Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:15:02 (3197171): wrapper (7.7.26015): starting
00:15:02 (3197171): wrapper: running run_atlas (--nthreads 10)
[2025-11-24 00:15:02] Arguments: --nthreads 10
[2025-11-24 00:15:02] Threads: 10
[2025-11-24 00:15:02] Checking for CVMFS
[2025-11-24 00:15:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:15:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:15:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:15:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:15:26] 2.13.2.0 5784 29563 188060 153235 2 64 30482720 39288832 8705 16776704 0 18595570 99.697 15227639 37935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:15:26] CVMFS is ok
[2025-11-24 00:15:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:15:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:15:26] Further information can be found at the LHC@home message board.
[2025-11-24 00:15:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:15:26] Checking for apptainer binary...
[2025-11-24 00:15:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:15:26] Running /usr/bin/apptainer --version
[2025-11-24 00:15:27] apptainer version 1.4.4-1.el9
[2025-11-24 00:15:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:15:28] c-210-12.aglt2.org
[2025-11-24 00:15:28] apptainer works
[2025-11-24 00:15:28] Set ATHENA_PROC_NUMBER=10
[2025-11-24 00:15:28] Set ATHENA_CORE_NUMBER=10
[2025-11-24 00:15:29] Starting ATLAS job with PandaID=6894286221
[2025-11-24 00:15:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:56:58]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:56:58] 2025-11-25 23:55:59,591 | INFO     | monitor loop #8746: job 0:6894286221 is in state 'finished'
[2025-11-25 18:56:58] 2025-11-25 23:55:59,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:56:58] 2025-11-25 23:55:59,636 | INFO     | time since job start (153491s) is within the limit (172800.0s)
[2025-11-25 18:56:58] 2025-11-25 23:56:01,643 | INFO     | time since job start (153493s) is within the limit (172800.0s)
[2025-11-25 18:56:58] 2025-11-25 23:56:02,101 | INFO     | monitor loop #8747: job 0:6894286221 is in state 'finished'
[2025-11-25 18:56:58] 2025-11-25 23:56:02,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:56:58] 2025-11-25 23:56:03,652 | INFO     | time since job start (153495s) is within the limit (172800.0s)
[2025-11-25 18:56:58] 2025-11-25 23:56:04,606 | INFO     | monitor loop #8748: job 0:6894286221 is in state 'finished'
[2025-11-25 18:56:58] 2025-11-25 23:56:04,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:56:58] 2025-11-25 23:56:05,450 | INFO     | PID=3203468 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:56:58] 2025-11-25 23:56:05,450 | INFO     | .. there are 8 such processes running
[2025-11-25 18:56:58] 2025-11-25 23:56:06,453 | INFO     | time since job start (153498s) is within the limit (172800.0s)
[2025-11-25 18:56:58] 2025-11-25 23:56:07,118 | INFO     | monitor loop #8749: job 0:6894286221 is in state 'finished'
[2025-11-25 18:56:58] 2025-11-25 23:56:07,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:56:58] 2025-11-25 23:56:07,816 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 18:56:58] 2025-11-25 23:56:07,822 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.20855
[2025-11-25 18:56:58] 2025-11-25 23:56:07,829 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894286221/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:56:58] 2025-11-25 23:56:07,830 | INFO     | extracted standard info from prmon json
[2025-11-25 18:56:58] 2025-11-25 23:56:07,830 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:56:58] 2025-11-25 23:56:07,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:56:58] 2025-11-25 23:56:07,876 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:56:58] 2025-11-25 23:56:07,879 | INFO     | sum of square deviations: 4914766248671.913
[2025-11-25 18:56:58] 2025-11-25 23:56:08,116 | INFO     | sum of deviations: 17586533582521.12
[2025-11-25 18:56:58] 2025-11-25 23:56:08,117 | INFO     | mean x: 1764038324.5748408
[2025-11-25 18:56:58] 2025-11-25 23:56:08,117 | INFO     | mean y: 3220211.001990446
[2025-11-25 18:56:58] 2025-11-25 23:56:08,117 | INFO     | intersect: -6309047283.789439
[2025-11-25 18:56:58] 2025-11-25 23:56:08,120 | INFO     | chi2: 32.188608180212945
[2025-11-25 18:56:58] 2025-11-25 23:56:08,123 | INFO     | sum of square deviations: 4885481526249.343
[2025-11-25 18:56:58] 2025-11-25 23:56:08,382 | INFO     | sum of deviations: 18692376171711.414
[2025-11-25 18:56:58] 2025-11-25 23:56:08,382 | INFO     | mean x: 1764038172.0929399
[2025-11-25 18:56:58] 2025-11-25 23:56:08,382 | INFO     | mean y: 3225968.586358197
[2025-11-25 18:56:58] 2025-11-25 23:56:08,382 | INFO     | intersect: -6746173229.190183
[2025-11-25 18:56:58] 2025-11-25 23:56:08,386 | INFO     | chi2: 27.96902961623981
[2025-11-25 18:56:58] 2025-11-25 23:56:08,386 | INFO     | current chi2=27.96902961623981 (change=13.108918970180902 %)
[2025-11-25 18:56:58] 2025-11-25 23:56:08,386 | INFO     | right removable region: 2506
[2025-11-25 18:56:58] 2025-11-25 23:56:08,390 | INFO     | sum of square deviations: 4885467620689.341
[2025-11-25 18:56:58] 2025-11-25 23:56:08,471 | INFO     | time since job start (153500s) is within the limit (172800.0s)
[2025-11-25 18:56:58] 2025-11-25 23:56:08,646 | INFO     | sum of deviations: 16384349991225.074
[2025-11-25 18:56:58] 2025-11-25 23:56:08,646 | INFO     | mean x: 1764038477.0929399
[2025-11-25 18:56:58] 2025-11-25 23:56:08,646 | INFO     | mean y: 3226468.965297168
[2025-11-25 18:56:58] 2025-11-25 23:56:08,646 | INFO     | intersect: -5912813928.944501
[2025-11-25 18:56:58] 2025-11-25 23:56:08,650 | INFO     | chi2: 27.37414911913857
[2025-11-25 18:56:58] 2025-11-25 23:56:08,650 | INFO     | current chi2=27.37414911913857 (change=14.957027760007133 %)
[2025-11-25 18:56:58] 2025-11-25 23:56:08,651 | INFO     | left removable region: 10
[2025-11-25 18:56:58] 2025-11-25 23:56:08,654 | INFO     | sum of square deviations: 4821437606992.098
[2025-11-25 18:56:58] 2025-11-25 23:56:09,060 | INFO     | sum of deviations: 16591612634397.826
[2025-11-25 18:56:58] 2025-11-25 23:56:09,060 | INFO     | mean x: 1764038446.6326122
[2025-11-25 18:56:58] 2025-11-25 23:56:09,060 | INFO     | mean y: 3238839.7119391025
[2025-11-25 18:56:58] 2025-11-25 23:56:09,060 | INFO     | intersect: -6067200096.647635
[2025-11-25 18:56:58] 2025-11-25 23:56:09,063 | INFO     | chi2: 18.785638508409658
[2025-11-25 18:56:58] 2025-11-25 23:56:09,063 | INFO     | current memory leak: 3.44 B/s (using 2496 data points, chi2=18.79)
[2025-11-25 18:56:58] 2025-11-25 23:56:09,075 | INFO     | could have reported an average CPU frequency of 2600 MHz (86 samples)
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | ..............................
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . Timing measurements:
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . get job = 0 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . initial setup = 8 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . payload setup = 75 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . stage-in = 1 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . payload execution = 153245 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . stage-out = 7 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | . log creation = 2 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,076 | INFO     | ..............................
[2025-11-25 18:56:58] 2025-11-25 23:56:09,361 | INFO     | 
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | job summary report
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | --------------------------------------------------
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | PanDA job id: 6894286221
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | task id: 47533967
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | errors: (none)
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | pilot state: finished 
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | transexitcode: 0
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | exeerrorcode: 0
[2025-11-25 18:56:58] 2025-11-25 23:56:09,362 | INFO     | exeerrordiag: 
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | exitcode: 0
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | exitmsg: OK
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | cpuconsumptiontime: 305389 s
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | nevents: 1000
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | neventsw: 0
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | pid: 3214779
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | pgrp: 3214779
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | corecount: 10
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | event service: False
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | sizes: {0: 2298636, 2: 2298807, 4: 2298835, 8: 2298863, 20: 2298891, 32: 2298919, 44: 2299075, 56: 2299305, 58: 2299393, 68: 2299421, 153324: 2394810, 153325: 2395
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | --------------------------------------------------
[2025-11-25 18:56:58] 2025-11-25 23:56:09,363 | INFO     | 
[2025-11-25 18:56:58] 2025-11-25 23:56:09,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 18:56:58] 2025-11-25 23:56:09,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:56:58] 2025-11-25 23:56:09,474 | INFO     | job 6894286221 has completed (purged errors)
[2025-11-25 18:56:58] 2025-11-25 23:56:09,475 | INFO     | overall cleanup function is called
[2025-11-25 18:56:58] 2025-11-25 23:56:10,509 | INFO     | --- collectZombieJob: --- 10, [3214779]
[2025-11-25 18:56:58] 2025-11-25 23:56:10,509 | INFO     | zombie collector waiting for pid 3214779
[2025-11-25 18:56:58] 2025-11-25 23:56:10,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:56:58] 2025-11-25 23:56:10,509 | INFO     | collected zombie processes
[2025-11-25 18:56:58] 2025-11-25 23:56:10,509 | INFO     | will attempt to kill all subprocesses of pid=3214779
[2025-11-25 18:56:58] 2025-11-25 23:56:10,763 | INFO     | process IDs to be killed: [3214779] (in reverse order)
[2025-11-25 18:56:58] 2025-11-25 23:56:10,981 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:56:58] 2025-11-25 23:56:10,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:56:58] 2025-11-25 23:56:10,997 | INFO     | did not find any defunct processes belonging to 3214779
[2025-11-25 18:56:58] 2025-11-25 23:56:11,014 | INFO     | did not find any defunct processes belonging to 3214779
[2025-11-25 18:56:58] 2025-11-25 23:56:11,019 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:56:58] 2025-11-25 23:56:11,019 | INFO     | ready for new job
[2025-11-25 18:56:58] 2025-11-25 23:56:11,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:56:58] 2025-11-25 23:56:11,032 | INFO     | ***************************************
[2025-11-25 18:56:58] 2025-11-25 23:56:11,032 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:56:58] 2025-11-25 23:56:11,032 | INFO     | ***************************************
[2025-11-25 18:56:58] 2025-11-25 23:56:11,032 | INFO     | 
[2025-11-25 18:56:58] 2025-11-25 23:56:11,034 | INFO     | architecture information:
[2025-11-25 18:56:58] 2025-11-25 23:56:11,035 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:56:58] 2025-11-25 23:56:11,139 | INFO     | cat /etc/os-release:
[2025-11-25 18:56:58] NAME="CentOS Linux"
[2025-11-25 18:56:58] VERSION="7 (Core)"
[2025-11-25 18:56:58] ID="centos"
[2025-11-25 18:56:58] ID_LIKE="rhel fedora"
[2025-11-25 18:56:58] VERSION_ID="7"
[2025-11-25 18:56:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:56:58] ANSI_COLOR="0;31"
[2025-11-25 18:56:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:56:58] HOME_URL="https://www.centos.org/"
[2025-11-25 18:56:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:56:58] 
[2025-11-25 18:56:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:56:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:56:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:56:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:56:58] 
[2025-11-25 18:56:58] 2025-11-25 23:56:11,140 | INFO     | ***************************************
[2025-11-25 18:56:58] 2025-11-25 23:56:11,642 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 18:56:58] 2025-11-25 23:56:11,679 | INFO     | sufficient remaining disk space (50216304640 B)
[2025-11-25 18:56:58] 2025-11-25 23:56:11,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:56:58] 2025-11-25 23:56:11,680 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:56:58] 2025-11-25 23:56:11,680 | INFO     | update_server=False
[2025-11-25 18:56:58] 2025-11-25 23:56:11,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:56:58] 2025-11-25 23:56:11,756 | INFO     | all payload control threads have been joined
[2025-11-25 18:56:58] 2025-11-25 23:56:12,172 | INFO     | all data control threads have been joined
[2025-11-25 18:56:58] 2025-11-25 23:56:12,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 18:56:58] 2025-11-25 23:56:12,174 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 18:56:58] 2025-11-25 23:56:12,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:56:58] 2025-11-25 23:56:12,174 | INFO     | will abort loop
[2025-11-25 18:56:58] 2025-11-25 23:56:12,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:56:58] 2025-11-25 23:56:12,475 | INFO     | all job control threads have been joined
[2025-11-25 18:56:58] 2025-11-25 23:56:12,686 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:12,719 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:12,762 | INFO     | [payload] control thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,178 | INFO     | [data] control thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,180 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,481 | INFO     | [job] control thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,541 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,969 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:13,970 | INFO     | [job] validate thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:14,016 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:14,132 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:14,203 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:14,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:56:58] 2025-11-25 23:56:14,453 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:14,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:56:58] 2025-11-25 23:56:15,383 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:18,662 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:56:58] 2025-11-25 23:56:41,890 | INFO     | PID=3203468 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:56:58] 2025-11-25 23:56:41,891 | INFO     | .. there are 8 such processes running
[2025-11-25 18:56:58] 2025-11-25 23:56:41,891 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:56:58] 2025-11-25 23:56:41,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:56:58] 2025-11-25 23:56:41,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:56:58] 2025-11-25 23:56:51,557 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:56:58] 2025-11-25 23:56:51,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230339356480)>', '<ExcThread(monitor, started 140229465859840)>']
[2025-11-25 18:56:58] 2025-11-25 23:56:51,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:56:58] 2025-11-25 23:56:51,957 | INFO     | [monitor] control thread has ended
[2025-11-25 18:56:58] 2025-11-25 23:56:56,938 | INFO     | all workflow threads have been joined
[2025-11-25 18:56:58] 2025-11-25 23:56:56,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:56:58] 2025-11-25 23:56:56,942 | INFO     | traces error code: 0
[2025-11-25 18:56:58] 2025-11-25 23:56:56,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:56:58] 2025-11-25 23:56:57,404 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:56:58] 2025-11-25 23:56:57,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:56:58] 2025-11-25 23:56:57,584 [wrapper] pilotpid: 3203468
[2025-11-25 18:56:58] 2025-11-25 23:56:57,656 [wrapper] Pilot exit status: 0
[2025-11-25 18:56:58] 2025-11-25 23:56:57,816 [wrapper] pandaids: 6894286221
[2025-11-25 18:56:58] 2025-11-25 23:56:57,889 [wrapper] cleanup supervisor_pilot 2511133 3203469
[2025-11-25 18:56:58] 2025-11-25 23:56:57,892 [wrapper] Test setup, not cleaning
[2025-11-25 18:56:58] 2025-11-25 23:56:57,895 [wrapper] apfmon messages muted
[2025-11-25 18:56:58] 2025-11-25 23:56:57,898 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:56:58] 2025-11-25 23:56:57,900 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:56:58]  *** Error codes and diagnostics ***
[2025-11-25 18:56:58]     "exeErrorCode": 0,
[2025-11-25 18:56:58]     "exeErrorDiag": "",
[2025-11-25 18:56:58]     "pilotErrorCode": 0,
[2025-11-25 18:56:58]     "pilotErrorDiag": "",
[2025-11-25 18:56:58]  *** Listing of results directory ***
[2025-11-25 18:56:58] total 1342788
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:18 pilot3.tar.gz
[2025-11-25 18:56:58] -rwx------. 1 boincer umatlas     36292 Nov 21 05:19 runpilot2-wrapper.sh
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 05:19 queuedata.json
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:56:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:14 run_atlas
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:14 job.xml
[2025-11-25 18:56:58] -rw-r--r--. 2 boincer umatlas 410771570 Nov 24 00:15 EVNT.47493127._002367.pool.root.1
[2025-11-25 18:56:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:15 start_atlas.sh
[2025-11-25 18:56:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:15 shared
[2025-11-25 18:56:58] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:15 input.tar.gz
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:15 boinc_lockfile
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 00:15 pandaJob.out
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas        57 Nov 24 00:15 setup.sh.local
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas    989786 Nov 24 00:17 agis_schedconf.cvmfs.json
[2025-11-25 18:56:58] drwx------. 5 boincer umatlas      4096 Nov 24 00:17 pilot3
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas       534 Nov 25 18:19 boinc_task_state.xml
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas 915721442 Nov 25 18:51 HITS.47533967._003382.pool.root.1
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas      1076 Nov 25 18:55 memory_monitor_summary.json
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas   1516240 Nov 25 18:55 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas   3451218 Nov 25 18:55 log.47533967._003382.job.log.tgz.1
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas        95 Nov 25 18:55 pilot_heartbeat.json
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas      8684 Nov 25 18:56 heartbeat.json
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas      6663 Nov 25 18:56 init_data.xml
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas        30 Nov 25 18:56 wrapper_checkpoint.txt
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas      5009 Nov 25 18:56 pilotlog.txt
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas  18851995 Nov 25 18:56 log.47533967._003382.job.log.1
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 18:56 boinc_mmap_file
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas       353 Nov 25 18:56 output.list
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas       620 Nov 25 18:56 runtime_log
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas  22323200 Nov 25 18:56 result.tar.gz
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas       668 Nov 25 18:56 yzALDm8Pdg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmWHKDmMKoWEn.diag
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas      9346 Nov 25 18:56 runtime_log.err
[2025-11-25 18:56:58] -rw-r--r--. 1 boincer umatlas     21866 Nov 25 18:56 stderr.txt
[2025-11-25 18:56:58] HITS file was successfully produced:
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas 915721442 Nov 25 18:51 shared/HITS.pool.root.1
[2025-11-25 18:56:58]  *** Contents of shared directory: ***
[2025-11-25 18:56:58] total 1317808
[2025-11-25 18:56:58] -rw-r--r--. 2 boincer umatlas 410771570 Nov 24 00:15 ATLAS.root_0
[2025-11-25 18:56:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:15 start_atlas.sh
[2025-11-25 18:56:58] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:15 input.tar.gz
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas 915721442 Nov 25 18:51 HITS.pool.root.1
[2025-11-25 18:56:58] -rw-------. 1 boincer umatlas  22323200 Nov 25 18:56 result.tar.gz
18:56:59 (3197171): run_atlas exited; CPU time 307763.011289
18:56:59 (3197171): called boinc_finish(0)

</stderr_txt>
]]>

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