Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:24:07 (1335093): wrapper (7.7.26015): starting
11:24:07 (1335093): wrapper: running run_atlas (--nthreads 6)
[2025-11-24 11:24:07] Arguments: --nthreads 6
[2025-11-24 11:24:07] Threads: 6
[2025-11-24 11:24:07] Checking for CVMFS
[2025-11-24 11:24:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 11:24:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 11:24:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 11:24:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 11:24:08] 2.13.3.0 900246 1986 72204 153229 2 81 18375248 20971521 916 130560 0 1480913 99.989 69936 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-24 11:24:08] CVMFS is ok
[2025-11-24 11:24:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 11:24:08] Checking for apptainer binary...
[2025-11-24 11:24:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 11:24:08] Running /usr/bin/apptainer --version
[2025-11-24 11:24:08] apptainer version 1.4.4-1.el9
[2025-11-24 11:24:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 11:24:08] testio005
[2025-11-24 11:24:08] apptainer works
[2025-11-24 11:24:08] Set ATHENA_PROC_NUMBER=6
[2025-11-24 11:24:08] Set ATHENA_CORE_NUMBER=6
[2025-11-24 11:24:09] Starting ATLAS job with PandaID=6895329398
[2025-11-24 11:24:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:39:40]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:39:40] 2025-11-24 13:39:07,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:39:40] 2025-11-24 13:39:07,473 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:39:40] 2025-11-24 13:39:07,474 | INFO     | sum of square deviations: 89960386553.42586
[2025-11-24 22:39:40] 2025-11-24 13:39:07,482 | INFO     | sum of deviations: 704499273755.9585
[2025-11-24 22:39:40] 2025-11-24 13:39:07,482 | INFO     | mean x: 1763971250.510574
[2025-11-24 22:39:40] 2025-11-24 13:39:07,483 | INFO     | mean y: 2661810.506042296
[2025-11-24 22:39:40] 2025-11-24 13:39:07,483 | INFO     | intersect: -13811379152.65792
[2025-11-24 22:39:40] 2025-11-24 13:39:07,483 | INFO     | chi2: 8.721034436894518
[2025-11-24 22:39:40] 2025-11-24 13:39:07,484 | INFO     | sum of square deviations: 87937364710.92578
[2025-11-24 22:39:40] 2025-11-24 13:39:07,493 | INFO     | sum of deviations: 889949280985.7012
[2025-11-24 22:39:40] 2025-11-24 13:39:07,493 | INFO     | mean x: 1763971098.0106544
[2025-11-24 22:39:40] 2025-11-24 13:39:07,493 | INFO     | mean y: 2675793.0426179604
[2025-11-24 22:39:40] 2025-11-24 13:39:07,493 | INFO     | intersect: -17849176096.249832
[2025-11-24 22:39:40] 2025-11-24 13:39:07,494 | INFO     | chi2: 6.141243936676054
[2025-11-24 22:39:40] 2025-11-24 13:39:07,494 | INFO     | current chi2=6.141243936676054 (change=29.58124427653452 %)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,495 | INFO     | sum of square deviations: 85944901580.92493
[2025-11-24 22:39:40] 2025-11-24 13:39:07,503 | INFO     | sum of deviations: 1003830850132.4994
[2025-11-24 22:39:40] 2025-11-24 13:39:07,503 | INFO     | mean x: 1763970945.5107362
[2025-11-24 22:39:40] 2025-11-24 13:39:07,503 | INFO     | mean y: 2684484.5
[2025-11-24 22:39:40] 2025-11-24 13:39:07,504 | INFO     | intersect: -20600381215.374813
[2025-11-24 22:39:40] 2025-11-24 13:39:07,504 | INFO     | chi2: 4.6949327870063255
[2025-11-24 22:39:40] 2025-11-24 13:39:07,504 | INFO     | current chi2=4.6949327870063255 (change=23.550784899330086 %)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,504 | INFO     | right removable region: 651
[2025-11-24 22:39:40] 2025-11-24 13:39:07,505 | INFO     | sum of square deviations: 87937360440.92578
[2025-11-24 22:39:40] 2025-11-24 13:39:07,513 | INFO     | sum of deviations: 505732972201.10315
[2025-11-24 22:39:40] 2025-11-24 13:39:07,514 | INFO     | mean x: 1763971403.0106544
[2025-11-24 22:39:40] 2025-11-24 13:39:07,514 | INFO     | mean y: 2676785.2709284625
[2025-11-24 22:39:40] 2025-11-24 13:39:07,514 | INFO     | intersect: -10142027309.203442
[2025-11-24 22:39:40] 2025-11-24 13:39:07,515 | INFO     | chi2: 5.957245387968722
[2025-11-24 22:39:40] 2025-11-24 13:39:07,515 | INFO     | current chi2=5.957245387968722 (change=31.691069091913327 %)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,515 | INFO     | sum of square deviations: 85944893040.92493
[2025-11-24 22:39:40] 2025-11-24 13:39:07,523 | INFO     | sum of deviations: 348808347917.8546
[2025-11-24 22:39:40] 2025-11-24 13:39:07,523 | INFO     | mean x: 1763971555.5107362
[2025-11-24 22:39:40] 2025-11-24 13:39:07,524 | INFO     | mean y: 2688791.949386503
[2025-11-24 22:39:40] 2025-11-24 13:39:07,524 | INFO     | intersect: -7156410280.508618
[2025-11-24 22:39:40] 2025-11-24 13:39:07,524 | INFO     | chi2: 4.355424679004014
[2025-11-24 22:39:40] 2025-11-24 13:39:07,524 | INFO     | current chi2=4.355424679004014 (change=26.888613858340506 %)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,525 | INFO     | sum of square deviations: 83982751790.92427
[2025-11-24 22:39:40] 2025-11-24 13:39:07,533 | INFO     | sum of deviations: 302447126635.9151
[2025-11-24 22:39:40] 2025-11-24 13:39:07,534 | INFO     | mean x: 1763971708.0108192
[2025-11-24 22:39:40] 2025-11-24 13:39:07,534 | INFO     | mean y: 2692386.7264296752
[2025-11-24 22:39:40] 2025-11-24 13:39:07,534 | INFO     | intersect: -6349899820.338808
[2025-11-24 22:39:40] 2025-11-24 13:39:07,535 | INFO     | chi2: 4.183789717177702
[2025-11-24 22:39:40] 2025-11-24 13:39:07,535 | INFO     | current chi2=4.183789717177702 (change=3.940717024764643 %)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,535 | INFO     | left removable region: 30
[2025-11-24 22:39:40] 2025-11-24 13:39:07,535 | INFO     | sum of square deviations: 74259486844.9211
[2025-11-24 22:39:40] 2025-11-24 13:39:07,543 | INFO     | sum of deviations: 551436807584.7521
[2025-11-24 22:39:40] 2025-11-24 13:39:07,543 | INFO     | mean x: 1763971830.0112722
[2025-11-24 22:39:40] 2025-11-24 13:39:07,543 | INFO     | mean y: 2719825.035426731
[2025-11-24 22:39:40] 2025-11-24 13:39:07,543 | INFO     | intersect: -13096199059.796282
[2025-11-24 22:39:40] 2025-11-24 13:39:07,544 | INFO     | chi2: 0.1023831668216138
[2025-11-24 22:39:40] 2025-11-24 13:39:07,544 | INFO     | current memory leak: 7.43 B/s (using 621 data points, chi2=0.10)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,545 | INFO     | could have reported an average CPU frequency of 3299 MHz (25 samples)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,545 | INFO     | ..............................
[2025-11-24 22:39:40] 2025-11-24 13:39:07,545 | INFO     | . Timing measurements:
[2025-11-24 22:39:40] 2025-11-24 13:39:07,545 | INFO     | . get job = 0 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,545 | INFO     | . initial setup = 6 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,545 | INFO     | . payload setup = 6 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,546 | INFO     | . stage-in = 0 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,546 | INFO     | . payload execution = 40372 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,546 | INFO     | . stage-out = 5 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,546 | INFO     | . log creation = 0 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,546 | INFO     | ..............................
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | 
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | job summary report
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | --------------------------------------------------
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | PanDA job id: 6895329398
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | task id: 47556137
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | errors: (none)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:39:40] 2025-11-24 13:39:07,849 | INFO     | pilot state: finished 
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | transexitcode: 0
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | exeerrorcode: 0
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | exeerrordiag: 
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | exitcode: 0
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | exitmsg: OK
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | cpuconsumptiontime: 227052 s
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | nevents: 1000
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | neventsw: 0
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | pid: 1345555
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | pgrp: 1345555
[2025-11-24 22:39:40] 2025-11-24 13:39:07,850 | INFO     | corecount: 6
[2025-11-24 22:39:40] 2025-11-24 13:39:07,851 | INFO     | event service: False
[2025-11-24 22:39:40] 2025-11-24 13:39:07,851 | INFO     | sizes: {0: 2298579, 1: 2298834, 5: 2299096, 12: 2299152, 40382: 2342441, 40387: 2352226, 40388: 2352410, 40468: 2352720}
[2025-11-24 22:39:40] 2025-11-24 13:39:07,851 | INFO     | --------------------------------------------------
[2025-11-24 22:39:40] 2025-11-24 13:39:07,851 | INFO     | 
[2025-11-24 22:39:40] 2025-11-24 13:39:07,851 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-24 22:39:40] 2025-11-24 13:39:07,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,869 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | job 6895329398 has completed (purged errors)
[2025-11-24 22:39:40] 2025-11-24 13:39:07,871 | INFO     | overall cleanup function is called
[2025-11-24 22:39:40] 2025-11-24 13:39:08,889 | INFO     | --- collectZombieJob: --- 10, [1345555]
[2025-11-24 22:39:40] 2025-11-24 13:39:08,889 | INFO     | zombie collector waiting for pid 1345555
[2025-11-24 22:39:40] 2025-11-24 13:39:08,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:39:40] 2025-11-24 13:39:08,889 | INFO     | collected zombie processes
[2025-11-24 22:39:40] 2025-11-24 13:39:08,889 | INFO     | will attempt to kill all subprocesses of pid=1345555
[2025-11-24 22:39:40] 2025-11-24 13:39:08,997 | INFO     | process IDs to be killed: [1345555] (in reverse order)
[2025-11-24 22:39:40] 2025-11-24 13:39:09,044 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:39:40] 2025-11-24 13:39:09,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:39:40] 2025-11-24 13:39:09,047 | INFO     | did not find any defunct processes belonging to 1345555
[2025-11-24 22:39:40] 2025-11-24 13:39:09,051 | INFO     | did not find any defunct processes belonging to 1345555
[2025-11-24 22:39:40] 2025-11-24 13:39:09,052 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:39:40] 2025-11-24 13:39:09,052 | INFO     | ready for new job
[2025-11-24 22:39:40] 2025-11-24 13:39:09,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:39:40] 2025-11-24 13:39:09,055 | INFO     | ***************************************
[2025-11-24 22:39:40] 2025-11-24 13:39:09,055 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:39:40] 2025-11-24 13:39:09,055 | INFO     | ***************************************
[2025-11-24 22:39:40] 2025-11-24 13:39:09,055 | INFO     | 
[2025-11-24 22:39:40] 2025-11-24 13:39:09,056 | INFO     | architecture information:
[2025-11-24 22:39:40] 2025-11-24 13:39:09,057 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:39:40] 2025-11-24 13:39:09,071 | INFO     | cat /etc/os-release:
[2025-11-24 22:39:40] NAME="CentOS Linux"
[2025-11-24 22:39:40] VERSION="7 (Core)"
[2025-11-24 22:39:40] ID="centos"
[2025-11-24 22:39:40] ID_LIKE="rhel fedora"
[2025-11-24 22:39:40] VERSION_ID="7"
[2025-11-24 22:39:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:39:40] ANSI_COLOR="0;31"
[2025-11-24 22:39:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:39:40] HOME_URL="https://www.centos.org/"
[2025-11-24 22:39:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:39:40] 
[2025-11-24 22:39:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:39:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:39:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:39:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:39:40] 
[2025-11-24 22:39:40] 2025-11-24 13:39:09,072 | INFO     | ***************************************
[2025-11-24 22:39:40] 2025-11-24 13:39:09,574 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-24 22:39:40] 2025-11-24 13:39:09,589 | INFO     | sufficient remaining disk space (90758447104 B)
[2025-11-24 22:39:40] 2025-11-24 13:39:09,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:39:40] 2025-11-24 13:39:09,590 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:39:40] 2025-11-24 13:39:09,590 | INFO     | update_server=False
[2025-11-24 22:39:40] 2025-11-24 13:39:09,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:39:40] 2025-11-24 13:39:09,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:39:40] 2025-11-24 13:39:09,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:39:40] 2025-11-24 13:39:09,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:39:40] 2025-11-24 13:39:09,905 | INFO     | all payload control threads have been joined
[2025-11-24 22:39:40] 2025-11-24 13:39:10,227 | INFO     | all data control threads have been joined
[2025-11-24 22:39:40] 2025-11-24 13:39:10,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:39:40] 2025-11-24 13:39:10,394 | INFO     | aborting loop
[2025-11-24 22:39:40] 2025-11-24 13:39:10,409 | INFO     | all job control threads have been joined
[2025-11-24 22:39:40] 2025-11-24 13:39:10,591 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:10,596 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:10,908 | INFO     | [payload] control thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,232 | INFO     | [data] control thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,350 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,399 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,414 | INFO     | [job] control thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,596 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,649 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,658 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,775 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,836 | INFO     | [job] validate thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,880 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:11,992 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:13,596 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:39:40] 2025-11-24 13:39:22,110 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-11-24 22:39:40] 2025-11-24 13:39:30,846 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:39:40] 2025-11-24 13:39:31,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428797880128)>', '<ExcThread(monitor, started 140428158420736)>']
[2025-11-24 22:39:40] 2025-11-24 13:39:36,617 | INFO     | all workflow threads have been joined
[2025-11-24 22:39:40] 2025-11-24 13:39:36,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:39:40] 2025-11-24 13:39:36,617 | INFO     | traces error code: 0
[2025-11-24 22:39:40] 2025-11-24 13:39:36,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:39:40] 2025-11-24 13:39:40,252 | INFO     | PID=1338858 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 22:39:40] 2025-11-24 13:39:40,254 | INFO     | .. there are 2 such processes running
[2025-11-24 22:39:40] 2025-11-24 13:39:40,254 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:39:40] 2025-11-24 13:39:40,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:39:40] 2025-11-24 13:39:40,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:39:40] 2025-11-24 13:39:40,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:39:40] 2025-11-24 13:39:40,255 | INFO     | [monitor] control thread has ended
[2025-11-24 22:39:40] 2025-11-24 13:39:40,364 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:39:40] 2025-11-24 13:39:40,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:39:40] 2025-11-24 13:39:40,369 [wrapper] pilotpid: 1338858
[2025-11-24 22:39:40] 2025-11-24 13:39:40,371 [wrapper] Pilot exit status: 0
[2025-11-24 22:39:40] 2025-11-24 13:39:40,381 [wrapper] pandaids: 6895329398
[2025-11-24 22:39:40] 2025-11-24 13:39:40,407 [wrapper] cleanup supervisor_pilot 1481544 1338859
[2025-11-24 22:39:40] 2025-11-24 13:39:40,410 [wrapper] Test setup, not cleaning
[2025-11-24 22:39:40] 2025-11-24 13:39:40,413 [wrapper] apfmon messages muted
[2025-11-24 22:39:40] 2025-11-24 13:39:40,416 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:39:40] 2025-11-24 13:39:40,419 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:39:40]  *** Error codes and diagnostics ***
[2025-11-24 22:39:40]     "exeErrorCode": 0,
[2025-11-24 22:39:40]     "exeErrorDiag": "",
[2025-11-24 22:39:40]     "pilotErrorCode": 0,
[2025-11-24 22:39:40]     "pilotErrorDiag": "",
[2025-11-24 22:39:40]  *** Listing of results directory ***
[2025-11-24 22:39:40] total 1315312
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc    576529 Nov 22 03:54 pilot3.tar.gz
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc      5112 Nov 22 04:25 queuedata.json
[2025-11-24 22:39:40] -rwx------. 1 boinc boinc     36292 Nov 22 04:26 runpilot2-wrapper.sh
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc       100 Nov 24 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:39:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 11:24 run_atlas
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc       105 Nov 24 11:24 job.xml
[2025-11-24 22:39:40] -rw-r--r--. 2 boinc boinc 409763229 Nov 24 11:24 EVNT.47483658._000116.pool.root.1
[2025-11-24 22:39:40] -rw-r--r--. 2 boinc boinc     15847 Nov 24 11:24 start_atlas.sh
[2025-11-24 22:39:40] drwxrwx--x. 2 boinc boinc        68 Nov 24 11:24 shared
[2025-11-24 22:39:40] -rw-r--r--. 2 boinc boinc    590102 Nov 24 11:24 input.tar.gz
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc         0 Nov 24 11:24 boinc_lockfile
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc      2785 Nov 24 11:24 pandaJob.out
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc    989786 Nov 24 11:24 agis_schedconf.cvmfs.json
[2025-11-24 22:39:40] drwx------. 5 boinc boinc      4096 Nov 24 11:24 pilot3
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc      9372 Nov 24 19:05 init_data.xml
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc       533 Nov 24 22:27 boinc_task_state.xml
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc 918570517 Nov 24 22:37 HITS.47556137._001153.pool.root.1
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc      1033 Nov 24 22:37 memory_monitor_summary.json
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc   1516227 Nov 24 22:37 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc   1693419 Nov 24 22:37 log.47556137._001153.job.log.tgz.1
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc      8576 Nov 24 22:39 heartbeat.json
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc        95 Nov 24 22:39 pilot_heartbeat.json
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc        29 Nov 24 22:39 wrapper_checkpoint.txt
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc      8192 Nov 24 22:39 boinc_mmap_file
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc       822 Nov 24 22:39 pilotlog.txt
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc   5625415 Nov 24 22:39 log.47556137._001153.job.log.1
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc       353 Nov 24 22:39 output.list
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc       620 Nov 24 22:39 runtime_log
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc   7342080 Nov 24 22:39 result.tar.gz
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc      8776 Nov 24 22:39 runtime_log.err
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc       652 Nov 24 22:39 RCMODmrwlg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqfJKDmDbXkEm.diag
[2025-11-24 22:39:40] -rw-r--r--. 1 boinc boinc     20786 Nov 24 22:39 stderr.txt
[2025-11-24 22:39:40] HITS file was successfully produced:
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc 918570517 Nov 24 22:37 shared/HITS.pool.root.1
[2025-11-24 22:39:40]  *** Contents of shared directory: ***
[2025-11-24 22:39:40] total 1304972
[2025-11-24 22:39:40] -rw-r--r--. 2 boinc boinc 409763229 Nov 24 11:24 ATLAS.root_0
[2025-11-24 22:39:40] -rw-r--r--. 2 boinc boinc     15847 Nov 24 11:24 start_atlas.sh
[2025-11-24 22:39:40] -rw-r--r--. 2 boinc boinc    590102 Nov 24 11:24 input.tar.gz
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc 918570517 Nov 24 22:37 HITS.pool.root.1
[2025-11-24 22:39:40] -rw-------. 1 boinc boinc   7342080 Nov 24 22:39 result.tar.gz
22:39:41 (1335093): run_atlas exited; CPU time 227036.361754
22:39:41 (1335093): called boinc_finish(0)

</stderr_txt>
]]>

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