Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:50 (1929714): wrapper (7.7.26015): starting
00:09:50 (1929714): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:09:50] Arguments: --nthreads 12
[2025-11-23 00:09:50] Threads: 12
[2025-11-23 00:09:50] Checking for CVMFS
[2025-11-23 00:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:09:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:09:52] 2.13.2.0 8902 31084 284172 153197 1 199 29981256 40960001 23852 16776704 0 55070285 99.612 55421933 34788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:09:52] CVMFS is ok
[2025-11-23 00:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:09:52] Further information can be found at the LHC@home message board.
[2025-11-23 00:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:09:52] Checking for apptainer binary...
[2025-11-23 00:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:09:52] Running /usr/bin/apptainer --version
[2025-11-23 00:09:52] apptainer version 1.4.4-1.el9
[2025-11-23 00:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:09:53] c-211-35-2.aglt2.org
[2025-11-23 00:09:53] apptainer works
[2025-11-23 00:09:53] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:09:53] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:09:53] Starting ATLAS job with PandaID=6895329927
[2025-11-23 00:09:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:00:50]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:00:50] 2025-11-24 03:30:54,211 | INFO     | monitor loop #4351: job 0:6895329927 is in state 'finished'
[2025-11-24 00:00:50] 2025-11-24 03:30:54,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:50] 2025-11-24 03:30:54,299 | INFO     | time since job start (80374s) is within the limit (172800.0s)
[2025-11-24 00:00:50] 2025-11-24 03:30:56,306 | INFO     | time since job start (80376s) is within the limit (172800.0s)
[2025-11-24 00:00:50] 2025-11-24 03:30:56,716 | INFO     | monitor loop #4352: job 0:6895329927 is in state 'finished'
[2025-11-24 00:00:50] 2025-11-24 03:30:56,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:50] 2025-11-24 03:30:58,312 | INFO     | time since job start (80378s) is within the limit (172800.0s)
[2025-11-24 00:00:50] 2025-11-24 03:30:59,222 | INFO     | monitor loop #4353: job 0:6895329927 is in state 'finished'
[2025-11-24 00:00:50] 2025-11-24 03:30:59,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:50] 2025-11-24 03:31:00,319 | INFO     | time since job start (80380s) is within the limit (172800.0s)
[2025-11-24 00:00:50] 2025-11-24 03:31:01,727 | INFO     | monitor loop #4354: job 0:6895329927 is in state 'finished'
[2025-11-24 00:00:50] 2025-11-24 03:31:01,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:50] 2025-11-24 03:31:02,326 | INFO     | time since job start (80382s) is within the limit (172800.0s)
[2025-11-24 00:00:50] 2025-11-24 03:31:02,903 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 00:00:50] 2025-11-24 03:31:02,923 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2644.121385416666
[2025-11-24 00:00:50] 2025-11-24 03:31:03,024 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6895329927/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:00:50] 2025-11-24 03:31:03,025 | INFO     | extracted standard info from prmon json
[2025-11-24 00:00:50] 2025-11-24 03:31:03,025 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:00:50] 2025-11-24 03:31:03,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:00:50] 2025-11-24 03:31:03,187 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:00:50] 2025-11-24 03:31:03,189 | INFO     | sum of square deviations: 705136215378.4866
[2025-11-24 00:00:50] 2025-11-24 03:31:03,495 | INFO     | sum of deviations: 3726115108600.008
[2025-11-24 00:00:50] 2025-11-24 03:31:03,496 | INFO     | mean x: 1763914928.2623575
[2025-11-24 00:00:50] 2025-11-24 03:31:03,496 | INFO     | mean y: 3431665.660836502
[2025-11-24 00:00:50] 2025-11-24 03:31:03,496 | INFO     | intersect: -9317533448.79667
[2025-11-24 00:00:50] 2025-11-24 03:31:03,518 | INFO     | chi2: 27.716887848401612
[2025-11-24 00:00:50] 2025-11-24 03:31:03,520 | INFO     | sum of square deviations: 697125812816.9966
[2025-11-24 00:00:50] 2025-11-24 03:31:03,970 | INFO     | sum of deviations: 4277422889820.7812
[2025-11-24 00:00:50] 2025-11-24 03:31:04,055 | INFO     | mean x: 1763914775.7824428
[2025-11-24 00:00:50] 2025-11-24 03:31:04,055 | INFO     | mean y: 3442158.5641221376
[2025-11-24 00:00:50] 2025-11-24 03:31:04,055 | INFO     | intersect: -10819581890.906218
[2025-11-24 00:00:50] 2025-11-24 03:31:04,057 | INFO     | chi2: 24.152194828819837
[2025-11-24 00:00:50] 2025-11-24 03:31:04,057 | INFO     | current chi2=24.152194828819837 (change=12.861086854624427 %)
[2025-11-24 00:00:50] 2025-11-24 03:31:04,057 | INFO     | right removable region: 1309
[2025-11-24 00:00:50] 2025-11-24 03:31:04,144 | INFO     | sum of square deviations: 697121671597.5605
[2025-11-24 00:00:50] 2025-11-24 03:31:04,437 | INFO     | monitor loop #4355: job 0:6895329927 is in state 'finished'
[2025-11-24 00:00:50] 2025-11-24 03:31:04,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:50] 2025-11-24 03:31:04,563 | INFO     | sum of deviations: 3071694267384.732
[2025-11-24 00:00:50] 2025-11-24 03:31:04,563 | INFO     | mean x: 1763915080.7816794
[2025-11-24 00:00:50] 2025-11-24 03:31:04,563 | INFO     | mean y: 3444118.397709924
[2025-11-24 00:00:50] 2025-11-24 03:31:04,633 | INFO     | intersect: -7768811518.661904
[2025-11-24 00:00:50] 2025-11-24 03:31:04,635 | INFO     | chi2: 23.17744491950054
[2025-11-24 00:00:50] 2025-11-24 03:31:04,636 | INFO     | current chi2=23.17744491950054 (change=16.37789550446535 %)
[2025-11-24 00:00:50] 2025-11-24 03:31:04,636 | INFO     | left removable region: 10
[2025-11-24 00:00:50] 2025-11-24 03:31:04,724 | INFO     | sum of square deviations: 679708795487.2565
[2025-11-24 00:00:50] 2025-11-24 03:31:05,420 | INFO     | sum of deviations: 3147346638761.0684
[2025-11-24 00:00:50] 2025-11-24 03:31:05,421 | INFO     | mean x: 1763915050.3256352
[2025-11-24 00:00:50] 2025-11-24 03:31:05,421 | INFO     | mean y: 3467982.040030793
[2025-11-24 00:00:50] 2025-11-24 03:31:05,421 | INFO     | intersect: -8164224037.779557
[2025-11-24 00:00:50] 2025-11-24 03:31:05,423 | INFO     | chi2: 15.429202186718017
[2025-11-24 00:00:50] 2025-11-24 03:31:05,423 | INFO     | current memory leak: 4.63 B/s (using 1299 data points, chi2=15.43)
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | could have reported an average CPU frequency of 2623 MHz (47 samples)
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | ..............................
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | . Timing measurements:
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | . get job = 0 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | . initial setup = 7 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | . payload setup = 52 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | . stage-in = 0 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,446 | INFO     | . payload execution = 80194 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,447 | INFO     | . stage-out = 21 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,447 | INFO     | . log creation = 8 s
[2025-11-24 00:00:50] 2025-11-24 03:31:05,447 | INFO     | ..............................
[2025-11-24 00:00:50] 2025-11-24 03:31:06,467 | INFO     | 
[2025-11-24 00:00:50] 2025-11-24 03:31:06,467 | INFO     | job summary report
[2025-11-24 00:00:50] 2025-11-24 03:31:06,467 | INFO     | --------------------------------------------------
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | PanDA job id: 6895329927
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | task id: 47556149
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | errors: (none)
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | pilot state: finished 
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | transexitcode: 0
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | exeerrorcode: 0
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | exeerrordiag: 
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | exitcode: 0
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | exitmsg: OK
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | cpuconsumptiontime: 265612 s
[2025-11-24 00:00:50] 2025-11-24 03:31:06,468 | INFO     | nevents: 1000
[2025-11-24 00:00:50] 2025-11-24 03:31:06,476 | INFO     | neventsw: 0
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | pid: 1954610
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | pgrp: 1954610
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | corecount: 12
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | event service: False
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | sizes: {0: 2297976, 1: 2298661, 2: 2298661, 3: 2298888, 15: 2298888, 26: 2298916, 38: 2299362, 50: 2299362, 80250: 2360028, 80251: 2360027, 80274: 2369077, 80275: 
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | --------------------------------------------------
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | 
[2025-11-24 00:00:50] 2025-11-24 03:31:06,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-24 00:00:50] 2025-11-24 03:31:06,621 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,622 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:00:50] 2025-11-24 03:31:06,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,623 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:00:50] 2025-11-24 03:31:06,623 | INFO     | job 6895329927 has completed (purged errors)
[2025-11-24 00:00:50] 2025-11-24 03:31:06,623 | INFO     | overall cleanup function is called
[2025-11-24 00:00:50] 2025-11-24 03:31:07,871 | INFO     | --- collectZombieJob: --- 10, [1954610]
[2025-11-24 00:00:50] 2025-11-24 03:31:07,872 | INFO     | zombie collector waiting for pid 1954610
[2025-11-24 00:00:50] 2025-11-24 03:31:07,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:00:50] 2025-11-24 03:31:07,872 | INFO     | collected zombie processes
[2025-11-24 00:00:50] 2025-11-24 03:31:07,872 | INFO     | will attempt to kill all subprocesses of pid=1954610
[2025-11-24 00:00:50] 2025-11-24 03:31:08,471 | INFO     | PID=1938950 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:00:50] 2025-11-24 03:31:08,471 | INFO     | .. there are 26 such processes running
[2025-11-24 00:00:50] 2025-11-24 03:31:09,256 | INFO     | process IDs to be killed: [1954610] (in reverse order)
[2025-11-24 00:00:50] 2025-11-24 03:31:09,619 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:00:50] 2025-11-24 03:31:09,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:00:50] 2025-11-24 03:31:09,655 | INFO     | did not find any defunct processes belonging to 1954610
[2025-11-24 00:00:50] 2025-11-24 03:31:09,689 | INFO     | did not find any defunct processes belonging to 1954610
[2025-11-24 00:00:50] 2025-11-24 03:31:09,705 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:00:50] 2025-11-24 03:31:09,706 | INFO     | ready for new job
[2025-11-24 00:00:50] 2025-11-24 03:31:09,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:00:50] 2025-11-24 03:31:09,729 | INFO     | ***************************************
[2025-11-24 00:00:50] 2025-11-24 03:31:09,729 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:00:50] 2025-11-24 03:31:09,729 | INFO     | ***************************************
[2025-11-24 00:00:50] 2025-11-24 03:31:09,730 | INFO     | 
[2025-11-24 00:00:50] 2025-11-24 03:31:09,776 | INFO     | architecture information:
[2025-11-24 00:00:50] 2025-11-24 03:31:09,783 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:00:50] 2025-11-24 03:31:09,883 | INFO     | cat /etc/os-release:
[2025-11-24 00:00:50] NAME="CentOS Linux"
[2025-11-24 00:00:50] VERSION="7 (Core)"
[2025-11-24 00:00:50] ID="centos"
[2025-11-24 00:00:50] ID_LIKE="rhel fedora"
[2025-11-24 00:00:50] VERSION_ID="7"
[2025-11-24 00:00:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:00:50] ANSI_COLOR="0;31"
[2025-11-24 00:00:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:00:50] HOME_URL="https://www.centos.org/"
[2025-11-24 00:00:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:00:50] 
[2025-11-24 00:00:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:00:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:00:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:00:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:00:50] 
[2025-11-24 00:00:50] 2025-11-24 03:31:09,883 | INFO     | ***************************************
[2025-11-24 00:00:50] 2025-11-24 03:31:10,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-24 00:00:50] 2025-11-24 03:31:10,446 | INFO     | sufficient remaining disk space (116536639488 B)
[2025-11-24 00:00:50] 2025-11-24 03:31:10,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:00:50] 2025-11-24 03:31:10,446 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:00:50] 2025-11-24 03:31:10,446 | INFO     | update_server=False
[2025-11-24 00:00:50] 2025-11-24 03:31:10,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:00:50] 2025-11-24 03:31:10,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:00:50] 2025-11-24 03:31:10,588 | INFO     | aborting loop
[2025-11-24 00:00:50] 2025-11-24 03:31:10,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:00:50] 2025-11-24 03:31:10,818 | INFO     | all job control threads have been joined
[2025-11-24 00:00:50] 2025-11-24 03:31:11,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:00:50] 2025-11-24 03:31:11,086 | INFO     | all payload control threads have been joined
[2025-11-24 00:00:50] 2025-11-24 03:31:11,238 | INFO     | all data control threads have been joined
[2025-11-24 00:00:50] 2025-11-24 03:31:11,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:00:50] 2025-11-24 03:31:11,461 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:11,555 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:11,597 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:11,597 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:11,604 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:11,783 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:11,831 | INFO     | [job] control thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,033 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,074 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,075 | INFO     | [job] validate thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,080 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,096 | INFO     | [payload] control thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,253 | INFO     | [data] control thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:12,738 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:15,279 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:00:50] 2025-11-24 03:31:46,061 | INFO     | PID=1938950 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:00:50] 2025-11-24 03:31:46,061 | INFO     | .. there are 26 such processes running
[2025-11-24 00:00:50] 2025-11-24 03:31:46,061 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:00:50] 2025-11-24 03:31:46,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:00:50] 2025-11-24 03:31:46,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:00:50] 2025-11-24 03:31:50,278 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:00:50] 2025-11-24 03:31:51,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666955593536)>', '<ExcThread(monitor, started 140666453604096)>']
[2025-11-24 00:00:50] 2025-11-24 03:31:52,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:00:50] 2025-11-24 03:31:52,151 | INFO     | [monitor] control thread has ended
[2025-11-24 00:00:50] 2025-11-24 03:31:56,779 | INFO     | all workflow threads have been joined
[2025-11-24 00:00:50] 2025-11-24 03:31:56,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:00:50] 2025-11-24 03:31:56,780 | INFO     | traces error code: 0
[2025-11-24 00:00:50] 2025-11-24 03:31:56,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:00:50] 2025-11-24 03:31:58,698 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:00:50] 2025-11-24 03:31:58,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:00:50] 2025-11-24 03:31:58,739 [wrapper] pilotpid: 1938950
[2025-11-24 00:00:50] 2025-11-24 03:31:58,775 [wrapper] Pilot exit status: 0
[2025-11-24 00:00:50] 2025-11-24 03:31:58,877 [wrapper] pandaids: 6895329927
[2025-11-24 00:00:50] 2025-11-24 03:31:59,257 [wrapper] cleanup supervisor_pilot  659194 1938951
[2025-11-24 00:00:50] 2025-11-24 03:31:59,269 [wrapper] Test setup, not cleaning
[2025-11-24 00:00:50] 2025-11-24 03:31:59,272 [wrapper] apfmon messages muted
[2025-11-24 00:00:50] 2025-11-24 03:31:59,275 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:00:50] 2025-11-24 03:31:59,278 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:00:50]  *** Error codes and diagnostics ***
[2025-11-24 00:00:50]     "exeErrorCode": 0,
[2025-11-24 00:00:50]     "exeErrorDiag": "",
[2025-11-24 00:00:50]     "pilotErrorCode": 0,
[2025-11-24 00:00:50]     "pilotErrorDiag": "",
[2025-11-24 00:00:50]  *** Listing of results directory ***
[2025-11-24 00:00:50] total 1318300
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 14:48 pilot3.tar.gz
[2025-11-24 00:00:50] -rwx------. 1 boincer umatlas     36292 Nov 21 15:02 runpilot2-wrapper.sh
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 15:02 queuedata.json
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:00:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:09 run_atlas
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:09 job.xml
[2025-11-24 00:00:50] -rw-r--r--. 2 boincer umatlas 410265879 Nov 23 00:09 EVNT.47483658._001039.pool.root.1
[2025-11-24 00:00:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:09 start_atlas.sh
[2025-11-24 00:00:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:09 shared
[2025-11-24 00:00:50] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 00:09 input.tar.gz
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:09 boinc_lockfile
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:09 pandaJob.out
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas        57 Nov 23 00:09 setup.sh.local
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas    989784 Nov 23 00:11 agis_schedconf.cvmfs.json
[2025-11-24 00:00:50] drwx------. 5 boincer umatlas      4096 Nov 23 00:11 pilot3
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas       531 Nov 23 21:54 boinc_task_state.xml
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas 911187121 Nov 23 22:29 HITS.47556149._000257.pool.root.1
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas      1073 Nov 23 22:30 memory_monitor_summary.json
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas   1526164 Nov 23 22:30 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas   2766140 Nov 23 22:30 log.47556149._000257.job.log.tgz.1
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas        95 Nov 23 22:30 pilot_heartbeat.json
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas      8653 Nov 23 22:31 heartbeat.json
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas      4825 Nov 23 22:31 pilotlog.txt
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas   9513024 Nov 23 22:31 log.47556149._000257.job.log.1
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas       353 Nov 23 22:31 output.list
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas       620 Nov 23 22:31 runtime_log
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas  12298240 Nov 23 22:31 result.tar.gz
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas      9355 Nov 23 22:31 runtime_log.err
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas       667 Nov 23 22:31 OdcKDmhVmg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdnHKDmjIYSPn.diag
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas      6879 Nov 24 00:00 init_data.xml
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 00:00 boinc_mmap_file
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas        28 Nov 24 00:00 wrapper_checkpoint.txt
[2025-11-24 00:00:50] -rw-r--r--. 1 boincer umatlas     21903 Nov 24 00:00 stderr.txt
[2025-11-24 00:00:50] HITS file was successfully produced:
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas 911187121 Nov 23 22:29 shared/HITS.pool.root.1
[2025-11-24 00:00:50]  *** Contents of shared directory: ***
[2025-11-24 00:00:50] total 1303100
[2025-11-24 00:00:50] -rw-r--r--. 2 boincer umatlas 410265879 Nov 23 00:09 ATLAS.root_0
[2025-11-24 00:00:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:09 start_atlas.sh
[2025-11-24 00:00:50] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 00:09 input.tar.gz
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas 911187121 Nov 23 22:29 HITS.pool.root.1
[2025-11-24 00:00:50] -rw-------. 1 boincer umatlas  12298240 Nov 23 22:31 result.tar.gz
00:00:52 (1929714): run_atlas exited; CPU time 267695.441374
00:00:52 (1929714): called boinc_finish(0)

</stderr_txt>
]]>

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