Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:18 (4080076): wrapper (7.7.26015): starting
00:12:18 (4080076): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:12:18] Arguments: --nthreads 8
[2025-11-23 00:12:18] Threads: 8
[2025-11-23 00:12:18] Checking for CVMFS
[2025-11-23 00:12:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:12:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:12:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:12:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:12:19] 2.13.2.0 6529 29011 443528 153197 1 168 20636465 40960000 19436 16776704 0 55614561 99.600 55898540 38564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:12:19] CVMFS is ok
[2025-11-23 00:12:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:12:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:12:19] Further information can be found at the LHC@home message board.
[2025-11-23 00:12:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:12:19] Checking for apptainer binary...
[2025-11-23 00:12:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:12:19] Running /usr/bin/apptainer --version
[2025-11-23 00:12:19] apptainer version 1.4.4-1.el9
[2025-11-23 00:12:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:12:19] c-206-36.aglt2.org
[2025-11-23 00:12:19] apptainer works
[2025-11-23 00:12:19] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:12:19] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:12:19] Starting ATLAS job with PandaID=6895337329
[2025-11-23 00:12:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:44:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:44:07] 2025-11-25 03:43:00,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:44:07] 2025-11-25 03:43:00,586 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:44:07] 2025-11-25 03:43:00,590 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3226.4954999999986
[2025-11-24 22:44:07] 2025-11-25 03:43:00,601 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6895337329/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:44:07] 2025-11-25 03:43:00,602 | INFO     | extracted standard info from prmon json
[2025-11-24 22:44:07] 2025-11-25 03:43:00,602 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:44:07] 2025-11-25 03:43:00,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:44:07] 2025-11-25 03:43:00,635 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:44:07] 2025-11-25 03:43:00,638 | INFO     | sum of square deviations: 6406661971299.376
[2025-11-24 22:44:07] 2025-11-25 03:43:00,772 | INFO     | sum of deviations: 16508519350751.135
[2025-11-24 22:44:07] 2025-11-25 03:43:00,772 | INFO     | mean x: 1763958466.4690232
[2025-11-24 22:44:07] 2025-11-25 03:43:00,773 | INFO     | mean y: 2932783.830539359
[2025-11-24 22:44:07] 2025-11-25 03:43:00,773 | INFO     | intersect: -4542389352.420561
[2025-11-24 22:44:07] 2025-11-25 03:43:00,775 | INFO     | chi2: 9.13568581734116
[2025-11-24 22:44:07] 2025-11-25 03:43:00,777 | INFO     | sum of square deviations: 6371705642814.948
[2025-11-24 22:44:07] 2025-11-25 03:43:00,979 | INFO     | sum of deviations: 17480375657381.004
[2025-11-24 22:44:07] 2025-11-25 03:43:00,979 | INFO     | mean x: 1763958313.9726176
[2025-11-24 22:44:07] 2025-11-25 03:43:00,979 | INFO     | mean y: 2937024.092734575
[2025-11-24 22:44:07] 2025-11-25 03:43:00,980 | INFO     | intersect: -4836372212.826028
[2025-11-24 22:44:07] 2025-11-25 03:43:00,982 | INFO     | chi2: 5.814722869554222
[2025-11-24 22:44:07] 2025-11-25 03:43:00,982 | INFO     | current chi2=5.814722869554222 (change=36.351545074844395 %)
[2025-11-24 22:44:07] 2025-11-25 03:43:00,984 | INFO     | sum of square deviations: 6336876211205.813
[2025-11-24 22:44:07] 2025-11-25 03:43:01,124 | INFO     | sum of deviations: 17666407000197.453
[2025-11-24 22:44:07] 2025-11-25 03:43:01,125 | INFO     | mean x: 1763958161.475128
[2025-11-24 22:44:07] 2025-11-25 03:43:01,125 | INFO     | mean y: 2937838.0804681783
[2025-11-24 22:44:07] 2025-11-25 03:43:01,125 | INFO     | intersect: -4914753745.800072
[2025-11-24 22:44:07] 2025-11-25 03:43:01,127 | INFO     | chi2: 5.535657748457015
[2025-11-24 22:44:07] 2025-11-25 03:43:01,127 | INFO     | current chi2=5.535657748457015 (change=4.799284976389618 %)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,127 | INFO     | right removable region: 2733
[2025-11-24 22:44:07] 2025-11-25 03:43:01,130 | INFO     | sum of square deviations: 6371702346984.955
[2025-11-24 22:44:07] 2025-11-25 03:43:01,275 | INFO     | sum of deviations: 15492250270008.262
[2025-11-24 22:44:07] 2025-11-25 03:43:01,275 | INFO     | mean x: 1763958618.9726176
[2025-11-24 22:44:07] 2025-11-25 03:43:01,275 | INFO     | mean y: 2937216.6568090543
[2025-11-24 22:44:07] 2025-11-25 03:43:01,275 | INFO     | intersect: -4285977566.688839
[2025-11-24 22:44:07] 2025-11-25 03:43:01,278 | INFO     | chi2: 5.770676828514091
[2025-11-24 22:44:07] 2025-11-25 03:43:01,278 | INFO     | current chi2=5.770676828514091 (change=36.83367681537037 %)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,281 | INFO     | sum of square deviations: 6336870621041.809
[2025-11-24 22:44:07] 2025-11-25 03:43:01,346 | INFO     | time since job start (167423s) is within the limit (172800.0s)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,419 | INFO     | sum of deviations: 14895035677905.732
[2025-11-24 22:44:07] 2025-11-25 03:43:01,420 | INFO     | mean x: 1763958771.475128
[2025-11-24 22:44:07] 2025-11-25 03:43:01,420 | INFO     | mean y: 2939830.201901975
[2025-11-24 22:44:07] 2025-11-25 03:43:01,420 | INFO     | intersect: -4143306859.4862647
[2025-11-24 22:44:07] 2025-11-25 03:43:01,422 | INFO     | chi2: 4.468476261081813
[2025-11-24 22:44:07] 2025-11-25 03:43:01,422 | INFO     | current chi2=4.468476261081813 (change=22.56582037305987 %)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,422 | INFO     | left removable region: 20
[2025-11-24 22:44:07] 2025-11-25 03:43:01,425 | INFO     | sum of square deviations: 6191971447695.022
[2025-11-24 22:44:07] 2025-11-25 03:43:01,560 | INFO     | sum of deviations: 15703833695590.764
[2025-11-24 22:44:07] 2025-11-25 03:43:01,560 | INFO     | mean x: 1763958740.980833
[2025-11-24 22:44:07] 2025-11-25 03:43:01,560 | INFO     | mean y: 2946641.456690011
[2025-11-24 22:44:07] 2025-11-25 03:43:01,560 | INFO     | intersect: -4470735924.466382
[2025-11-24 22:44:07] 2025-11-25 03:43:01,562 | INFO     | chi2: 0.7548353725623456
[2025-11-24 22:44:07] 2025-11-25 03:43:01,562 | INFO     | current memory leak: 2.54 B/s (using 2713 data points, chi2=0.75)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | could have reported an average CPU frequency of 3218 MHz (94 samples)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | ..............................
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | . Timing measurements:
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | . get job = 0 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | . initial setup = 3 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | . payload setup = 13 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | . stage-in = 0 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,565 | INFO     | . payload execution = 167370 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,573 | INFO     | . stage-out = 3 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,573 | INFO     | . log creation = 1 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,573 | INFO     | ..............................
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | 
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | job summary report
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | --------------------------------------------------
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | PanDA job id: 6895337329
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | task id: 47556149
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | errors: (none)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:44:07] 2025-11-25 03:43:01,915 | INFO     | pilot state: finished 
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | transexitcode: 0
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | exeerrorcode: 0
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | exeerrordiag: 
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | exitcode: 0
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | exitmsg: OK
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | cpuconsumptiontime: 209556 s
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | nevents: 1000
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | neventsw: 0
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | pid: 4108296
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | pgrp: 4108296
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | corecount: 8
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | event service: False
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | sizes: {0: 2298798, 1: 2298798, 9: 2299088, 11: 2299116, 167387: 2401775, 167392: 2411560, 167393: 2411744, 167404: 2411990}
[2025-11-24 22:44:07] 2025-11-25 03:43:01,916 | INFO     | --------------------------------------------------
[2025-11-24 22:44:07] 2025-11-25 03:43:01,917 | INFO     | 
[2025-11-24 22:44:07] 2025-11-25 03:43:01,917 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-24 22:44:07] 2025-11-25 03:43:01,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:44:07] 2025-11-25 03:43:01,998 | INFO     | job 6895337329 has completed (purged errors)
[2025-11-24 22:44:07] 2025-11-25 03:43:01,998 | INFO     | overall cleanup function is called
[2025-11-24 22:44:07] 2025-11-25 03:43:03,017 | INFO     | --- collectZombieJob: --- 10, [4108296]
[2025-11-24 22:44:07] 2025-11-25 03:43:03,017 | INFO     | zombie collector waiting for pid 4108296
[2025-11-24 22:44:07] 2025-11-25 03:43:03,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:44:07] 2025-11-25 03:43:03,017 | INFO     | collected zombie processes
[2025-11-24 22:44:07] 2025-11-25 03:43:03,017 | INFO     | will attempt to kill all subprocesses of pid=4108296
[2025-11-24 22:44:07] 2025-11-25 03:43:03,311 | INFO     | process IDs to be killed: [4108296] (in reverse order)
[2025-11-24 22:44:07] 2025-11-25 03:43:03,436 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:44:07] 2025-11-25 03:43:03,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:44:07] 2025-11-25 03:43:03,450 | INFO     | did not find any defunct processes belonging to 4108296
[2025-11-24 22:44:07] 2025-11-25 03:43:03,463 | INFO     | did not find any defunct processes belonging to 4108296
[2025-11-24 22:44:07] 2025-11-25 03:43:03,465 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:44:07] 2025-11-25 03:43:03,465 | INFO     | ready for new job
[2025-11-24 22:44:07] 2025-11-25 03:43:03,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:44:07] 2025-11-25 03:43:03,480 | INFO     | ***************************************
[2025-11-24 22:44:07] 2025-11-25 03:43:03,480 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:44:07] 2025-11-25 03:43:03,480 | INFO     | ***************************************
[2025-11-24 22:44:07] 2025-11-25 03:43:03,480 | INFO     | 
[2025-11-24 22:44:07] 2025-11-25 03:43:03,484 | INFO     | architecture information:
[2025-11-24 22:44:07] 2025-11-25 03:43:03,485 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:44:07] 2025-11-25 03:43:03,503 | INFO     | cat /etc/os-release:
[2025-11-24 22:44:07] NAME="CentOS Linux"
[2025-11-24 22:44:07] VERSION="7 (Core)"
[2025-11-24 22:44:07] ID="centos"
[2025-11-24 22:44:07] ID_LIKE="rhel fedora"
[2025-11-24 22:44:07] VERSION_ID="7"
[2025-11-24 22:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:44:07] ANSI_COLOR="0;31"
[2025-11-24 22:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:44:07] HOME_URL="https://www.centos.org/"
[2025-11-24 22:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:44:07] 
[2025-11-24 22:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:44:07] 
[2025-11-24 22:44:07] 2025-11-25 03:43:03,503 | INFO     | ***************************************
[2025-11-24 22:44:07] 2025-11-25 03:43:04,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-24 22:44:07] 2025-11-25 03:43:04,034 | INFO     | sufficient remaining disk space (79275491328 B)
[2025-11-24 22:44:07] 2025-11-25 03:43:04,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:44:07] 2025-11-25 03:43:04,034 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:44:07] 2025-11-25 03:43:04,034 | INFO     | update_server=False
[2025-11-24 22:44:07] 2025-11-25 03:43:04,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:44:07] 2025-11-25 03:43:04,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:44:07] 2025-11-25 03:43:04,060 | INFO     | aborting loop
[2025-11-24 22:44:07] 2025-11-25 03:43:04,135 | INFO     | all data control threads have been joined
[2025-11-24 22:44:07] 2025-11-25 03:43:04,420 | INFO     | all payload control threads have been joined
[2025-11-24 22:44:07] 2025-11-25 03:43:05,041 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,065 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,133 | INFO     | [job] validate thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,141 | INFO     | [data] control thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,207 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,352 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,425 | INFO     | [payload] control thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,434 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:44:07] 2025-11-25 03:43:05,553 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,556 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:05,793 | INFO     | all job control threads have been joined
[2025-11-24 22:44:07] 2025-11-25 03:43:06,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:06,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:44:07] 2025-11-25 03:43:06,371 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:06,803 | INFO     | [job] control thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:06,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:44:07] 2025-11-25 03:43:07,472 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:07,811 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:10,326 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:44:07] 2025-11-25 03:43:14,715 [wrapper] supervise_pilot (15 min periods counter: 187)
[2025-11-24 22:44:07] 2025-11-25 03:43:35,114 | INFO     | PID=4086534 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 22:44:07] 2025-11-25 03:43:35,114 | INFO     | .. there are 19 such processes running
[2025-11-24 22:44:07] 2025-11-25 03:43:35,114 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:44:07] 2025-11-25 03:43:35,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:44:07] 2025-11-25 03:43:35,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:44:07] 2025-11-25 03:43:59,558 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:44:07] 2025-11-25 03:44:01,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384000014144)>', '<ExcThread(monitor, started 140383656851200)>']
[2025-11-24 22:44:07] 2025-11-25 03:44:02,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:44:07] 2025-11-25 03:44:02,342 | INFO     | [monitor] control thread has ended
[2025-11-24 22:44:07] 2025-11-25 03:44:06,690 | INFO     | all workflow threads have been joined
[2025-11-24 22:44:07] 2025-11-25 03:44:06,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:44:07] 2025-11-25 03:44:06,690 | INFO     | traces error code: 0
[2025-11-24 22:44:07] 2025-11-25 03:44:06,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:44:07] 2025-11-25 03:44:06,991 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:44:07] 2025-11-25 03:44:06,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:44:07] 2025-11-25 03:44:07,007 [wrapper] pilotpid: 4086534
[2025-11-24 22:44:07] 2025-11-25 03:44:07,033 [wrapper] Pilot exit status: 0
[2025-11-24 22:44:07] 2025-11-25 03:44:07,113 [wrapper] pandaids: 6895337329
[2025-11-24 22:44:07] 2025-11-25 03:44:07,195 [wrapper] cleanup supervisor_pilot 2489278 4086535
[2025-11-24 22:44:07] 2025-11-25 03:44:07,211 [wrapper] Test setup, not cleaning
[2025-11-24 22:44:07] 2025-11-25 03:44:07,217 [wrapper] apfmon messages muted
[2025-11-24 22:44:07] 2025-11-25 03:44:07,221 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:44:07] 2025-11-25 03:44:07,224 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:44:07]  *** Error codes and diagnostics ***
[2025-11-24 22:44:07]     "exeErrorCode": 0,
[2025-11-24 22:44:07]     "exeErrorDiag": "",
[2025-11-24 22:44:07]     "pilotErrorCode": 0,
[2025-11-24 22:44:07]     "pilotErrorDiag": "",
[2025-11-24 22:44:07]  *** Listing of results directory ***
[2025-11-24 22:44:07] total 1354208
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 01:31 pilot3.tar.gz
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 01:55 queuedata.json
[2025-11-24 22:44:07] -rwx------. 1 boincer umatlas     36292 Nov 22 01:55 runpilot2-wrapper.sh
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:44:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:12 run_atlas
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:12 job.xml
[2025-11-24 22:44:07] -rw-r--r--. 2 boincer umatlas 411515897 Nov 23 00:12 EVNT.47483658._001074.pool.root.1
[2025-11-24 22:44:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:12 start_atlas.sh
[2025-11-24 22:44:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:12 shared
[2025-11-24 22:44:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 00:12 input.tar.gz
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:12 boinc_lockfile
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas      2781 Nov 23 00:12 pandaJob.out
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas        57 Nov 23 00:12 setup.sh.local
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas    989784 Nov 23 00:12 agis_schedconf.cvmfs.json
[2025-11-24 22:44:07] drwx------. 5 boincer umatlas      4096 Nov 23 00:12 pilot3
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas       533 Nov 24 22:27 boinc_task_state.xml
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas      6902 Nov 24 22:39 init_data.xml
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas 923407797 Nov 24 22:42 HITS.47556149._000601.pool.root.1
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas      1061 Nov 24 22:42 memory_monitor_summary.json
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas        95 Nov 24 22:42 pilot_heartbeat.json
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas   1516227 Nov 24 22:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas   3335798 Nov 24 22:42 log.47556149._000601.job.log.tgz.1
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas      8618 Nov 24 22:43 heartbeat.json
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 22:44 boinc_mmap_file
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas        29 Nov 24 22:44 wrapper_checkpoint.txt
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas      4824 Nov 24 22:44 pilotlog.txt
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas  20596794 Nov 24 22:44 log.47556149._000601.job.log.1
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas       353 Nov 24 22:44 output.list
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas       620 Nov 24 22:44 runtime_log
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas  23951360 Nov 24 22:44 result.tar.gz
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 22:44 runtime_log.err
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas       669 Nov 24 22:44 EocKDmViwg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms1JKDmZjJBWm.diag
[2025-11-24 22:44:07] -rw-r--r--. 1 boincer umatlas     21263 Nov 24 22:44 stderr.txt
[2025-11-24 22:44:07] HITS file was successfully produced:
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas 923407797 Nov 24 22:42 shared/HITS.pool.root.1
[2025-11-24 22:44:07]  *** Contents of shared directory: ***
[2025-11-24 22:44:07] total 1327636
[2025-11-24 22:44:07] -rw-r--r--. 2 boincer umatlas 411515897 Nov 23 00:12 ATLAS.root_0
[2025-11-24 22:44:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:12 start_atlas.sh
[2025-11-24 22:44:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 00:12 input.tar.gz
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas 923407797 Nov 24 22:42 HITS.pool.root.1
[2025-11-24 22:44:07] -rw-------. 1 boincer umatlas  23951360 Nov 24 22:44 result.tar.gz
22:44:08 (4080076): run_atlas exited; CPU time 210452.401497
22:44:08 (4080076): called boinc_finish(0)

</stderr_txt>
]]>

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