Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:08 (1932477): wrapper (7.7.26015): starting
00:10:08 (1932477): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:10:08] Arguments: --nthreads 12
[2025-11-23 00:10:08] Threads: 12
[2025-11-23 00:10:08] Checking for CVMFS
[2025-11-23 00:10:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:10:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:10:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:10:10] 2.13.2.0 8902 31084 284172 153197 0 199 29981256 40960001 23901 16776704 0 55072931 99.612 55421933 34788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:10:10] CVMFS is ok
[2025-11-23 00:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:10:10] Further information can be found at the LHC@home message board.
[2025-11-23 00:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:10:10] Checking for apptainer binary...
[2025-11-23 00:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:10:10] Running /usr/bin/apptainer --version
[2025-11-23 00:10:10] apptainer version 1.4.4-1.el9
[2025-11-23 00:10:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:10:11] c-211-35-2.aglt2.org
[2025-11-23 00:10:11] apptainer works
[2025-11-23 00:10:11] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:10:11] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:10:11] Starting ATLAS job with PandaID=6894289741
[2025-11-23 00:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:00:48]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:00:48] 2025-11-24 03:40:27,750 | INFO     | time since job start (80942s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:29,004 | INFO     | monitor loop #4397: job 0:6894289741 is in state 'finished'
[2025-11-24 00:00:48] 2025-11-24 03:40:29,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:48] 2025-11-24 03:40:29,763 | INFO     | time since job start (80944s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:31,509 | INFO     | monitor loop #4398: job 0:6894289741 is in state 'finished'
[2025-11-24 00:00:48] 2025-11-24 03:40:31,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:48] 2025-11-24 03:40:31,780 | INFO     | time since job start (80946s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:33,788 | INFO     | time since job start (80948s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:34,014 | INFO     | monitor loop #4399: job 0:6894289741 is in state 'finished'
[2025-11-24 00:00:48] 2025-11-24 03:40:34,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:48] 2025-11-24 03:40:35,795 | INFO     | time since job start (80950s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:36,536 | INFO     | monitor loop #4400: job 0:6894289741 is in state 'finished'
[2025-11-24 00:00:48] 2025-11-24 03:40:36,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:48] 2025-11-24 03:40:37,802 | INFO     | time since job start (80952s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:37,980 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 00:00:48] 2025-11-24 03:40:37,993 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2639.4927291666663
[2025-11-24 00:00:48] 2025-11-24 03:40:38,011 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6894289741/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:00:48] 2025-11-24 03:40:38,035 | INFO     | extracted standard info from prmon json
[2025-11-24 00:00:48] 2025-11-24 03:40:38,035 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:00:48] 2025-11-24 03:40:38,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:00:48] 2025-11-24 03:40:38,184 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:00:48] 2025-11-24 03:40:38,186 | INFO     | sum of square deviations: 719704888273.9576
[2025-11-24 00:00:48] 2025-11-24 03:40:38,399 | INFO     | sum of deviations: 5576953239169.03
[2025-11-24 00:00:48] 2025-11-24 03:40:38,400 | INFO     | mean x: 1763915197.960725
[2025-11-24 00:00:48] 2025-11-24 03:40:38,400 | INFO     | mean y: 3456151.0581571
[2025-11-24 00:00:48] 2025-11-24 03:40:38,400 | INFO     | intersect: -13665024829.359976
[2025-11-24 00:00:48] 2025-11-24 03:40:38,423 | INFO     | chi2: 21.274255335464265
[2025-11-24 00:00:48] 2025-11-24 03:40:38,424 | INFO     | sum of square deviations: 711584317719.2958
[2025-11-24 00:00:48] 2025-11-24 03:40:38,794 | INFO     | sum of deviations: 6122712447424.567
[2025-11-24 00:00:48] 2025-11-24 03:40:38,795 | INFO     | mean x: 1763915045.4814253
[2025-11-24 00:00:48] 2025-11-24 03:40:38,795 | INFO     | mean y: 3466397.2274450343
[2025-11-24 00:00:48] 2025-11-24 03:40:38,795 | INFO     | intersect: -15173856003.276794
[2025-11-24 00:00:48] 2025-11-24 03:40:38,841 | INFO     | chi2: 17.95028027269307
[2025-11-24 00:00:48] 2025-11-24 03:40:38,841 | INFO     | current chi2=17.95028027269307 (change=15.62440146720489 %)
[2025-11-24 00:00:48] 2025-11-24 03:40:38,841 | INFO     | right removable region: 1318
[2025-11-24 00:00:48] 2025-11-24 03:40:38,843 | INFO     | sum of square deviations: 711579907419.2954
[2025-11-24 00:00:48] 2025-11-24 03:40:39,160 | INFO     | sum of deviations: 4911529466272.948
[2025-11-24 00:00:48] 2025-11-24 03:40:39,160 | INFO     | mean x: 1763915350.4814253
[2025-11-24 00:00:48] 2025-11-24 03:40:39,160 | INFO     | mean y: 3468641.2630780893
[2025-11-24 00:00:48] 2025-11-24 03:40:39,160 | INFO     | intersect: -12171583140.793146
[2025-11-24 00:00:48] 2025-11-24 03:40:39,180 | INFO     | chi2: 16.665798932654802
[2025-11-24 00:00:48] 2025-11-24 03:40:39,181 | INFO     | current chi2=16.665798932654802 (change=21.662127910663685 %)
[2025-11-24 00:00:48] 2025-11-24 03:40:39,181 | INFO     | left removable region: 10
[2025-11-24 00:00:48] 2025-11-24 03:40:39,182 | INFO     | sum of square deviations: 693925866403.0117
[2025-11-24 00:00:48] 2025-11-24 03:40:39,207 | INFO     | monitor loop #4401: job 0:6894289741 is in state 'finished'
[2025-11-24 00:00:48] 2025-11-24 03:40:39,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:00:48] 2025-11-24 03:40:39,401 | INFO     | sum of deviations: 4968848752093.667
[2025-11-24 00:00:48] 2025-11-24 03:40:39,401 | INFO     | mean x: 1763915320.027523
[2025-11-24 00:00:48] 2025-11-24 03:40:39,401 | INFO     | mean y: 3492265.898318043
[2025-11-24 00:00:48] 2025-11-24 03:40:39,401 | INFO     | intersect: -12627004536.518644
[2025-11-24 00:00:48] 2025-11-24 03:40:39,403 | INFO     | chi2: 9.146316118689617
[2025-11-24 00:00:48] 2025-11-24 03:40:39,403 | INFO     | current memory leak: 7.16 B/s (using 1308 data points, chi2=9.15)
[2025-11-24 00:00:48] 2025-11-24 03:40:39,423 | INFO     | could have reported an average CPU frequency of 2621 MHz (47 samples)
[2025-11-24 00:00:48] 2025-11-24 03:40:39,423 | INFO     | ..............................
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . Timing measurements:
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . get job = 0 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . initial setup = 6 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . payload setup = 56 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . stage-in = 0 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . payload execution = 80773 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . stage-out = 17 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | . log creation = 6 s
[2025-11-24 00:00:48] 2025-11-24 03:40:39,424 | INFO     | ..............................
[2025-11-24 00:00:48] 2025-11-24 03:40:39,877 | INFO     | time since job start (80954s) is within the limit (172800.0s)
[2025-11-24 00:00:48] 2025-11-24 03:40:40,328 | INFO     | 
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | job summary report
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | --------------------------------------------------
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | PanDA job id: 6894289741
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | task id: 47533967
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | errors: (none)
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:00:48] 2025-11-24 03:40:40,329 | INFO     | pilot state: finished 
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | transexitcode: 0
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | exeerrorcode: 0
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | exeerrordiag: 
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | exitcode: 0
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | exitmsg: OK
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | cpuconsumptiontime: 272747 s
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | nevents: 1000
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | neventsw: 0
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | pid: 1954050
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | pgrp: 1954050
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | corecount: 12
[2025-11-24 00:00:48] 2025-11-24 03:40:40,330 | INFO     | event service: False
[2025-11-24 00:00:48] 2025-11-24 03:40:40,331 | INFO     | sizes: {0: 2298534, 1: 2298562, 2: 2298761, 3: 2298761, 14: 2298789, 26: 2298817, 35: 2299235, 38: 2299263, 80831: 2360069, 80850: 2369063, 80853: 2369119, 80884: 
[2025-11-24 00:00:48] 2025-11-24 03:40:40,331 | INFO     | --------------------------------------------------
[2025-11-24 00:00:48] 2025-11-24 03:40:40,331 | INFO     | 
[2025-11-24 00:00:48] 2025-11-24 03:40:40,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:00:48] 2025-11-24 03:40:40,518 | INFO     | job 6894289741 has completed (purged errors)
[2025-11-24 00:00:48] 2025-11-24 03:40:40,518 | INFO     | overall cleanup function is called
[2025-11-24 00:00:48] 2025-11-24 03:40:41,616 | INFO     | --- collectZombieJob: --- 10, [1954050]
[2025-11-24 00:00:48] 2025-11-24 03:40:41,617 | INFO     | zombie collector waiting for pid 1954050
[2025-11-24 00:00:48] 2025-11-24 03:40:41,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:00:48] 2025-11-24 03:40:41,617 | INFO     | collected zombie processes
[2025-11-24 00:00:48] 2025-11-24 03:40:41,617 | INFO     | will attempt to kill all subprocesses of pid=1954050
[2025-11-24 00:00:48] 2025-11-24 03:40:43,558 | INFO     | process IDs to be killed: [1954050] (in reverse order)
[2025-11-24 00:00:48] 2025-11-24 03:40:44,350 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:00:48] 2025-11-24 03:40:44,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:00:48] 2025-11-24 03:40:44,384 | INFO     | did not find any defunct processes belonging to 1954050
[2025-11-24 00:00:48] 2025-11-24 03:40:44,400 | INFO     | did not find any defunct processes belonging to 1954050
[2025-11-24 00:00:48] 2025-11-24 03:40:44,401 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:00:48] 2025-11-24 03:40:44,402 | INFO     | ready for new job
[2025-11-24 00:00:48] 2025-11-24 03:40:44,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:00:48] 2025-11-24 03:40:44,421 | INFO     | ***************************************
[2025-11-24 00:00:48] 2025-11-24 03:40:44,422 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:00:48] 2025-11-24 03:40:44,422 | INFO     | ***************************************
[2025-11-24 00:00:48] 2025-11-24 03:40:44,422 | INFO     | 
[2025-11-24 00:00:48] 2025-11-24 03:40:44,447 | INFO     | architecture information:
[2025-11-24 00:00:48] 2025-11-24 03:40:44,468 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:00:48] 2025-11-24 03:40:44,558 | INFO     | cat /etc/os-release:
[2025-11-24 00:00:48] NAME="CentOS Linux"
[2025-11-24 00:00:48] VERSION="7 (Core)"
[2025-11-24 00:00:48] ID="centos"
[2025-11-24 00:00:48] ID_LIKE="rhel fedora"
[2025-11-24 00:00:48] VERSION_ID="7"
[2025-11-24 00:00:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:00:48] ANSI_COLOR="0;31"
[2025-11-24 00:00:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:00:48] HOME_URL="https://www.centos.org/"
[2025-11-24 00:00:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:00:48] 
[2025-11-24 00:00:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:00:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:00:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:00:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:00:48] 
[2025-11-24 00:00:48] 2025-11-24 03:40:44,558 | INFO     | ***************************************
[2025-11-24 00:00:48] 2025-11-24 03:40:45,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-24 00:00:48] 2025-11-24 03:40:45,133 | INFO     | sufficient remaining disk space (119243014144 B)
[2025-11-24 00:00:48] 2025-11-24 03:40:45,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:00:48] 2025-11-24 03:40:45,133 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:00:48] 2025-11-24 03:40:45,133 | INFO     | update_server=False
[2025-11-24 00:00:48] 2025-11-24 03:40:45,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:00:48] 2025-11-24 03:40:45,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:00:48] 2025-11-24 03:40:45,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:00:48] 2025-11-24 03:40:45,255 | INFO     | aborting loop
[2025-11-24 00:00:48] 2025-11-24 03:40:45,346 | INFO     | all payload control threads have been joined
[2025-11-24 00:00:48] 2025-11-24 03:40:45,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:00:48] 2025-11-24 03:40:45,704 | INFO     | all data control threads have been joined
[2025-11-24 00:00:48] 2025-11-24 03:40:45,731 | INFO     | all job control threads have been joined
[2025-11-24 00:00:48] 2025-11-24 03:40:46,140 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,261 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,353 | INFO     | [payload] control thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,446 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,517 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,712 | INFO     | [data] control thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,738 | INFO     | [job] control thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,896 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,900 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,900 | INFO     | [job] validate thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:46,905 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:47,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:00:48] 2025-11-24 03:40:47,128 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:47,143 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:47,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:47,392 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:51,158 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:00:48] 2025-11-24 03:40:55,532 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:00:48] 2025-11-24 03:40:56,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886032422720)>', '<ExcThread(monitor, started 139885541324544)>']
[2025-11-24 00:00:48] 2025-11-24 03:41:01,484 | INFO     | all workflow threads have been joined
[2025-11-24 00:00:48] 2025-11-24 03:41:01,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:00:48] 2025-11-24 03:41:01,485 | INFO     | traces error code: 0
[2025-11-24 00:00:48] 2025-11-24 03:41:01,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:00:48] 2025-11-24 03:41:18,614 | INFO     | PID=1939599 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:00:48] 2025-11-24 03:41:18,615 | INFO     | .. there are 24 such processes running
[2025-11-24 00:00:48] 2025-11-24 03:41:18,616 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:00:48] 2025-11-24 03:41:18,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:00:48] 2025-11-24 03:41:18,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:00:48] 2025-11-24 03:41:18,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:00:48] 2025-11-24 03:41:18,616 | INFO     | [monitor] control thread has ended
[2025-11-24 00:00:48] 2025-11-24 03:41:19,772 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:00:48] 2025-11-24 03:41:19,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:00:48] 2025-11-24 03:41:19,854 [wrapper] pilotpid: 1939599
[2025-11-24 00:00:48] 2025-11-24 03:41:19,885 [wrapper] Pilot exit status: 0
[2025-11-24 00:00:48] 2025-11-24 03:41:20,003 [wrapper] pandaids: 6894289741
[2025-11-24 00:00:48] 2025-11-24 03:41:20,275 [wrapper] cleanup supervisor_pilot  659301 1939600
[2025-11-24 00:00:48] 2025-11-24 03:41:20,289 [wrapper] Test setup, not cleaning
[2025-11-24 00:00:48] 2025-11-24 03:41:20,304 [wrapper] apfmon messages muted
[2025-11-24 00:00:48] 2025-11-24 03:41:20,342 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:00:48] 2025-11-24 03:41:20,354 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:00:48]  *** Error codes and diagnostics ***
[2025-11-24 00:00:48]     "exeErrorCode": 0,
[2025-11-24 00:00:48]     "exeErrorDiag": "",
[2025-11-24 00:00:48]     "pilotErrorCode": 0,
[2025-11-24 00:00:48]     "pilotErrorDiag": "",
[2025-11-24 00:00:48]  *** Listing of results directory ***
[2025-11-24 00:00:49] total 1324764
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 06:32 pilot3.tar.gz
[2025-11-24 00:00:49] -rwx------. 1 boincer umatlas     36292 Nov 21 06:34 runpilot2-wrapper.sh
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:34 queuedata.json
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:00:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:10 run_atlas
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:10 job.xml
[2025-11-24 00:00:49] -rw-r--r--. 2 boincer umatlas 411196552 Nov 23 00:10 EVNT.47493127._002414.pool.root.1
[2025-11-24 00:00:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 00:00:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:10 shared
[2025-11-24 00:00:49] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 00:10 input.tar.gz
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:10 boinc_lockfile
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:10 pandaJob.out
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas        57 Nov 23 00:10 setup.sh.local
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas    989784 Nov 23 00:11 agis_schedconf.cvmfs.json
[2025-11-24 00:00:49] drwx------. 5 boincer umatlas      4096 Nov 23 00:11 pilot3
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas       531 Nov 23 22:19 boinc_task_state.xml
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas 916655552 Nov 23 22:38 HITS.47533967._003853.pool.root.1
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas      1073 Nov 23 22:39 memory_monitor_summary.json
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas   1526164 Nov 23 22:39 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas   2786500 Nov 23 22:40 log.47533967._003853.job.log.tgz.1
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas      8664 Nov 23 22:40 heartbeat.json
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas       823 Nov 23 22:41 pilotlog.txt
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas        95 Nov 23 22:41 pilot_heartbeat.json
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas   9606271 Nov 23 22:41 log.47533967._003853.job.log.1
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas       353 Nov 23 22:41 output.list
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas       620 Nov 23 22:41 runtime_log
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas  12410880 Nov 23 22:41 result.tar.gz
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas      9355 Nov 23 22:41 runtime_log.err
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas       667 Nov 23 22:41 22zNDmkaeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFMJKDmnDbAEo.diag
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas        28 Nov 24 00:00 wrapper_checkpoint.txt
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas      6879 Nov 24 00:00 init_data.xml
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 00:00 boinc_mmap_file
[2025-11-24 00:00:49] -rw-r--r--. 1 boincer umatlas     21575 Nov 24 00:00 stderr.txt
[2025-11-24 00:00:49] HITS file was successfully produced:
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas 916655552 Nov 23 22:38 shared/HITS.pool.root.1
[2025-11-24 00:00:49]  *** Contents of shared directory: ***
[2025-11-24 00:00:49] total 1309456
[2025-11-24 00:00:49] -rw-r--r--. 2 boincer umatlas 411196552 Nov 23 00:10 ATLAS.root_0
[2025-11-24 00:00:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 00:00:49] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 00:10 input.tar.gz
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas 916655552 Nov 23 22:38 HITS.pool.root.1
[2025-11-24 00:00:49] -rw-------. 1 boincer umatlas  12410880 Nov 23 22:41 result.tar.gz
00:00:50 (1932477): run_atlas exited; CPU time 274848.488635
00:00:50 (1932477): called boinc_finish(0)

</stderr_txt>
]]>

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