Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:39 (2721320): wrapper (7.7.26015): starting
00:10:39 (2721320): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:10:39] Arguments: --nthreads 9
[2025-11-23 00:10:39] Threads: 9
[2025-11-23 00:10:39] Checking for CVMFS
[2025-11-23 00:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:10:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:10:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:10:42] 2.13.3.0 10982 25293 372128 153197 0 673 35728132 40960001 25012 16776704 0 130858186 99.700 98068973 38008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:10:42] CVMFS is ok
[2025-11-23 00:10:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:10:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:10:42] Further information can be found at the LHC@home message board.
[2025-11-23 00:10:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:10:42] Checking for apptainer binary...
[2025-11-23 00:10:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:10:42] Running /usr/bin/apptainer --version
[2025-11-23 00:10:42] apptainer version 1.4.4-1.el9
[2025-11-23 00:10:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:10:42] c6-8-12-3.aglt2.org
[2025-11-23 00:10:42] apptainer works
[2025-11-23 00:10:42] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:10:42] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:10:42] Starting ATLAS job with PandaID=6894289657
[2025-11-23 00:10:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:23:22]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:23:22] 2025-11-25 00:22:42,327 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3074.2263392857144
[2025-11-24 19:23:22] 2025-11-25 00:22:42,337 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894289657/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:23:22] 2025-11-25 00:22:42,338 | INFO     | extracted standard info from prmon json
[2025-11-24 19:23:22] 2025-11-25 00:22:42,338 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:23:22] 2025-11-25 00:22:42,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:23:22] 2025-11-25 00:22:42,373 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:23:22] 2025-11-25 00:22:42,376 | INFO     | sum of square deviations: 5104523342052.739
[2025-11-24 19:23:22] 2025-11-25 00:22:42,496 | INFO     | sum of deviations: 25792405708052.97
[2025-11-24 19:23:22] 2025-11-25 00:22:42,496 | INFO     | mean x: 1763952548.2091196
[2025-11-24 19:23:22] 2025-11-25 00:22:42,496 | INFO     | mean y: 3049671.5338050313
[2025-11-24 19:23:22] 2025-11-25 00:22:42,496 | INFO     | intersect: -8909943124.159323
[2025-11-24 19:23:22] 2025-11-25 00:22:42,498 | INFO     | chi2: 17.086960941852663
[2025-11-24 19:23:22] 2025-11-25 00:22:42,502 | INFO     | sum of square deviations: 5074483530211.644
[2025-11-24 19:23:22] 2025-11-25 00:22:42,616 | INFO     | sum of deviations: 26629640125246.7
[2025-11-24 19:23:22] 2025-11-25 00:22:42,616 | INFO     | mean x: 1763952395.718393
[2025-11-24 19:23:22] 2025-11-25 00:22:42,616 | INFO     | mean y: 3053921.0177235133
[2025-11-24 19:23:22] 2025-11-25 00:22:42,616 | INFO     | intersect: -9253733930.669014
[2025-11-24 19:23:22] 2025-11-25 00:22:42,619 | INFO     | chi2: 14.234244278833854
[2025-11-24 19:23:22] 2025-11-25 00:22:42,619 | INFO     | current chi2=14.234244278833854 (change=16.695284039839922 %)
[2025-11-24 19:23:22] 2025-11-25 00:22:42,619 | INFO     | right removable region: 2538
[2025-11-24 19:23:22] 2025-11-25 00:22:42,622 | INFO     | sum of square deviations: 5074476222411.649
[2025-11-24 19:23:22] 2025-11-25 00:22:42,746 | INFO     | sum of deviations: 24665985093715.477
[2025-11-24 19:23:22] 2025-11-25 00:22:42,747 | INFO     | mean x: 1763952700.718393
[2025-11-24 19:23:22] 2025-11-25 00:22:42,747 | INFO     | mean y: 3055388.6159905475
[2025-11-24 19:23:22] 2025-11-25 00:22:42,747 | INFO     | intersect: -8571155843.230327
[2025-11-24 19:23:22] 2025-11-25 00:22:42,749 | INFO     | chi2: 12.565660533634418
[2025-11-24 19:23:22] 2025-11-25 00:22:42,750 | INFO     | current chi2=12.565660533634418 (change=26.46052989530636 %)
[2025-11-24 19:23:22] 2025-11-25 00:22:42,752 | INFO     | sum of square deviations: 5044547352651.066
[2025-11-24 19:23:22] 2025-11-25 00:22:42,901 | INFO     | sum of deviations: 23690297259977.277
[2025-11-24 19:23:22] 2025-11-25 00:22:42,901 | INFO     | mean x: 1763952853.2273085
[2025-11-24 19:23:22] 2025-11-25 00:22:42,901 | INFO     | mean y: 3060360.6176006314
[2025-11-24 19:23:22] 2025-11-25 00:22:42,901 | INFO     | intersect: -8280847892.038372
[2025-11-24 19:23:22] 2025-11-25 00:22:42,904 | INFO     | chi2: 9.335422883379284
[2025-11-24 19:23:22] 2025-11-25 00:22:42,904 | INFO     | current chi2=9.335422883379284 (change=25.70686707323327 %)
[2025-11-24 19:23:22] 2025-11-25 00:22:42,907 | INFO     | sum of square deviations: 5014736346053.074
[2025-11-24 19:23:22] 2025-11-25 00:22:43,037 | INFO     | sum of deviations: 22870122244325.055
[2025-11-24 19:23:22] 2025-11-25 00:22:43,038 | INFO     | mean x: 1763953005.7362595
[2025-11-24 19:23:22] 2025-11-25 00:22:43,038 | INFO     | mean y: 3064556.022538553
[2025-11-24 19:23:22] 2025-11-25 00:22:43,038 | INFO     | intersect: -8041589856.603665
[2025-11-24 19:23:22] 2025-11-25 00:22:43,040 | INFO     | chi2: 7.185623046595257
[2025-11-24 19:23:22] 2025-11-25 00:22:43,040 | INFO     | current chi2=7.185623046595257 (change=23.028414070149026 %)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,040 | INFO     | left removable region: 30
[2025-11-24 19:23:22] 2025-11-25 00:22:43,043 | INFO     | sum of square deviations: 4890825275209.357
[2025-11-24 19:23:22] 2025-11-25 00:22:43,063 | INFO     | time since job start (155407s) is within the limit (172800.0s)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,164 | INFO     | sum of deviations: 22497763012960.18
[2025-11-24 19:23:22] 2025-11-25 00:22:43,164 | INFO     | mean x: 1763953280.2623603
[2025-11-24 19:23:22] 2025-11-25 00:22:43,165 | INFO     | mean y: 3076016.3006379586
[2025-11-24 19:23:22] 2025-11-25 00:22:43,165 | INFO     | intersect: -8111097079.686224
[2025-11-24 19:23:22] 2025-11-25 00:22:43,168 | INFO     | chi2: 2.4214786067912066
[2025-11-24 19:23:22] 2025-11-25 00:22:43,168 | INFO     | current memory leak: 4.60 B/s (using 2508 data points, chi2=2.42)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,170 | INFO     | could have reported an average CPU frequency of 2988 MHz (88 samples)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,170 | INFO     | ..............................
[2025-11-24 19:23:22] 2025-11-25 00:22:43,170 | INFO     | . Timing measurements:
[2025-11-24 19:23:22] 2025-11-25 00:22:43,170 | INFO     | . get job = 0 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | . initial setup = 10 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | . payload setup = 71 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | . stage-in = 0 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | . payload execution = 155218 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | . stage-out = 5 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | . log creation = 1 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,171 | INFO     | ..............................
[2025-11-24 19:23:22] 2025-11-25 00:22:43,491 | INFO     | 
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | job summary report
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | --------------------------------------------------
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | PanDA job id: 6894289657
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | task id: 47533967
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | errors: (none)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | pilot state: finished 
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | transexitcode: 0
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | exeerrorcode: 0
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | exeerrordiag: 
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | exitcode: 0
[2025-11-24 19:23:22] 2025-11-25 00:22:43,492 | INFO     | exitmsg: OK
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | cpuconsumptiontime: 258218 s
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | nevents: 1000
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | neventsw: 0
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | pid: 2762821
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | pgrp: 2762821
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | corecount: 9
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | event service: False
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | sizes: {0: 2297928, 1: 2298529, 2: 2298641, 3: 2298812, 4: 2298840, 5: 2298868, 16: 2299052, 27: 2299080, 40: 2299108, 46: 2299398, 52: 2299426, 155290: 2396876, 1
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | --------------------------------------------------
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | 
[2025-11-24 19:23:22] 2025-11-25 00:22:43,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 19:23:22] 2025-11-25 00:22:43,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:23:22] 2025-11-25 00:22:43,519 | INFO     | job 6894289657 has completed (purged errors)
[2025-11-24 19:23:22] 2025-11-25 00:22:43,519 | INFO     | overall cleanup function is called
[2025-11-24 19:23:22] 2025-11-25 00:22:44,552 | INFO     | --- collectZombieJob: --- 10, [2762821]
[2025-11-24 19:23:22] 2025-11-25 00:22:44,552 | INFO     | zombie collector waiting for pid 2762821
[2025-11-24 19:23:22] 2025-11-25 00:22:44,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:23:22] 2025-11-25 00:22:44,552 | INFO     | collected zombie processes
[2025-11-24 19:23:22] 2025-11-25 00:22:44,552 | INFO     | will attempt to kill all subprocesses of pid=2762821
[2025-11-24 19:23:22] 2025-11-25 00:22:44,950 | INFO     | process IDs to be killed: [2762821] (in reverse order)
[2025-11-24 19:23:22] 2025-11-25 00:22:45,106 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:23:22] 2025-11-25 00:22:45,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:23:22] 2025-11-25 00:22:45,127 | INFO     | did not find any defunct processes belonging to 2762821
[2025-11-24 19:23:22] 2025-11-25 00:22:45,143 | INFO     | did not find any defunct processes belonging to 2762821
[2025-11-24 19:23:22] 2025-11-25 00:22:45,145 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:23:22] 2025-11-25 00:22:45,145 | INFO     | ready for new job
[2025-11-24 19:23:22] 2025-11-25 00:22:45,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:23:22] 2025-11-25 00:22:45,155 | INFO     | ***************************************
[2025-11-24 19:23:22] 2025-11-25 00:22:45,155 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:23:22] 2025-11-25 00:22:45,155 | INFO     | ***************************************
[2025-11-24 19:23:22] 2025-11-25 00:22:45,155 | INFO     | 
[2025-11-24 19:23:22] 2025-11-25 00:22:45,166 | INFO     | architecture information:
[2025-11-24 19:23:22] 2025-11-25 00:22:45,168 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:23:22] 2025-11-25 00:22:45,204 | INFO     | cat /etc/os-release:
[2025-11-24 19:23:22] NAME="CentOS Linux"
[2025-11-24 19:23:22] VERSION="7 (Core)"
[2025-11-24 19:23:22] ID="centos"
[2025-11-24 19:23:22] ID_LIKE="rhel fedora"
[2025-11-24 19:23:22] VERSION_ID="7"
[2025-11-24 19:23:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:23:22] ANSI_COLOR="0;31"
[2025-11-24 19:23:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:23:22] HOME_URL="https://www.centos.org/"
[2025-11-24 19:23:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:23:22] 
[2025-11-24 19:23:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:23:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:23:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:23:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:23:22] 
[2025-11-24 19:23:22] 2025-11-25 00:22:45,205 | INFO     | ***************************************
[2025-11-24 19:23:22] 2025-11-25 00:22:45,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 19:23:22] 2025-11-25 00:22:45,734 | INFO     | sufficient remaining disk space (47032827904 B)
[2025-11-24 19:23:22] 2025-11-25 00:22:45,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:23:22] 2025-11-25 00:22:45,735 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:23:22] 2025-11-25 00:22:45,735 | INFO     | update_server=False
[2025-11-24 19:23:22] 2025-11-25 00:22:45,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:23:22] 2025-11-25 00:22:45,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:23:22] 2025-11-25 00:22:45,815 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 19:23:22] 2025-11-25 00:22:45,815 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 19:23:22] 2025-11-25 00:22:45,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:23:22] 2025-11-25 00:22:45,815 | INFO     | will abort loop
[2025-11-24 19:23:22] 2025-11-25 00:22:45,872 | INFO     | all data control threads have been joined
[2025-11-24 19:23:22] 2025-11-25 00:22:46,058 | INFO     | all job control threads have been joined
[2025-11-24 19:23:22] 2025-11-25 00:22:46,741 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:46,821 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:46,878 | INFO     | [data] control thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:46,928 | INFO     | all payload control threads have been joined
[2025-11-24 19:23:22] 2025-11-25 00:22:46,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:23:22] 2025-11-25 00:22:46,967 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,063 | INFO     | [job] control thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,111 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,247 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,343 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,361 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,612 | INFO     | [job] validate thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,934 | INFO     | [payload] control thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:47,980 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:48,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:23:22] 2025-11-25 00:22:48,959 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:49,294 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:49,751 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:22:56,185 | INFO     | job.realtimelogging is not enabled
[2025-11-24 19:23:22] 2025-11-25 00:22:57,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:23:22] 2025-11-25 00:23:14,709 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:23:22] 2025-11-25 00:23:16,657 | INFO     | PID=2731792 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:23:22] 2025-11-25 00:23:16,657 | INFO     | .. there are 37 such processes running
[2025-11-24 19:23:22] 2025-11-25 00:23:16,658 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:23:22] 2025-11-25 00:23:16,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:23:22] 2025-11-25 00:23:16,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:23:22] 2025-11-25 00:23:16,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626796123968)>', '<ExcThread(monitor, started 139625989383936)>']
[2025-11-24 19:23:22] 2025-11-25 00:23:17,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:23:22] 2025-11-25 00:23:17,664 | INFO     | [monitor] control thread has ended
[2025-11-24 19:23:22] 2025-11-25 00:23:21,857 | INFO     | all workflow threads have been joined
[2025-11-24 19:23:22] 2025-11-25 00:23:21,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:23:22] 2025-11-25 00:23:21,859 | INFO     | traces error code: 0
[2025-11-24 19:23:22] 2025-11-25 00:23:21,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:23:22] 2025-11-25 00:23:22,102 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:23:22] 2025-11-25 00:23:22,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:23:22] 2025-11-25 00:23:22,131 [wrapper] pilotpid: 2731792
[2025-11-24 19:23:22] 2025-11-25 00:23:22,146 [wrapper] Pilot exit status: 0
[2025-11-24 19:23:22] 2025-11-25 00:23:22,162 [wrapper] pandaids: 6894289657
[2025-11-24 19:23:22] 2025-11-25 00:23:22,239 [wrapper] cleanup supervisor_pilot 2925829 2731793
[2025-11-24 19:23:22] 2025-11-25 00:23:22,242 [wrapper] Test setup, not cleaning
[2025-11-24 19:23:22] 2025-11-25 00:23:22,256 [wrapper] apfmon messages muted
[2025-11-24 19:23:22] 2025-11-25 00:23:22,260 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:23:22] 2025-11-25 00:23:22,263 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:23:22]  *** Error codes and diagnostics ***
[2025-11-24 19:23:22]     "exeErrorCode": 0,
[2025-11-24 19:23:22]     "exeErrorDiag": "",
[2025-11-24 19:23:22]     "pilotErrorCode": 0,
[2025-11-24 19:23:22]     "pilotErrorDiag": "",
[2025-11-24 19:23:22]  *** Listing of results directory ***
[2025-11-24 19:23:22] total 1336732
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 06:23 pilot3.tar.gz
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:24 queuedata.json
[2025-11-24 19:23:22] -rwx------. 1 boincer umatlas     36292 Nov 21 06:25 runpilot2-wrapper.sh
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:23:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:10 run_atlas
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:10 job.xml
[2025-11-24 19:23:22] -rw-r--r--. 2 boincer umatlas 409453959 Nov 23 00:10 EVNT.47493127._002408.pool.root.1
[2025-11-24 19:23:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 19:23:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:10 shared
[2025-11-24 19:23:22] -rw-r--r--. 2 boincer umatlas    590106 Nov 23 00:10 input.tar.gz
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:10 boinc_lockfile
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:10 pandaJob.out
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas        57 Nov 23 00:10 setup.sh.local
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas    989784 Nov 23 00:12 agis_schedconf.cvmfs.json
[2025-11-24 19:23:22] drwx------. 5 boincer umatlas      4096 Nov 23 00:12 pilot3
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas       534 Nov 24 19:14 boinc_task_state.xml
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas      6845 Nov 24 19:19 init_data.xml
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas 908392563 Nov 24 19:21 HITS.47533967._003794.pool.root.1
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas      1067 Nov 24 19:22 memory_monitor_summary.json
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:22 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas   3429021 Nov 24 19:22 log.47533967._003794.job.log.tgz.1
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas      8638 Nov 24 19:22 heartbeat.json
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas        95 Nov 24 19:23 pilot_heartbeat.json
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:23 boinc_mmap_file
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas        30 Nov 24 19:23 wrapper_checkpoint.txt
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas      5082 Nov 24 19:23 pilotlog.txt
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas  20091991 Nov 24 19:23 log.47533967._003794.job.log.1
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas       353 Nov 24 19:23 output.list
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:23 runtime_log
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas  23541760 Nov 24 19:23 result.tar.gz
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas      9349 Nov 24 19:23 runtime_log.err
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas       668 Nov 24 19:23 6rvLDmhReg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQZHKDmvN3Jmn.diag
[2025-11-24 19:23:22] -rw-r--r--. 1 boincer umatlas     21360 Nov 24 19:23 stderr.txt
[2025-11-24 19:23:22] HITS file was successfully produced:
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas 908392563 Nov 24 19:21 shared/HITS.pool.root.1
[2025-11-24 19:23:22]  *** Contents of shared directory: ***
[2025-11-24 19:23:22] total 1310560
[2025-11-24 19:23:22] -rw-r--r--. 2 boincer umatlas 409453959 Nov 23 00:10 ATLAS.root_0
[2025-11-24 19:23:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 19:23:22] -rw-r--r--. 2 boincer umatlas    590106 Nov 23 00:10 input.tar.gz
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas 908392563 Nov 24 19:21 HITS.pool.root.1
[2025-11-24 19:23:22] -rw-------. 1 boincer umatlas  23541760 Nov 24 19:23 result.tar.gz
19:23:24 (2721320): run_atlas exited; CPU time 261643.538324
19:23:24 (2721320): called boinc_finish(0)

</stderr_txt>
]]>

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