Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:07 (2894138): wrapper (7.7.26015): starting
19:04:07 (2894138): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 19:04:07] Arguments: --nthreads 3
[2025-11-25 19:04:07] Threads: 3
[2025-11-25 19:04:07] Checking for CVMFS
[2025-11-25 19:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:04:07] 2.9.2.0 1559605 9976 91740 153292 1 81 36858766 36864000 0 130560 2 3663185 99.926 521336 718 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 19:04:07] CVMFS is ok
[2025-11-25 19:04:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:04:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:04:07] Further information can be found at the LHC@home message board.
[2025-11-25 19:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:04:07] Checking for apptainer binary...
[2025-11-25 19:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:04:07] Running /usr/bin/apptainer --version
[2025-11-25 19:04:07] apptainer version 1.4.1-1.1
[2025-11-25 19:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:04:07] atlasA223
[2025-11-25 19:04:07] apptainer works
[2025-11-25 19:04:07] Set ATHENA_PROC_NUMBER=3
[2025-11-25 19:04:07] Set ATHENA_CORE_NUMBER=3
[2025-11-25 19:04:07] Starting ATLAS job with PandaID=6893876611
[2025-11-25 19:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:23:51]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:23:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:23:51] 
[2025-11-26 03:23:51] 2025-11-26 02:23:14,500 | INFO     | ***************************************
[2025-11-26 03:23:51] 2025-11-26 02:23:15,003 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | INFO     | sufficient remaining disk space (383749455872 B)
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | INFO     | update_server=False
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:23:51] 2025-11-26 02:23:15,015 | INFO     | aborting loop
[2025-11-26 03:23:51] 2025-11-26 02:23:15,034 | INFO     | all data control threads have been joined
[2025-11-26 03:23:51] 2025-11-26 02:23:15,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:23:51] 2025-11-26 02:23:16,021 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,021 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,021 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,039 | INFO     | [data] control thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,102 | INFO     | all payload control threads have been joined
[2025-11-26 03:23:51] 2025-11-26 02:23:16,359 | INFO     | all job control threads have been joined
[2025-11-26 03:23:51] 2025-11-26 02:23:16,500 | INFO     | [job] validate thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,629 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,699 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,793 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:16,907 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:17,021 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:17,108 | INFO     | [payload] control thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:17,365 | INFO     | [job] control thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:17,441 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:17,491 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:19,859 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:25,215 | INFO     | job.realtimelogging is not enabled
[2025-11-26 03:23:51] 2025-11-26 02:23:26,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:23:51] 2025-11-26 02:23:45,396 | INFO     | PID=2897857 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 03:23:51] 2025-11-26 02:23:45,397 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:23:51] 2025-11-26 02:23:45,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:23:51] 2025-11-26 02:23:45,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:23:51] 2025-11-26 02:23:45,924 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:23:51] 2025-11-26 02:23:46,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073085192000)>', '<ExcThread(monitor, started 140072305293056)>']
[2025-11-26 03:23:51] 2025-11-26 02:23:46,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:23:51] 2025-11-26 02:23:46,403 | INFO     | [monitor] control thread has ended
[2025-11-26 03:23:51] 2025-11-26 02:23:51,253 | INFO     | all workflow threads have been joined
[2025-11-26 03:23:51] 2025-11-26 02:23:51,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:23:51] 2025-11-26 02:23:51,253 | INFO     | traces error code: 0
[2025-11-26 03:23:51] 2025-11-26 02:23:51,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:23:51] 2025-11-26 02:23:51,304 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:23:51] 2025-11-26 02:23:51,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:23:51] 2025-11-26 02:23:51,309 [wrapper] pilotpid: 2897857
[2025-11-26 03:23:51] 2025-11-26 02:23:51,311 [wrapper] Pilot exit status: 0
[2025-11-26 03:23:51] 2025-11-26 02:23:51,319 [wrapper] pandaids: 6893876611
[2025-11-26 03:23:51] 2025-11-26 02:23:51,335 [wrapper] cleanup supervisor_pilot 2956379 2897858
[2025-11-26 03:23:51] 2025-11-26 02:23:51,337 [wrapper] Test setup, not cleaning
[2025-11-26 03:23:51] 2025-11-26 02:23:51,339 [wrapper] apfmon messages muted
[2025-11-26 03:23:51] 2025-11-26 02:23:51,342 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:23:51] 2025-11-26 02:23:51,344 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:23:51]  *** Error codes and diagnostics ***
[2025-11-26 03:23:51]     "exeErrorCode": 0,
[2025-11-26 03:23:51]     "exeErrorDiag": "",
[2025-11-26 03:23:51]     "pilotErrorCode": 0,
[2025-11-26 03:23:51]     "pilotErrorDiag": "",
[2025-11-26 03:23:51]  *** Listing of results directory ***
[2025-11-26 03:23:51] total 1318256
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc    576529 Nov 20 18:21 pilot3.tar.gz
[2025-11-26 03:23:51] -rwx------ 1 boinc boinc     36292 Nov 20 18:30 runpilot2-wrapper.sh
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc      5112 Nov 20 18:30 queuedata.json
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc       100 Nov 25 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:23:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 19:04 run_atlas
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc       105 Nov 25 19:04 job.xml
[2025-11-26 03:23:51] -rw-r--r-- 2 boinc boinc 409164414 Nov 25 19:04 EVNT.47493127._000763.pool.root.1
[2025-11-26 03:23:51] -rw-r--r-- 2 boinc boinc    590099 Nov 25 19:04 input.tar.gz
[2025-11-26 03:23:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:04 start_atlas.sh
[2025-11-26 03:23:51] drwxrwx--x 2 boinc boinc      4096 Nov 25 19:04 shared
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc         0 Nov 25 19:04 boinc_setup_complete
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc      6447 Nov 25 19:04 init_data.xml
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc         0 Nov 25 19:04 boinc_lockfile
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc      2784 Nov 25 19:04 pandaJob.out
[2025-11-26 03:23:51] -rw------- 1 boinc boinc    991543 Nov 25 19:04 agis_schedconf.cvmfs.json
[2025-11-26 03:23:51] drwx------ 5 boinc boinc      4096 Nov 25 19:04 pilot3
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc       531 Nov 26 03:19 boinc_task_state.xml
[2025-11-26 03:23:51] -rw------- 1 boinc boinc 926059155 Nov 26 03:22 HITS.47523449._007626.pool.root.1
[2025-11-26 03:23:51] -rw------- 1 boinc boinc      1036 Nov 26 03:23 memory_monitor_summary.json
[2025-11-26 03:23:51] -rw------- 1 boinc boinc   1516240 Nov 26 03:23 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:23:51] -rw------- 1 boinc boinc   1169616 Nov 26 03:23 log.47523449._007626.job.log.tgz.1
[2025-11-26 03:23:51] -rw------- 1 boinc boinc      8563 Nov 26 03:23 heartbeat.json
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc      8192 Nov 26 03:23 boinc_mmap_file
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc        28 Nov 26 03:23 wrapper_checkpoint.txt
[2025-11-26 03:23:51] -rw------- 1 boinc boinc        95 Nov 26 03:23 pilot_heartbeat.json
[2025-11-26 03:23:51] -rw------- 1 boinc boinc      4824 Nov 26 03:23 pilotlog.txt
[2025-11-26 03:23:51] -rw------- 1 boinc boinc   4213724 Nov 26 03:23 log.47523449._007626.job.log.1
[2025-11-26 03:23:51] -rw------- 1 boinc boinc       353 Nov 26 03:23 output.list
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc       620 Nov 26 03:23 runtime_log
[2025-11-26 03:23:51] -rw------- 1 boinc boinc   5406720 Nov 26 03:23 result.tar.gz
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc      8913 Nov 26 03:23 runtime_log.err
[2025-11-26 03:23:51] -rw------- 1 boinc boinc       668 Nov 26 03:23 aLaKDmdfNg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTMIKDmkZxkUm.diag
[2025-11-26 03:23:51] -rw-r--r-- 1 boinc boinc      8138 Nov 26 03:23 stderr.txt
[2025-11-26 03:23:51] HITS file was successfully produced:
[2025-11-26 03:23:51] -rw------- 1 boinc boinc 926059155 Nov 26 03:22 shared/HITS.pool.root.1
[2025-11-26 03:23:51]  *** Contents of shared directory: ***
[2025-11-26 03:23:51] total 1309816
[2025-11-26 03:23:51] -rw-r--r-- 2 boinc boinc 409164414 Nov 25 19:04 ATLAS.root_0
[2025-11-26 03:23:51] -rw-r--r-- 2 boinc boinc    590099 Nov 25 19:04 input.tar.gz
[2025-11-26 03:23:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:04 start_atlas.sh
[2025-11-26 03:23:51] -rw------- 1 boinc boinc 926059155 Nov 26 03:22 HITS.pool.root.1
[2025-11-26 03:23:51] -rw------- 1 boinc boinc   5406720 Nov 26 03:23 result.tar.gz
03:23:52 (2894138): run_atlas exited; CPU time 88506.200610
03:23:52 (2894138): called boinc_finish(0)

</stderr_txt>
]]>

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