Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:21:29 (27950): wrapper (7.7.26015): starting
01:21:29 (27950): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 01:21:29] Arguments: --nthreads 4
[2025-11-23 01:21:29] Threads: 4
[2025-11-23 01:21:29] Checking for CVMFS
[2025-11-23 01:21:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:21:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:21:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:21:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:21:29] 2.11.2.0 2311 102757 79456 153199 1 80 10690240 20275200 1 130560 0 39177653 99.938 4524946 40506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 01:21:29] CVMFS is ok
[2025-11-23 01:21:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:21:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 01:21:29] Further information can be found at the LHC@home message board.
[2025-11-23 01:21:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:21:29] Checking for apptainer binary...
[2025-11-23 01:21:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:21:29] Running /usr/bin/apptainer --version
[2025-11-23 01:21:29] apptainer version 1.3.2-1.el7
[2025-11-23 01:21:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:21:30] c-205-34.aglt2.org
[2025-11-23 01:21:30] apptainer works
[2025-11-23 01:21:30] Set ATHENA_PROC_NUMBER=4
[2025-11-23 01:21:30] Set ATHENA_CORE_NUMBER=4
[2025-11-23 01:21:30] Starting ATLAS job with PandaID=6893887813
[2025-11-23 01:21:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:13:32 (21660): wrapper (7.7.26015): starting
07:13:32 (21660): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 07:13:32] Arguments: --nthreads 4
[2025-11-23 07:13:32] Threads: 4
[2025-11-23 07:13:32] This job has been restarted, cleaning up previous attempt
[2025-11-23 07:13:32] Checking for CVMFS
[2025-11-23 07:13:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:13:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:13:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:13:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:13:33] 2.11.2.0 2311 103109 79692 153208 3 1 11099303 20275200 1 130560 0 39320072 99.939 4539390 40536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 07:13:33] CVMFS is ok
[2025-11-23 07:13:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:13:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:13:33] Further information can be found at the LHC@home message board.
[2025-11-23 07:13:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:13:33] Checking for apptainer binary...
[2025-11-23 07:13:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:13:33] Running /usr/bin/apptainer --version
[2025-11-23 07:13:33] apptainer version 1.3.2-1.el7
[2025-11-23 07:13:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:13:34] c-205-34.aglt2.org
[2025-11-23 07:13:34] apptainer works
[2025-11-23 07:13:34] Set ATHENA_PROC_NUMBER=4
[2025-11-23 07:13:34] Set ATHENA_CORE_NUMBER=4
[2025-11-23 07:13:34] Starting ATLAS job with PandaID=6893887813
[2025-11-23 07:13:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:24:45]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:24:45] 2025-11-23 21:23:54,045 | INFO     | PID=25726 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 16:24:45] 2025-11-23 21:23:55,046 | INFO     | time since job start (33011s) is within the limit (172800.0s)
[2025-11-23 16:24:45] 2025-11-23 21:23:55,082 | INFO     | monitor loop #2464: job 0:6893887813 is in state 'finished'
[2025-11-23 16:24:45] 2025-11-23 21:23:55,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,438 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 16:24:45] 2025-11-23 21:23:56,439 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 2607.55875
[2025-11-23 16:24:45] 2025-11-23 21:23:56,439 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893887813/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,440 | INFO     | extracted standard info from prmon json
[2025-11-23 16:24:45] 2025-11-23 21:23:56,440 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:24:45] 2025-11-23 21:23:56,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:24:45] 2025-11-23 21:23:56,444 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:24:45] 2025-11-23 21:23:56,444 | INFO     | sum of square deviations: 49098557790.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,447 | INFO     | sum of deviations: 234640809772.00012
[2025-11-23 16:24:45] 2025-11-23 21:23:56,447 | INFO     | mean x: 1763916517.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,448 | INFO     | mean y: 2263980.580406654
[2025-11-23 16:24:45] 2025-11-23 21:23:56,448 | INFO     | intersect: -8427450018.134708
[2025-11-23 16:24:45] 2025-11-23 21:23:56,448 | INFO     | chi2: 2.312379428726356
[2025-11-23 16:24:45] 2025-11-23 21:23:56,448 | INFO     | sum of square deviations: 47749769710.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,451 | INFO     | sum of deviations: 303872233433.49994
[2025-11-23 16:24:45] 2025-11-23 21:23:56,451 | INFO     | mean x: 1763916364.5
[2025-11-23 16:24:45] 2025-11-23 21:23:56,451 | INFO     | mean y: 2271784.069029851
[2025-11-23 16:24:45] 2025-11-23 21:23:56,452 | INFO     | intersect: -11223022254.537853
[2025-11-23 16:24:45] 2025-11-23 21:23:56,452 | INFO     | chi2: 1.229723438004032
[2025-11-23 16:24:45] 2025-11-23 21:23:56,452 | INFO     | current chi2=1.229723438004032 (change=46.81999750009211 %)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,452 | INFO     | sum of square deviations: 46425912330.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,455 | INFO     | sum of deviations: 298339230598.99976
[2025-11-23 16:24:45] 2025-11-23 21:23:56,455 | INFO     | mean x: 1763916212.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,455 | INFO     | mean y: 2271146.694915254
[2025-11-23 16:24:45] 2025-11-23 21:23:56,455 | INFO     | intersect: -11332894477.807571
[2025-11-23 16:24:45] 2025-11-23 21:23:56,456 | INFO     | chi2: 1.2290993885198216
[2025-11-23 16:24:45] 2025-11-23 21:23:56,456 | INFO     | current chi2=1.2290993885198216 (change=0.0507471407736492 %)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,456 | INFO     | right removable region: 530
[2025-11-23 16:24:45] 2025-11-23 21:23:56,456 | INFO     | sum of square deviations: 47749769710.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,459 | INFO     | sum of deviations: 169656290626.00006
[2025-11-23 16:24:45] 2025-11-23 21:23:56,459 | INFO     | mean x: 1763916669.5
[2025-11-23 16:24:45] 2025-11-23 21:23:56,459 | INFO     | mean y: 2271295.854477612
[2025-11-23 16:24:45] 2025-11-23 21:23:56,459 | INFO     | intersect: -6264974827.807259
[2025-11-23 16:24:45] 2025-11-23 21:23:56,460 | INFO     | chi2: 1.1372064031381568
[2025-11-23 16:24:45] 2025-11-23 21:23:56,460 | INFO     | current chi2=1.1372064031381568 (change=50.82094274794156 %)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,460 | INFO     | sum of square deviations: 46425912330.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,463 | INFO     | sum of deviations: 154500812627.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,463 | INFO     | mean x: 1763916822.0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,463 | INFO     | mean y: 2273041.088512241
[2025-11-23 16:24:45] 2025-11-23 21:23:56,463 | INFO     | intersect: -5867866472.127497
[2025-11-23 16:24:45] 2025-11-23 21:23:56,463 | INFO     | chi2: 1.1221801148570718
[2025-11-23 16:24:45] 2025-11-23 21:23:56,464 | INFO     | current chi2=1.1221801148570718 (change=1.3213334219381347 %)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,464 | INFO     | left removable region: 20
[2025-11-23 16:24:45] 2025-11-23 21:23:56,464 | INFO     | sum of square deviations: 41132706107.5
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | sum of deviations: 193380104070.5
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | mean x: 1763916791.5
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | mean y: 2283372.78627451
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | intersect: -8290543552.349494
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | chi2: 0.02300481950522395
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | current memory leak: 4.70 B/s (using 510 data points, chi2=0.02)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,467 | INFO     | could have reported an average CPU frequency of 3158 MHz (21 samples)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | ..............................
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . Timing measurements:
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . get job = 0 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . initial setup = 2 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . payload setup = 4 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . stage-in = 0 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . payload execution = 32984 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . stage-out = 2 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | . log creation = 0 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,468 | INFO     | ..............................
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | 
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | job summary report
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | --------------------------------------------------
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | PanDA job id: 6893887813
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | task id: 47523449
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | errors: (none)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | pilot state: finished 
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | transexitcode: 0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | exeerrorcode: 0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | exeerrordiag: 
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | exitcode: 0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | exitmsg: OK
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | cpuconsumptiontime: 129879 s
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | nevents: 1000
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | neventsw: 0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | pid: 32123
[2025-11-23 16:24:45] 2025-11-23 21:23:56,505 | INFO     | pgrp: 32123
[2025-11-23 16:24:45] 2025-11-23 21:23:56,506 | INFO     | corecount: 4
[2025-11-23 16:24:45] 2025-11-23 21:23:56,506 | INFO     | event service: False
[2025-11-23 16:24:45] 2025-11-23 21:23:56,506 | INFO     | sizes: {0: 2298807, 3: 2299069, 10: 2299097, 32992: 2339829, 32994: 2348823, 32995: 2348879, 32999: 2349253}
[2025-11-23 16:24:45] 2025-11-23 21:23:56,506 | INFO     | --------------------------------------------------
[2025-11-23 16:24:45] 2025-11-23 21:23:56,506 | INFO     | 
[2025-11-23 16:24:45] 2025-11-23 21:23:56,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:24:45] 2025-11-23 21:23:56,518 | INFO     | job 6893887813 has completed (purged errors)
[2025-11-23 16:24:45] 2025-11-23 21:23:56,518 | INFO     | overall cleanup function is called
[2025-11-23 16:24:45] 2025-11-23 21:23:57,523 | INFO     | --- collectZombieJob: --- 10, [32123]
[2025-11-23 16:24:45] 2025-11-23 21:23:57,523 | INFO     | zombie collector waiting for pid 32123
[2025-11-23 16:24:45] 2025-11-23 21:23:57,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:24:45] 2025-11-23 21:23:57,523 | INFO     | collected zombie processes
[2025-11-23 16:24:45] 2025-11-23 21:23:57,523 | INFO     | will attempt to kill all subprocesses of pid=32123
[2025-11-23 16:24:45] 2025-11-23 21:23:57,556 | INFO     | process IDs to be killed: [32123] (in reverse order)
[2025-11-23 16:24:45] 2025-11-23 21:23:57,578 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:24:45] 2025-11-23 21:23:57,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:24:45] 2025-11-23 21:23:57,582 | INFO     | did not find any defunct processes belonging to 32123
[2025-11-23 16:24:45] 2025-11-23 21:23:57,583 | INFO     | did not find any defunct processes belonging to 32123
[2025-11-23 16:24:45] 2025-11-23 21:23:57,584 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:24:45] 2025-11-23 21:23:57,584 | INFO     | ready for new job
[2025-11-23 16:24:45] 2025-11-23 21:23:57,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:24:45] 2025-11-23 21:23:57,586 | INFO     | ***************************************
[2025-11-23 16:24:45] 2025-11-23 21:23:57,586 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:24:45] 2025-11-23 21:23:57,586 | INFO     | ***************************************
[2025-11-23 16:24:45] 2025-11-23 21:23:57,586 | INFO     | 
[2025-11-23 16:24:45] 2025-11-23 21:23:57,586 | INFO     | architecture information:
[2025-11-23 16:24:45] 2025-11-23 21:23:57,587 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:24:45] 2025-11-23 21:23:57,595 | INFO     | cat /etc/os-release:
[2025-11-23 16:24:45] NAME="CentOS Linux"
[2025-11-23 16:24:45] VERSION="7 (Core)"
[2025-11-23 16:24:45] ID="centos"
[2025-11-23 16:24:45] ID_LIKE="rhel fedora"
[2025-11-23 16:24:45] VERSION_ID="7"
[2025-11-23 16:24:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:24:45] ANSI_COLOR="0;31"
[2025-11-23 16:24:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:24:45] HOME_URL="https://www.centos.org/"
[2025-11-23 16:24:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:24:45] 
[2025-11-23 16:24:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:24:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:24:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:24:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:24:45] 
[2025-11-23 16:24:45] 2025-11-23 21:23:57,595 | INFO     | ***************************************
[2025-11-23 16:24:45] 2025-11-23 21:23:58,097 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 16:24:45] 2025-11-23 21:23:58,113 | INFO     | sufficient remaining disk space (28245491712 B)
[2025-11-23 16:24:45] 2025-11-23 21:23:58,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:24:45] 2025-11-23 21:23:58,114 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:24:45] 2025-11-23 21:23:58,114 | INFO     | update_server=False
[2025-11-23 16:24:45] 2025-11-23 21:23:58,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:24:45] 2025-11-23 21:23:58,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:24:45] 2025-11-23 21:23:58,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:24:45] 2025-11-23 21:23:58,585 | INFO     | all data control threads have been joined
[2025-11-23 16:24:45] 2025-11-23 21:23:58,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:24:45] 2025-11-23 21:23:58,590 | INFO     | aborting loop
[2025-11-23 16:24:45] 2025-11-23 21:23:58,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:24:45] 2025-11-23 21:23:59,119 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:23:59,120 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:23:59,210 | INFO     | all job control threads have been joined
[2025-11-23 16:24:45] 2025-11-23 21:23:59,324 | INFO     | all payload control threads have been joined
[2025-11-23 16:24:45] 2025-11-23 21:23:59,501 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:23:59,590 | INFO     | [data] control thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:23:59,596 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,021 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,120 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,140 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,201 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,202 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,231 | INFO     | [job] control thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,329 | INFO     | [payload] control thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,349 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,430 | INFO     | [job] validate thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:00,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:02,862 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:24:45] 2025-11-23 21:24:28,165 | INFO     | PID=25726 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 16:24:45] 2025-11-23 21:24:28,165 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:24:45] 2025-11-23 21:24:28,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:24:45] 2025-11-23 21:24:28,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:24:45] 2025-11-23 21:24:39,199 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:24:45] 2025-11-23 21:24:40,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629536905024)>', '<ExcThread(monitor, started 140628352554752)>']
[2025-11-23 16:24:45] 2025-11-23 21:24:41,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:24:45] 2025-11-23 21:24:41,206 | INFO     | [monitor] control thread has ended
[2025-11-23 16:24:45] 2025-11-23 21:24:45,395 | INFO     | all workflow threads have been joined
[2025-11-23 16:24:45] 2025-11-23 21:24:45,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:24:45] 2025-11-23 21:24:45,395 | INFO     | traces error code: 0
[2025-11-23 16:24:45] 2025-11-23 21:24:45,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:24:45] 2025-11-23 21:24:45,455 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:24:45] 2025-11-23 21:24:45,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:24:45] 2025-11-23 21:24:45,458 [wrapper] pilotpid: 25726
[2025-11-23 16:24:45] 2025-11-23 21:24:45,460 [wrapper] Pilot exit status: 0
[2025-11-23 16:24:45] 2025-11-23 21:24:45,466 [wrapper] pandaids: 6893887813 6893887813
[2025-11-23 16:24:45] 2025-11-23 21:24:45,480 [wrapper] cleanup supervisor_pilot 12731 25727
[2025-11-23 16:24:45] 2025-11-23 21:24:45,482 [wrapper] Test setup, not cleaning
[2025-11-23 16:24:45] 2025-11-23 21:24:45,484 [wrapper] apfmon messages muted
[2025-11-23 16:24:45] 2025-11-23 21:24:45,486 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:24:45] 2025-11-23 21:24:45,488 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:24:45]  *** Error codes and diagnostics ***
[2025-11-23 16:24:45]     "exeErrorCode": 0,
[2025-11-23 16:24:45]     "exeErrorDiag": "",
[2025-11-23 16:24:45]     "pilotErrorCode": 0,
[2025-11-23 16:24:45]     "pilotErrorDiag": "",
[2025-11-23 16:24:45]  *** Listing of results directory ***
[2025-11-23 16:24:45] total 1717024
[2025-11-23 16:24:45] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 18:11 pilot3.tar.gz
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 18:45 queuedata.json
[2025-11-23 16:24:45] -rwx------ 1 boincer umatlas     36292 Nov 20 18:45 runpilot2-wrapper.sh
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas       100 Nov 23 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:24:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 01:21 run_atlas
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas       105 Nov 23 01:21 job.xml
[2025-11-23 16:24:45] -rw-r--r-- 3 boincer umatlas 410462588 Nov 23 01:21 EVNT.47493127._000986.pool.root.1
[2025-11-23 16:24:45] -rw-r--r-- 3 boincer umatlas 410462588 Nov 23 01:21 ATLAS.root_0
[2025-11-23 16:24:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:21 start_atlas.sh
[2025-11-23 16:24:45] drwxrwx--x 2 boincer umatlas      4096 Nov 23 01:21 shared
[2025-11-23 16:24:45] -rw-r--r-- 2 boincer umatlas    590107 Nov 23 01:21 input.tar.gz
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas         0 Nov 23 01:21 boinc_lockfile
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 07:13 pandaJob.out
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas        57 Nov 23 07:13 setup.sh.local
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas    989784 Nov 23 07:13 agis_schedconf.cvmfs.json
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas       533 Nov 23 16:19 boinc_task_state.xml
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas      6240 Nov 23 16:19 init_data.xml
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas 921457653 Nov 23 16:23 HITS.47523449._009860.pool.root.1
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas      1049 Nov 23 16:23 memory_monitor_summary.json
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas   1526164 Nov 23 16:23 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas   1361217 Nov 23 16:23 log.47523449._009860.job.log.tgz.1
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas      8657 Nov 23 16:23 heartbeat.json
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas        96 Nov 23 16:24 pilot_heartbeat.json
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 16:24 boinc_mmap_file
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas        29 Nov 23 16:24 wrapper_checkpoint.txt
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas      4746 Nov 23 16:24 pilotlog.txt
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas   4595086 Nov 23 16:24 log.47523449._009860.job.log.1
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas       353 Nov 23 16:24 output.list
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas       620 Nov 23 16:24 runtime_log
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas   5980160 Nov 23 16:24 result.tar.gz
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas      9428 Nov 23 16:24 runtime_log.err
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas       790 Nov 23 16:24 JGjNDmCWTg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmgIKDmtoONwn.diag
[2025-11-23 16:24:45] -rw-r--r-- 1 boincer umatlas     23490 Nov 23 16:24 stderr.txt
[2025-11-23 16:24:45] HITS file was successfully produced:
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas 921457653 Nov 23 16:23 shared/HITS.pool.root.1
[2025-11-23 16:24:45]  *** Contents of shared directory: ***
[2025-11-23 16:24:45] total 1307152
[2025-11-23 16:24:45] -rw-r--r-- 3 boincer umatlas 410462588 Nov 23 01:21 ATLAS.root_0
[2025-11-23 16:24:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:21 start_atlas.sh
[2025-11-23 16:24:45] -rw-r--r-- 2 boincer umatlas    590107 Nov 23 01:21 input.tar.gz
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas 921457653 Nov 23 16:23 HITS.pool.root.1
[2025-11-23 16:24:45] -rw------- 1 boincer umatlas   5980160 Nov 23 16:24 result.tar.gz
16:24:47 (21660): run_atlas exited; CPU time 129819.701674
16:24:47 (21660): called boinc_finish(0)

</stderr_txt>
]]>

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