Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:07:00 (31971): wrapper (7.7.26015): starting
02:07:00 (31971): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:07:00] Arguments: --nthreads 8
[2025-11-26 02:07:00] Threads: 8
[2025-11-26 02:07:00] Checking for CVMFS
[2025-11-26 02:07:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:07:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:07:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:07:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:07:01] 2.11.2.0 20854 171494 138316 153303 1 278 19820838 25165825 2018 130560 10 58456593 99.886 28292663 2281 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 02:07:01] CVMFS is ok
[2025-11-26 02:07:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:07:01] Checking for apptainer binary...
[2025-11-26 02:07:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:07:01] Running /usr/bin/apptainer --version
[2025-11-26 02:07:01] apptainer version 1.3.2-1.el7
[2025-11-26 02:07:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:07:02] cg-vwn379.simple-grid.lan
[2025-11-26 02:07:02] apptainer works
[2025-11-26 02:07:02] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:07:02] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:07:02] Starting ATLAS job with PandaID=6893887712
[2025-11-26 02:07:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:43:08]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:43:08] 2025-11-27 00:42:16,481 | INFO     | monitor loop #5728: job 0:6893887712 is in state 'finished'
[2025-11-27 01:43:08] 2025-11-27 00:42:16,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:43:08] 2025-11-27 00:42:18,420 | INFO     | time since job start (84888s) is within the limit (172800.0s)
[2025-11-27 01:43:08] 2025-11-27 00:42:18,988 | INFO     | monitor loop #5729: job 0:6893887712 is in state 'finished'
[2025-11-27 01:43:08] 2025-11-27 00:42:18,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:43:08] 2025-11-27 00:42:20,433 | INFO     | time since job start (84890s) is within the limit (172800.0s)
[2025-11-27 01:43:08] 2025-11-27 00:42:21,492 | INFO     | monitor loop #5730: job 0:6893887712 is in state 'finished'
[2025-11-27 01:43:08] 2025-11-27 00:42:21,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:43:08] 2025-11-27 00:42:22,440 | INFO     | time since job start (84892s) is within the limit (172800.0s)
[2025-11-27 01:43:08] 2025-11-27 00:42:24,005 | INFO     | monitor loop #5731: job 0:6893887712 is in state 'finished'
[2025-11-27 01:43:08] 2025-11-27 00:42:24,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:43:08] 2025-11-27 00:42:24,449 | INFO     | time since job start (84894s) is within the limit (172800.0s)
[2025-11-27 01:43:08] 2025-11-27 00:42:26,455 | INFO     | time since job start (84896s) is within the limit (172800.0s)
[2025-11-27 01:43:08] 2025-11-27 00:42:26,510 | INFO     | monitor loop #5732: job 0:6893887712 is in state 'finished'
[2025-11-27 01:43:08] 2025-11-27 00:42:26,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:43:08] 2025-11-27 00:42:27,874 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:43:08] 2025-11-27 00:42:27,876 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 01:43:08] 2025-11-27 00:42:27,878 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6893887712/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:43:08] 2025-11-27 00:42:27,879 | INFO     | extracted standard info from prmon json
[2025-11-27 01:43:08] 2025-11-27 00:42:27,879 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:43:08] 2025-11-27 00:42:27,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:43:08] 2025-11-27 00:42:27,914 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:43:08] 2025-11-27 00:42:27,916 | INFO     | sum of square deviations: 825593500720.9065
[2025-11-27 01:43:08] 2025-11-27 00:42:28,008 | INFO     | sum of deviations: 2206582603903.09
[2025-11-27 01:43:08] 2025-11-27 00:42:28,008 | INFO     | mean x: 1764161788.6248195
[2025-11-27 01:43:08] 2025-11-27 00:42:28,008 | INFO     | mean y: 2848870.3751803753
[2025-11-27 01:43:08] 2025-11-27 00:42:28,008 | INFO     | intersect: -4712266631.201479
[2025-11-27 01:43:08] 2025-11-27 00:42:28,010 | INFO     | chi2: 15.873620142883563
[2025-11-27 01:43:08] 2025-11-27 00:42:28,012 | INFO     | sum of square deviations: 816691139517.0573
[2025-11-27 01:43:08] 2025-11-27 00:42:28,068 | INFO     | sum of deviations: 2669684206520.3794
[2025-11-27 01:43:08] 2025-11-27 00:42:28,069 | INFO     | mean x: 1764161636.1288922
[2025-11-27 01:43:08] 2025-11-27 00:42:28,069 | INFO     | mean y: 2856801.9753801594
[2025-11-27 01:43:08] 2025-11-27 00:42:28,069 | INFO     | intersect: -5764016658.299364
[2025-11-27 01:43:08] 2025-11-27 00:42:28,070 | INFO     | chi2: 12.57700219375304
[2025-11-27 01:43:08] 2025-11-27 00:42:28,071 | INFO     | current chi2=12.57700219375304 (change=20.76790246620874 %)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,071 | INFO     | right removable region: 1380
[2025-11-27 01:43:08] 2025-11-27 00:42:28,073 | INFO     | sum of square deviations: 816690188527.0573
[2025-11-27 01:43:08] 2025-11-27 00:42:28,128 | INFO     | sum of deviations: 1770521876700.576
[2025-11-27 01:43:08] 2025-11-27 00:42:28,129 | INFO     | mean x: 1764161941.1288922
[2025-11-27 01:43:08] 2025-11-27 00:42:28,129 | INFO     | mean y: 2856335.637219406
[2025-11-27 01:43:08] 2025-11-27 00:42:28,129 | INFO     | intersect: -3821711847.855504
[2025-11-27 01:43:08] 2025-11-27 00:42:28,130 | INFO     | chi2: 13.216851484973803
[2025-11-27 01:43:08] 2025-11-27 00:42:28,131 | INFO     | current chi2=13.216851484973803 (change=16.737005383745675 %)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,131 | INFO     | left removable region: 10
[2025-11-27 01:43:08] 2025-11-27 00:42:28,133 | INFO     | sum of square deviations: 797330321294.0559
[2025-11-27 01:43:08] 2025-11-27 00:42:28,186 | INFO     | sum of deviations: 2237751102653.591
[2025-11-27 01:43:08] 2025-11-27 00:42:28,186 | INFO     | mean x: 1764161910.6335766
[2025-11-27 01:43:08] 2025-11-27 00:42:28,186 | INFO     | mean y: 2867898.704379562
[2025-11-27 01:43:08] 2025-11-27 00:42:28,186 | INFO     | intersect: -4948348874.756085
[2025-11-27 01:43:08] 2025-11-27 00:42:28,188 | INFO     | chi2: 9.009643690149286
[2025-11-27 01:43:08] 2025-11-27 00:42:28,188 | INFO     | current memory leak: 2.81 B/s (using 1370 data points, chi2=9.01)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,190 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,190 | INFO     | ..............................
[2025-11-27 01:43:08] 2025-11-27 00:42:28,190 | INFO     | . Timing measurements:
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . get job = 0 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . initial setup = 2 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . payload setup = 131 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . stage-in = 0 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . payload execution = 84527 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . stage-out = 4 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | . log creation = 1 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,191 | INFO     | ..............................
[2025-11-27 01:43:08] 2025-11-27 00:42:28,311 | INFO     | 
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | job summary report
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | --------------------------------------------------
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | PanDA job id: 6893887712
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | task id: 47523449
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | errors: (none)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | pilot state: finished 
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | transexitcode: 0
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | exeerrorcode: 0
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | exeerrordiag: 
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | exitcode: 0
[2025-11-27 01:43:08] 2025-11-27 00:42:28,312 | INFO     | exitmsg: OK
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | cpuconsumptiontime: 321063 s
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | nevents: 1000
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | neventsw: 0
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | pid: 15644
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | pgrp: 15644
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | corecount: 8
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | event service: False
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284632, 23: 2284632, 84662: 2345309, 84663: 2345308, 84667: 2354486, 84669: 2354542, 84765: 2354788}
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | --------------------------------------------------
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | 
[2025-11-27 01:43:08] 2025-11-27 00:42:28,313 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-27 01:43:08] 2025-11-27 00:42:28,462 | INFO     | time since job start (84898s) is within the limit (172800.0s)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:43:08] 2025-11-27 00:42:28,660 | INFO     | job 6893887712 has completed (purged errors)
[2025-11-27 01:43:08] 2025-11-27 00:42:28,660 | INFO     | overall cleanup function is called
[2025-11-27 01:43:08] 2025-11-27 00:42:29,675 | INFO     | --- collectZombieJob: --- 10, [15644]
[2025-11-27 01:43:08] 2025-11-27 00:42:29,676 | INFO     | zombie collector waiting for pid 15644
[2025-11-27 01:43:08] 2025-11-27 00:42:29,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:43:08] 2025-11-27 00:42:29,676 | INFO     | collected zombie processes
[2025-11-27 01:43:08] 2025-11-27 00:42:29,676 | INFO     | will attempt to kill all subprocesses of pid=15644
[2025-11-27 01:43:08] 2025-11-27 00:42:29,816 | INFO     | process IDs to be killed: [15644] (in reverse order)
[2025-11-27 01:43:08] 2025-11-27 00:42:30,764 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:43:08] 2025-11-27 00:42:30,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:43:08] 2025-11-27 00:42:30,768 | INFO     | did not find any defunct processes belonging to 15644
[2025-11-27 01:43:08] 2025-11-27 00:42:30,770 | INFO     | did not find any defunct processes belonging to 15644
[2025-11-27 01:43:08] 2025-11-27 00:42:30,795 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:43:08] 2025-11-27 00:42:30,796 | INFO     | ready for new job
[2025-11-27 01:43:08] 2025-11-27 00:42:30,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:43:08] 2025-11-27 00:42:30,801 | INFO     | ***************************************
[2025-11-27 01:43:08] 2025-11-27 00:42:30,801 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:43:08] 2025-11-27 00:42:30,801 | INFO     | ***************************************
[2025-11-27 01:43:08] 2025-11-27 00:42:30,801 | INFO     | 
[2025-11-27 01:43:08] 2025-11-27 00:42:30,802 | INFO     | pilot is running in a VM
[2025-11-27 01:43:08] 2025-11-27 00:42:30,802 | INFO     | architecture information:
[2025-11-27 01:43:08] 2025-11-27 00:42:30,803 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:43:08] 2025-11-27 00:42:30,979 | INFO     | cat /etc/os-release:
[2025-11-27 01:43:08] NAME="CentOS Linux"
[2025-11-27 01:43:08] VERSION="7 (Core)"
[2025-11-27 01:43:08] ID="centos"
[2025-11-27 01:43:08] ID_LIKE="rhel fedora"
[2025-11-27 01:43:08] VERSION_ID="7"
[2025-11-27 01:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:43:08] ANSI_COLOR="0;31"
[2025-11-27 01:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:43:08] HOME_URL="https://www.centos.org/"
[2025-11-27 01:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:43:08] 
[2025-11-27 01:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:43:08] 
[2025-11-27 01:43:08] 2025-11-27 00:42:30,979 | INFO     | ***************************************
[2025-11-27 01:43:08] 2025-11-27 00:42:31,482 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-27 01:43:08] 2025-11-27 00:42:31,716 | INFO     | sufficient remaining disk space (495199453184 B)
[2025-11-27 01:43:08] 2025-11-27 00:42:31,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:43:08] 2025-11-27 00:42:31,716 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:43:08] 2025-11-27 00:42:31,717 | INFO     | update_server=False
[2025-11-27 01:43:08] 2025-11-27 00:42:31,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:43:08] 2025-11-27 00:42:31,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:43:08] 2025-11-27 00:42:32,428 | INFO     | all data control threads have been joined
[2025-11-27 01:43:08] 2025-11-27 00:42:32,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:43:08] 2025-11-27 00:42:32,534 | INFO     | aborting loop
[2025-11-27 01:43:08] 2025-11-27 00:42:32,722 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:32,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:32,861 | INFO     | all job control threads have been joined
[2025-11-27 01:43:08] 2025-11-27 00:42:33,204 | INFO     | all payload control threads have been joined
[2025-11-27 01:43:08] 2025-11-27 00:42:33,225 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,254 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:43:08] 2025-11-27 00:42:33,289 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:43:08] 2025-11-27 00:42:33,434 | INFO     | [data] control thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,469 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,539 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,867 | INFO     | [job] control thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:33,996 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:34,042 | INFO     | [job] validate thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:34,155 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:34,167 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:34,210 | INFO     | [payload] control thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:34,331 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:37,287 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:43:08] 2025-11-27 00:42:57,917 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:43:08] 2025-11-27 00:42:58,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974232983360)>', '<ExcThread(monitor, started 139974014457600)>']
[2025-11-27 01:43:08] 2025-11-27 00:43:01,614 | INFO     | PID=6241 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 01:43:08] 2025-11-27 00:43:01,615 | INFO     | .. there are 9 such processes running
[2025-11-27 01:43:08] 2025-11-27 00:43:01,615 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:43:08] 2025-11-27 00:43:01,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:43:08] 2025-11-27 00:43:01,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:43:08] 2025-11-27 00:43:01,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:43:08] 2025-11-27 00:43:01,615 | INFO     | [monitor] control thread has ended
[2025-11-27 01:43:08] 2025-11-27 00:43:03,746 | INFO     | all workflow threads have been joined
[2025-11-27 01:43:08] 2025-11-27 00:43:03,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:43:08] 2025-11-27 00:43:03,747 | INFO     | traces error code: 0
[2025-11-27 01:43:08] 2025-11-27 00:43:03,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:43:08] 2025-11-27 00:43:04,025 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:43:08] 2025-11-27 00:43:04,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:43:08] 2025-11-27 00:43:04,158 [wrapper] pilotpid: 6241
[2025-11-27 01:43:08] 2025-11-27 00:43:04,249 [wrapper] Pilot exit status: 0
[2025-11-27 01:43:08] 2025-11-27 00:43:04,488 [wrapper] pandaids: 6893887712
[2025-11-27 01:43:08] 2025-11-27 00:43:05,576 [wrapper] cleanup supervisor_pilot 18569 6242
[2025-11-27 01:43:08] 2025-11-27 00:43:05,712 [wrapper] Test setup, not cleaning
[2025-11-27 01:43:08] 2025-11-27 00:43:05,824 [wrapper] apfmon messages muted
[2025-11-27 01:43:08] 2025-11-27 00:43:05,887 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:43:08] 2025-11-27 00:43:05,982 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:43:08]  *** Error codes and diagnostics ***
[2025-11-27 01:43:08]     "exeErrorCode": 0,
[2025-11-27 01:43:08]     "exeErrorDiag": "",
[2025-11-27 01:43:08]     "pilotErrorCode": 0,
[2025-11-27 01:43:08]     "pilotErrorDiag": "",
[2025-11-27 01:43:08]  *** Listing of results directory ***
[2025-11-27 01:43:08] total 1328516
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc    576529 Nov 21 00:11 pilot3.tar.gz
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc      5112 Nov 21 00:40 queuedata.json
[2025-11-27 01:43:08] -rwx------. 1 boinc boinc     36292 Nov 21 00:41 runpilot2-wrapper.sh
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc       100 Nov 26 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:43:08] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 02:06 run_atlas
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc       105 Nov 26 02:06 job.xml
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc      6392 Nov 26 02:07 init_data.xml
[2025-11-27 01:43:08] -rw-r--r--. 2 boinc boinc 409996141 Nov 26 02:07 EVNT.47493127._000984.pool.root.1
[2025-11-27 01:43:08] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:07 start_atlas.sh
[2025-11-27 01:43:08] drwxrwx--x. 2 boinc boinc        68 Nov 26 02:07 shared
[2025-11-27 01:43:08] -rw-r--r--. 2 boinc boinc    590105 Nov 26 02:07 input.tar.gz
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:07 boinc_lockfile
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc      2785 Nov 26 02:07 pandaJob.out
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc    991877 Nov 26 02:07 agis_schedconf.cvmfs.json
[2025-11-27 01:43:08] drwx------. 5 boinc boinc      4096 Nov 26 02:07 pilot3
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:15 boinc_task_state.xml
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc 918994287 Nov 27 01:39 HITS.47523449._009840.pool.root.1
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc      1027 Nov 27 01:40 memory_monitor_summary.json
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc   1516240 Nov 27 01:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc   2464615 Nov 27 01:40 log.47523449._009840.job.log.tgz.1
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc        95 Nov 27 01:42 pilot_heartbeat.json
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc      8627 Nov 27 01:42 heartbeat.json
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc      4883 Nov 27 01:43 pilotlog.txt
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc  11285356 Nov 27 01:43 log.47523449._009840.job.log.1
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc       353 Nov 27 01:43 output.list
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc       620 Nov 27 01:43 runtime_log
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc  13772800 Nov 27 01:43 result.tar.gz
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc       662 Nov 27 01:43 WgoMDmFSTg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPgIKDmPLkxPn.diag
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc      8817 Nov 27 01:43 runtime_log.err
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc      8192 Nov 27 01:43 boinc_mmap_file
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc        29 Nov 27 01:43 wrapper_checkpoint.txt
[2025-11-27 01:43:08] -rw-r--r--. 1 boinc boinc     21411 Nov 27 01:43 stderr.txt
[2025-11-27 01:43:08] HITS file was successfully produced:
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc 918994287 Nov 27 01:39 shared/HITS.pool.root.1
[2025-11-27 01:43:08]  *** Contents of shared directory: ***
[2025-11-27 01:43:08] total 1311892
[2025-11-27 01:43:08] -rw-r--r--. 2 boinc boinc 409996141 Nov 26 02:07 ATLAS.root_0
[2025-11-27 01:43:08] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:07 start_atlas.sh
[2025-11-27 01:43:08] -rw-r--r--. 2 boinc boinc    590105 Nov 26 02:07 input.tar.gz
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc 918994287 Nov 27 01:39 HITS.pool.root.1
[2025-11-27 01:43:08] -rw-------. 1 boinc boinc  13772800 Nov 27 01:43 result.tar.gz
01:43:10 (31971): run_atlas exited; CPU time 321629.226999
01:43:10 (31971): called boinc_finish(0)

</stderr_txt>
]]>

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