Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:12:53 (3988592): wrapper (7.7.26015): starting
10:12:53 (3988592): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 10:12:53] Arguments: --nthreads 8
[2025-11-23 10:12:53] Threads: 8
[2025-11-23 10:12:53] Checking for CVMFS
[2025-11-23 10:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:12:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:12:54] 2.13.2.0 6122 30963 364796 153212 2 243 26331548 40960001 13758 16776704 0 61609491 99.592 67999848 40388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:12:54] CVMFS is ok
[2025-11-23 10:12:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:12:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:12:54] Further information can be found at the LHC@home message board.
[2025-11-23 10:12:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:12:54] Checking for apptainer binary...
[2025-11-23 10:12:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:12:54] Running /usr/bin/apptainer --version
[2025-11-23 10:12:54] apptainer version 1.4.4-1.el9
[2025-11-23 10:12:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:12:54] c-210-35-2.aglt2.org
[2025-11-23 10:12:54] apptainer works
[2025-11-23 10:12:55] Set ATHENA_PROC_NUMBER=8
[2025-11-23 10:12:55] Set ATHENA_CORE_NUMBER=8
[2025-11-23 10:12:55] Starting ATLAS job with PandaID=6895335445
[2025-11-23 10:12:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:04 (3988592): BOINC client no longer exists - exiting
07:40:04 (3988592): timer handler: client dead, exiting
08:36:51 (2422736): wrapper (7.7.26015): starting
08:36:51 (2422736): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 08:36:51] Arguments: --nthreads 8
[2025-11-24 08:36:51] Threads: 8
[2025-11-24 08:36:51] This job has been restarted, cleaning up previous attempt
[2025-11-24 08:36:52] Checking for CVMFS
[2025-11-24 08:36:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:36:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:36:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:36:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:36:54] 2.13.2.0 6122 32307 378292 153247 0 318 40145612 40960000 15605 16776704 0 65110201 99.594 71494243 40046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:36:54] CVMFS is ok
[2025-11-24 08:36:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:36:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:36:54] Further information can be found at the LHC@home message board.
[2025-11-24 08:36:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:36:54] Checking for apptainer binary...
[2025-11-24 08:36:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:36:54] Running /usr/bin/apptainer --version
[2025-11-24 08:36:54] apptainer version 1.4.4-1.el9
[2025-11-24 08:36:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:36:55] c-210-35-2.aglt2.org
[2025-11-24 08:36:55] apptainer works
[2025-11-24 08:36:55] Set ATHENA_PROC_NUMBER=8
[2025-11-24 08:36:55] Set ATHENA_CORE_NUMBER=8
[2025-11-24 08:36:55] Starting ATLAS job with PandaID=6895335445
[2025-11-24 08:36:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:07 (2422736): BOINC client no longer exists - exiting
00:20:07 (2422736): timer handler: client dead, exiting
00:27:26 (172065): wrapper (7.7.26015): starting
00:27:26 (172065): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:27:26] Arguments: --nthreads 9
[2025-11-25 00:27:26] Threads: 9
[2025-11-25 00:27:26] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:27:26] Checking for CVMFS
[2025-11-25 00:27:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:27:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:27:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:27:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:27:27] 2.13.2.0 6122 33258 370484 153272 3 92 29074093 40960000 13235 16776704 0 66848039 99.594 74240985 40391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:27:27] CVMFS is ok
[2025-11-25 00:27:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:27:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:27:27] Further information can be found at the LHC@home message board.
[2025-11-25 00:27:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:27:27] Checking for apptainer binary...
[2025-11-25 00:27:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:27:27] Running /usr/bin/apptainer --version
[2025-11-25 00:27:27] apptainer version 1.4.4-1.el9
[2025-11-25 00:27:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:27:28] c-210-35-2.aglt2.org
[2025-11-25 00:27:28] apptainer works
[2025-11-25 00:27:28] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:27:28] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:27:28] Starting ATLAS job with PandaID=6895335445
[2025-11-25 00:27:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:30:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:30:40] 2025-11-26 14:29:38,953 | INFO     | monitor loop #7506: job 0:6895335445 is in state 'finished'
[2025-11-26 09:30:40] 2025-11-26 14:29:38,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:30:40] 2025-11-26 14:29:39,412 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 09:30:40] 2025-11-26 14:29:39,415 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2976.826589285715
[2025-11-26 09:30:40] 2025-11-26 14:29:39,456 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895335445/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:30:40] 2025-11-26 14:29:39,457 | INFO     | extracted standard info from prmon json
[2025-11-26 09:30:40] 2025-11-26 14:29:39,457 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:30:40] 2025-11-26 14:29:39,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:30:40] 2025-11-26 14:29:39,507 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:30:40] 2025-11-26 14:29:39,514 | INFO     | sum of square deviations: 2292329666932.0415
[2025-11-26 09:30:40] 2025-11-26 14:29:39,552 | INFO     | time since job start (118904s) is within the limit (172800.0s)
[2025-11-26 09:30:40] 2025-11-26 14:29:39,633 | INFO     | sum of deviations: 12287685918072.387
[2025-11-26 09:30:40] 2025-11-26 14:29:39,633 | INFO     | mean x: 1764107923.3064682
[2025-11-26 09:30:40] 2025-11-26 14:29:39,634 | INFO     | mean y: 3021764.1735112937
[2025-11-26 09:30:40] 2025-11-26 14:29:39,634 | INFO     | intersect: -9453211516.698408
[2025-11-26 09:30:40] 2025-11-26 14:29:39,640 | INFO     | chi2: 10.835862072748293
[2025-11-26 09:30:40] 2025-11-26 14:29:39,642 | INFO     | sum of square deviations: 2274726364611.181
[2025-11-26 09:30:40] 2025-11-26 14:29:39,762 | INFO     | sum of deviations: 12981309118802.926
[2025-11-26 09:30:40] 2025-11-26 14:29:39,762 | INFO     | mean x: 1764107770.8131754
[2025-11-26 09:30:40] 2025-11-26 14:29:39,762 | INFO     | mean y: 3027773.39372105
[2025-11-26 09:30:40] 2025-11-26 14:29:39,766 | INFO     | intersect: -10064305444.38544
[2025-11-26 09:30:40] 2025-11-26 14:29:39,769 | INFO     | chi2: 7.553138243846171
[2025-11-26 09:30:40] 2025-11-26 14:29:39,769 | INFO     | current chi2=7.553138243846171 (change=30.294994591690354 %)
[2025-11-26 09:30:40] 2025-11-26 14:29:39,775 | INFO     | sum of square deviations: 2257213081004.564
[2025-11-26 09:30:40] 2025-11-26 14:29:39,895 | INFO     | sum of deviations: 13594228950216.682
[2025-11-26 09:30:40] 2025-11-26 14:29:39,895 | INFO     | mean x: 1764107618.3183694
[2025-11-26 09:30:40] 2025-11-26 14:29:39,895 | INFO     | mean y: 3033108.4721362228
[2025-11-26 09:30:40] 2025-11-26 14:29:39,895 | INFO     | intersect: -10621432547.011494
[2025-11-26 09:30:40] 2025-11-26 14:29:39,904 | INFO     | chi2: 4.744029813819142
[2025-11-26 09:30:40] 2025-11-26 14:29:39,904 | INFO     | current chi2=4.744029813819142 (change=37.191275193668226 %)
[2025-11-26 09:30:40] 2025-11-26 14:29:39,906 | INFO     | sum of square deviations: 2239789347552.07
[2025-11-26 09:30:40] 2025-11-26 14:29:40,037 | INFO     | sum of deviations: 13912453028485.865
[2025-11-26 09:30:40] 2025-11-26 14:29:40,037 | INFO     | mean x: 1764107465.8210037
[2025-11-26 09:30:40] 2025-11-26 14:29:40,037 | INFO     | mean y: 3035892.9446456283
[2025-11-26 09:30:40] 2025-11-26 14:29:40,038 | INFO     | intersect: -10954718809.415987
[2025-11-26 09:30:40] 2025-11-26 14:29:40,039 | INFO     | chi2: 3.8126056469734726
[2025-11-26 09:30:40] 2025-11-26 14:29:40,040 | INFO     | current chi2=3.8126056469734726 (change=19.633606941770758 %)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,040 | INFO     | right removable region: 1932
[2025-11-26 09:30:40] 2025-11-26 14:29:40,046 | INFO     | sum of square deviations: 2274723148442.531
[2025-11-26 09:30:40] 2025-11-26 14:29:40,160 | INFO     | sum of deviations: 11613177479474.293
[2025-11-26 09:30:40] 2025-11-26 14:29:40,165 | INFO     | mean x: 1764108075.8136902
[2025-11-26 09:30:40] 2025-11-26 14:29:40,165 | INFO     | mean y: 3027605.0864642304
[2025-11-26 09:30:40] 2025-11-26 14:29:40,165 | INFO     | intersect: -9003299248.98602
[2025-11-26 09:30:40] 2025-11-26 14:29:40,167 | INFO     | chi2: 8.12929068264446
[2025-11-26 09:30:40] 2025-11-26 14:29:40,167 | INFO     | current chi2=8.12929068264446 (change=24.97790551349615 %)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,167 | INFO     | left removable region: 10
[2025-11-26 09:30:40] 2025-11-26 14:29:40,173 | INFO     | sum of square deviations: 2201769670913.5522
[2025-11-26 09:30:40] 2025-11-26 14:29:40,293 | INFO     | sum of deviations: 13077000711460.746
[2025-11-26 09:30:40] 2025-11-26 14:29:40,293 | INFO     | mean x: 1764107740.334027
[2025-11-26 09:30:40] 2025-11-26 14:29:40,294 | INFO     | mean y: 3043979.707596254
[2025-11-26 09:30:40] 2025-11-26 14:29:40,294 | INFO     | intersect: -10474545243.269417
[2025-11-26 09:30:40] 2025-11-26 14:29:40,295 | INFO     | chi2: 0.9034904785710007
[2025-11-26 09:30:40] 2025-11-26 14:29:40,296 | INFO     | current memory leak: 5.94 B/s (using 1922 data points, chi2=0.90)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | could have reported an average CPU frequency of 2920 MHz (68 samples)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | ..............................
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . Timing measurements:
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . get job = 0 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . initial setup = 3 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . payload setup = 17 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . stage-in = 0 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . payload execution = 118829 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . stage-out = 4 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | . log creation = 1 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,302 | INFO     | ..............................
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | 
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | job summary report
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | --------------------------------------------------
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | PanDA job id: 6895335445
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | task id: 47556137
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | errors: (none)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | pilot state: finished 
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | transexitcode: 0
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | exeerrorcode: 0
[2025-11-26 09:30:40] 2025-11-26 14:29:40,473 | INFO     | exeerrordiag: 
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | exitcode: 0
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | exitmsg: OK
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | cpuconsumptiontime: 241135 s
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | nevents: 1000
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | neventsw: 0
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | pid: 222139
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | pgrp: 222139
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | corecount: 9
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | event service: False
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | sizes: {0: 2284083, 1: 2284167, 2: 2284366, 13: 2284684, 118851: 2366334, 118855: 2375333, 118858: 2375517, 118880: 2375763}
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | --------------------------------------------------
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | 
[2025-11-26 09:30:40] 2025-11-26 14:29:40,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 09:30:40] 2025-11-26 14:29:40,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:30:40] 2025-11-26 14:29:40,590 | INFO     | job 6895335445 has completed (purged errors)
[2025-11-26 09:30:40] 2025-11-26 14:29:40,591 | INFO     | overall cleanup function is called
[2025-11-26 09:30:40] 2025-11-26 14:29:41,619 | INFO     | --- collectZombieJob: --- 10, [222139]
[2025-11-26 09:30:40] 2025-11-26 14:29:41,620 | INFO     | zombie collector waiting for pid 222139
[2025-11-26 09:30:40] 2025-11-26 14:29:41,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:30:40] 2025-11-26 14:29:41,620 | INFO     | collected zombie processes
[2025-11-26 09:30:40] 2025-11-26 14:29:41,620 | INFO     | will attempt to kill all subprocesses of pid=222139
[2025-11-26 09:30:40] 2025-11-26 14:29:42,148 | INFO     | process IDs to be killed: [222139] (in reverse order)
[2025-11-26 09:30:40] 2025-11-26 14:29:42,257 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:30:40] 2025-11-26 14:29:42,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:30:40] 2025-11-26 14:29:42,268 | INFO     | did not find any defunct processes belonging to 222139
[2025-11-26 09:30:40] 2025-11-26 14:29:42,278 | INFO     | did not find any defunct processes belonging to 222139
[2025-11-26 09:30:40] 2025-11-26 14:29:42,284 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:30:40] 2025-11-26 14:29:42,284 | INFO     | ready for new job
[2025-11-26 09:30:40] 2025-11-26 14:29:42,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:30:40] 2025-11-26 14:29:42,293 | INFO     | ***************************************
[2025-11-26 09:30:40] 2025-11-26 14:29:42,293 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:30:40] 2025-11-26 14:29:42,293 | INFO     | ***************************************
[2025-11-26 09:30:40] 2025-11-26 14:29:42,293 | INFO     | 
[2025-11-26 09:30:40] 2025-11-26 14:29:42,296 | INFO     | architecture information:
[2025-11-26 09:30:40] 2025-11-26 14:29:42,297 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:30:40] 2025-11-26 14:29:42,317 | INFO     | cat /etc/os-release:
[2025-11-26 09:30:40] NAME="CentOS Linux"
[2025-11-26 09:30:40] VERSION="7 (Core)"
[2025-11-26 09:30:40] ID="centos"
[2025-11-26 09:30:40] ID_LIKE="rhel fedora"
[2025-11-26 09:30:40] VERSION_ID="7"
[2025-11-26 09:30:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:30:40] ANSI_COLOR="0;31"
[2025-11-26 09:30:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:30:40] HOME_URL="https://www.centos.org/"
[2025-11-26 09:30:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:30:40] 
[2025-11-26 09:30:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:30:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:30:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:30:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:30:40] 
[2025-11-26 09:30:40] 2025-11-26 14:29:42,318 | INFO     | ***************************************
[2025-11-26 09:30:40] 2025-11-26 14:29:42,823 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 09:30:40] 2025-11-26 14:29:42,851 | INFO     | sufficient remaining disk space (64821919744 B)
[2025-11-26 09:30:40] 2025-11-26 14:29:42,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:30:40] 2025-11-26 14:29:42,851 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:30:40] 2025-11-26 14:29:42,851 | INFO     | update_server=False
[2025-11-26 09:30:40] 2025-11-26 14:29:42,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:30:40] 2025-11-26 14:29:42,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:30:40] 2025-11-26 14:29:42,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:30:40] 2025-11-26 14:29:42,853 | INFO     | aborting loop
[2025-11-26 09:30:40] 2025-11-26 14:29:42,977 | INFO     | all job control threads have been joined
[2025-11-26 09:30:40] 2025-11-26 14:29:43,026 | INFO     | all data control threads have been joined
[2025-11-26 09:30:40] 2025-11-26 14:29:43,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:30:40] 2025-11-26 14:29:43,858 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:43,859 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:43,984 | INFO     | [job] control thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:44,032 | INFO     | [data] control thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:44,050 | INFO     | all payload control threads have been joined
[2025-11-26 09:30:40] 2025-11-26 14:29:44,091 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:44,167 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:44,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,056 | INFO     | [payload] control thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,081 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,188 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,188 | INFO     | [job] validate thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,203 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,243 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:45,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:30:40] 2025-11-26 14:29:45,734 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:46,501 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:29:46,862 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:30:40] 2025-11-26 14:30:13,130 | INFO     | PID=190592 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 09:30:40] 2025-11-26 14:30:13,130 | INFO     | .. there are 20 such processes running
[2025-11-26 09:30:40] 2025-11-26 14:30:13,131 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:30:40] 2025-11-26 14:30:13,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:30:40] 2025-11-26 14:30:13,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:30:40] 2025-11-26 14:30:25,914 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:30:40] 2025-11-26 14:30:26,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726107813696)>', '<ExcThread(monitor, started 139724941420288)>']
[2025-11-26 09:30:40] 2025-11-26 14:30:26,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:30:40] 2025-11-26 14:30:26,215 | INFO     | [monitor] control thread has ended
[2025-11-26 09:30:40] 2025-11-26 14:30:31,067 | INFO     | all workflow threads have been joined
[2025-11-26 09:30:40] 2025-11-26 14:30:31,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:30:40] 2025-11-26 14:30:31,067 | INFO     | traces error code: 0
[2025-11-26 09:30:40] 2025-11-26 14:30:31,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:30:40] 2025-11-26 14:30:31,294 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:30:40] 2025-11-26 14:30:31,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:30:40] 2025-11-26 14:30:31,305 [wrapper] pilotpid: 190592
[2025-11-26 09:30:40] 2025-11-26 14:30:31,313 [wrapper] Pilot exit status: 0
[2025-11-26 09:30:40] 2025-11-26 14:30:31,381 [wrapper] pandaids: 6895335445 6895335445 6895335445
[2025-11-26 09:30:40] 2025-11-26 14:30:31,462 [wrapper] cleanup supervisor_pilot  843687 190593
[2025-11-26 09:30:40] 2025-11-26 14:30:31,472 [wrapper] Test setup, not cleaning
[2025-11-26 09:30:40] 2025-11-26 14:30:31,482 [wrapper] apfmon messages muted
[2025-11-26 09:30:40] 2025-11-26 14:30:31,487 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:30:40] 2025-11-26 14:30:31,498 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:30:40]  *** Error codes and diagnostics ***
[2025-11-26 09:30:40]     "exeErrorCode": 0,
[2025-11-26 09:30:40]     "exeErrorDiag": "",
[2025-11-26 09:30:40]     "pilotErrorCode": 0,
[2025-11-26 09:30:40]     "pilotErrorDiag": "",
[2025-11-26 09:30:40]  *** Listing of results directory ***
[2025-11-26 09:30:40] total 1741456
[2025-11-26 09:30:40] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 23:34 pilot3.tar.gz
[2025-11-26 09:30:40] -rwx------. 1 boincer umatlas     36292 Nov 21 23:44 runpilot2-wrapper.sh
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 23:44 queuedata.json
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas       100 Nov 23 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:30:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 10:12 run_atlas
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas       105 Nov 23 10:12 job.xml
[2025-11-26 09:30:40] -rw-r--r--. 3 boincer umatlas 409211244 Nov 23 10:12 EVNT.47483658._000256.pool.root.1
[2025-11-26 09:30:40] -rw-r--r--. 3 boincer umatlas 409211244 Nov 23 10:12 ATLAS.root_0
[2025-11-26 09:30:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 10:12 shared
[2025-11-26 09:30:40] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 10:12 input.tar.gz
[2025-11-26 09:30:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 10:12 start_atlas.sh
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas         0 Nov 23 10:12 boinc_lockfile
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:27 pandaJob.out
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas        57 Nov 25 00:27 setup.sh.local
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas    991801 Nov 25 00:27 agis_schedconf.cvmfs.json
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas       534 Nov 26 09:08 boinc_task_state.xml
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 09:22 init_data.xml
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas 924142130 Nov 26 09:28 HITS.47556137._002529.pool.root.1
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas      1071 Nov 26 09:29 memory_monitor_summary.json
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas   1516240 Nov 26 09:29 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas   2961347 Nov 26 09:29 log.47556137._002529.job.log.tgz.1
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas      8644 Nov 26 09:29 heartbeat.json
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas        97 Nov 26 09:30 pilot_heartbeat.json
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas      4823 Nov 26 09:30 pilotlog.txt
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas  15415399 Nov 26 09:30 log.47556137._002529.job.log.1
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas       353 Nov 26 09:30 output.list
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas       620 Nov 26 09:30 runtime_log
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas  18401280 Nov 26 09:30 result.tar.gz
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas      9439 Nov 26 09:30 runtime_log.err
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas       919 Nov 26 09:30 OszKDmoeug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmywJKDmdHRStn.diag
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas        30 Nov 26 09:30 wrapper_checkpoint.txt
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 09:30 boinc_mmap_file
[2025-11-26 09:30:40] -rw-r--r--. 1 boincer umatlas     25901 Nov 26 09:30 stderr.txt
[2025-11-26 09:30:40] HITS file was successfully produced:
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas 924142130 Nov 26 09:28 shared/HITS.pool.root.1
[2025-11-26 09:30:40]  *** Contents of shared directory: ***
[2025-11-26 09:30:40] total 1320680
[2025-11-26 09:30:40] -rw-r--r--. 3 boincer umatlas 409211244 Nov 23 10:12 ATLAS.root_0
[2025-11-26 09:30:40] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 10:12 input.tar.gz
[2025-11-26 09:30:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 10:12 start_atlas.sh
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas 924142130 Nov 26 09:28 HITS.pool.root.1
[2025-11-26 09:30:40] -rw-------. 1 boincer umatlas  18401280 Nov 26 09:30 result.tar.gz
09:31:02 (172065): run_atlas exited; CPU time 243331.716550
09:31:02 (172065): called boinc_finish(0)

</stderr_txt>
]]>

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