 | INFO     | overall cleanup function is called
[2025-11-24 05:30:29] 2025-11-24 10:29:30,355 | INFO     | --- collectZombieJob: --- 10, [4008008]
[2025-11-24 05:30:29] 2025-11-24 10:29:30,355 | INFO     | zombie collector waiting for pid 4008008
[2025-11-24 05:30:29] 2025-11-24 10:29:30,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:30:29] 2025-11-24 10:29:30,355 | INFO     | collected zombie processes
[2025-11-24 05:30:29] 2025-11-24 10:29:30,356 | INFO     | will attempt to kill all subprocesses of pid=4008008
[2025-11-24 05:30:29] 2025-11-24 10:29:30,842 | INFO     | process IDs to be killed: [4008008] (in reverse order)
[2025-11-24 05:30:29] 2025-11-24 10:29:31,246 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:30:29] 2025-11-24 10:29:31,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:30:29] 2025-11-24 10:29:31,261 | INFO     | did not find any defunct processes belonging to 4008008
[2025-11-24 05:30:29] 2025-11-24 10:29:31,277 | INFO     | did not find any defunct processes belonging to 4008008
[2025-11-24 05:30:29] 2025-11-24 10:29:31,320 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:30:29] 2025-11-24 10:29:31,320 | INFO     | ready for new job
[2025-11-24 05:30:29] 2025-11-24 10:29:31,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:30:29] 2025-11-24 10:29:31,353 | INFO     | ***************************************
[2025-11-24 05:30:29] 2025-11-24 10:29:31,354 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:30:29] 2025-11-24 10:29:31,354 | INFO     | ***************************************
[2025-11-24 05:30:29] 2025-11-24 10:29:31,354 | INFO     | 
[2025-11-24 05:30:29] 2025-11-24 10:29:31,389 | INFO     | architecture information:
[2025-11-24 05:30:29] 2025-11-24 10:29:31,393 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:30:29] 2025-11-24 10:29:31,439 | INFO     | cat /etc/os-release:
[2025-11-24 05:30:29] NAME="CentOS Linux"
[2025-11-24 05:30:29] VERSION="7 (Core)"
[2025-11-24 05:30:29] ID="centos"
[2025-11-24 05:30:29] ID_LIKE="rhel fedora"
[2025-11-24 05:30:29] VERSION_ID="7"
[2025-11-24 05:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:30:29] ANSI_COLOR="0;31"
[2025-11-24 05:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:30:29] HOME_URL="https://www.centos.org/"
[2025-11-24 05:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:30:29] 
[2025-11-24 05:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:30:29] 
[2025-11-24 05:30:29] 2025-11-24 10:29:31,440 | INFO     | ***************************************
[2025-11-24 05:30:29] 2025-11-24 10:29:31,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 05:30:29] 2025-11-24 10:29:32,026 | INFO     | sufficient remaining disk space (71144833024 B)
[2025-11-24 05:30:29] 2025-11-24 10:29:32,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:30:29] 2025-11-24 10:29:32,027 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:30:29] 2025-11-24 10:29:32,027 | INFO     | update_server=False
[2025-11-24 05:30:29] 2025-11-24 10:29:32,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:30:29] 2025-11-24 10:29:32,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:30:29] 2025-11-24 10:29:32,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:30:29] 2025-11-24 10:29:32,028 | INFO     | aborting loop
[2025-11-24 05:30:29] 2025-11-24 10:29:32,610 | INFO     | all data control threads have been joined
[2025-11-24 05:30:29] 2025-11-24 10:29:32,751 | INFO     | all payload control threads have been joined
[2025-11-24 05:30:29] 2025-11-24 10:29:33,032 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,033 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:30:29] 2025-11-24 10:29:33,129 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,434 | INFO     | all job control threads have been joined
[2025-11-24 05:30:29] 2025-11-24 10:29:33,494 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,586 | INFO     | [job] validate thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,616 | INFO     | [data] control thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,762 | INFO     | [payload] control thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,833 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,835 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:33,924 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:34,034 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:34,158 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:34,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:34,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:30:29] 2025-11-24 10:29:34,447 | INFO     | [job] control thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:35,321 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:29:37,064 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:30:29] 2025-11-24 10:30:02,886 | INFO     | PID=3999948 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 05:30:29] 2025-11-24 10:30:02,886 | INFO     | .. there are 11 such processes running
[2025-11-24 05:30:29] 2025-11-24 10:30:02,891 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:30:29] 2025-11-24 10:30:02,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:30:29] 2025-11-24 10:30:02,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:30:29] 2025-11-24 10:30:22,247 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:30:29] 2025-11-24 10:30:23,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139772907349824)>', '<ExcThread(monitor, started 139772546750208)>']
[2025-11-24 05:30:29] 2025-11-24 10:30:24,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:30:29] 2025-11-24 10:30:24,039 | INFO     | [monitor] control thread has ended
[2025-11-24 05:30:29] 2025-11-24 10:30:28,273 | INFO     | all workflow threads have been joined
[2025-11-24 05:30:29] 2025-11-24 10:30:28,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:30:29] 2025-11-24 10:30:28,273 | INFO     | traces error code: 0
[2025-11-24 05:30:29] 2025-11-24 10:30:28,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:30:29] 2025-11-24 10:30:28,617 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:30:29] 2025-11-24 10:30:28,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:30:29] 2025-11-24 10:30:28,676 [wrapper] pilotpid: 3999948
[2025-11-24 05:30:29] 2025-11-24 10:30:28,704 [wrapper] Pilot exit status: 0
[2025-11-24 05:30:29] 2025-11-24 10:30:28,813 [wrapper] pandaids: 6895348303
[2025-11-24 05:30:29] 2025-11-24 10:30:28,993 [wrapper] cleanup supervisor_pilot 2238241 3999949
[2025-11-24 05:30:29] 2025-11-24 10:30:29,011 [wrapper] Test setup, not cleaning
[2025-11-24 05:30:29] 2025-11-24 10:30:29,034 [wrapper] apfmon messages muted
[2025-11-24 05:30:29] 2025-11-24 10:30:29,055 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:30:29] 2025-11-24 10:30:29,108 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:30:29]  *** Error codes and diagnostics ***
[2025-11-24 05:30:29]     "exeErrorCode": 0,
[2025-11-24 05:30:29]     "exeErrorDiag": "",
[2025-11-24 05:30:29]     "pilotErrorCode": 0,
[2025-11-24 05:30:29]     "pilotErrorDiag": "",
[2025-11-24 05:30:29]  *** Listing of results directory ***
[2025-11-24 05:30:29] total 1327312
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 14:34 queuedata.json
[2025-11-24 05:30:29] -rwx------. 1 boincer umatlas     36292 Nov 22 14:35 runpilot2-wrapper.sh
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:30:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:18 run_atlas
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:18 job.xml
[2025-11-24 05:30:29] -rw-r--r--. 2 boincer umatlas 409282482 Nov 23 00:18 EVNT.47483658._000474.pool.root.1
[2025-11-24 05:30:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:18 start_atlas.sh
[2025-11-24 05:30:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:18 shared
[2025-11-24 05:30:29] -rw-r--r--. 2 boincer umatlas    590109 Nov 23 00:18 input.tar.gz
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:18 boinc_lockfile
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:19 pandaJob.out
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas        57 Nov 23 00:19 setup.sh.local
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas    989784 Nov 23 00:20 agis_schedconf.cvmfs.json
[2025-11-24 05:30:29] drwx------. 5 boincer umatlas      4096 Nov 23 00:20 pilot3
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas       533 Nov 24 05:05 boinc_task_state.xml
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas 914016057 Nov 24 05:27 HITS.47556137._004694.pool.root.1
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas      6843 Nov 24 05:27 init_data.xml
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas      1060 Nov 24 05:28 memory_monitor_summary.json
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas   1526164 Nov 24 05:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas   2760214 Nov 24 05:28 log.47556137._004694.job.log.tgz.1
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas      8621 Nov 24 05:29 heartbeat.json
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas        95 Nov 24 05:29 pilot_heartbeat.json
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 05:30 boinc_mmap_file
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas        29 Nov 24 05:30 wrapper_checkpoint.txt
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas      4824 Nov 24 05:30 pilotlog.txt
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas  13209879 Nov 24 05:30 log.47556137._004694.job.log.1
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas       353 Nov 24 05:30 output.list
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas       620 Nov 24 05:30 runtime_log
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas  15994880 Nov 24 05:30 result.tar.gz
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas       664 Nov 24 05:30 uVxMDmRZ8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6EIKDmofO64n.diag
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas      9354 Nov 24 05:30 runtime_log.err
[2025-11-24 05:30:29] -rw-r--r--. 1 boincer umatlas     21588 Nov 24 05:30 stderr.txt
[2025-11-24 05:30:29] HITS file was successfully produced:
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas 914016057 Nov 24 05:27 shared/HITS.pool.root.1
[2025-11-24 05:30:29]  *** Contents of shared directory: ***
[2025-11-24 05:30:29] total 1308508
[2025-11-24 05:30:29] -rw-r--r--. 2 boincer umatlas 409282482 Nov 23 00:18 ATLAS.root_0
[2025-11-24 05:30:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:18 start_atlas.sh
[2025-11-24 05:30:29] -rw-r--r--. 2 boincer umatlas    590109 Nov 23 00:18 input.tar.gz
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas 914016057 Nov 24 05:27 HITS.pool.root.1
[2025-11-24 05:30:29] -rw-------. 1 boincer umatlas  15994880 Nov 24 05:30 result.tar.gz
05:30:31 (3993751): run_atlas exited; CPU time 242927.565810
05:30:31 (3993751): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN