Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:06 (4027828): wrapper (7.7.26015): starting
00:06:06 (4027828): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:06:06] Arguments: --nthreads 8
[2025-11-23 00:06:06] Threads: 8
[2025-11-23 00:06:06] Checking for CVMFS
[2025-11-23 00:06:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:06:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:06:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:06:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:06:08] 2.13.2.0 6465 29077 404684 153197 1 143 21151498 40960000 16998 16776704 0 88059966 99.572 89527380 37760 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:06:08] CVMFS is ok
[2025-11-23 00:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:06:08] Further information can be found at the LHC@home message board.
[2025-11-23 00:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:06:08] Checking for apptainer binary...
[2025-11-23 00:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:06:08] Running /usr/bin/apptainer --version
[2025-11-23 00:06:08] apptainer version 1.4.4-1.el9
[2025-11-23 00:06:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:06:09] c-206-40.aglt2.org
[2025-11-23 00:06:09] apptainer works
[2025-11-23 00:06:09] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:06:09] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:06:09] Starting ATLAS job with PandaID=6893876375
[2025-11-23 00:06:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:58:36]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:58:36] 2025-11-24 23:18:30,220 | INFO     | time since job start (151859s) is within the limit (172800.0s)
[2025-11-24 19:58:36] 2025-11-24 23:18:31,258 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 19:58:36] 2025-11-24 23:18:31,262 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.1426718750004
[2025-11-24 19:58:36] 2025-11-24 23:18:31,272 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6893876375/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:58:36] 2025-11-24 23:18:31,273 | INFO     | extracted standard info from prmon json
[2025-11-24 19:58:36] 2025-11-24 23:18:31,273 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:58:36] 2025-11-24 23:18:31,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:58:36] 2025-11-24 23:18:31,304 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:58:36] 2025-11-24 23:18:31,307 | INFO     | sum of square deviations: 4775172175427.031
[2025-11-24 19:58:36] 2025-11-24 23:18:31,419 | INFO     | sum of deviations: 13384505702848.166
[2025-11-24 19:58:36] 2025-11-24 23:18:31,419 | INFO     | mean x: 1763950431.534566
[2025-11-24 19:58:36] 2025-11-24 23:18:31,419 | INFO     | mean y: 2841152.9051446947
[2025-11-24 19:58:36] 2025-11-24 23:18:31,420 | INFO     | intersect: -4941400382.910165
[2025-11-24 19:58:36] 2025-11-24 23:18:31,421 | INFO     | chi2: 7.816849179927569
[2025-11-24 19:58:36] 2025-11-24 23:18:31,424 | INFO     | sum of square deviations: 4746441153995.463
[2025-11-24 19:58:36] 2025-11-24 23:18:31,535 | INFO     | sum of deviations: 14276157291269.865
[2025-11-24 19:58:36] 2025-11-24 23:18:31,536 | INFO     | mean x: 1763950279.0426903
[2025-11-24 19:58:36] 2025-11-24 23:18:31,536 | INFO     | mean y: 2845885.5859846957
[2025-11-24 19:58:36] 2025-11-24 23:18:31,536 | INFO     | intersect: -5302693743.067102
[2025-11-24 19:58:36] 2025-11-24 23:18:31,538 | INFO     | chi2: 4.218240475300856
[2025-11-24 19:58:36] 2025-11-24 23:18:31,538 | INFO     | current chi2=4.218240475300856 (change=46.03656309331604 %)
[2025-11-24 19:58:36] 2025-11-24 23:18:31,540 | INFO     | sum of square deviations: 4717824564107.789
[2025-11-24 19:58:36] 2025-11-24 23:18:31,719 | INFO     | sum of deviations: 14532518411794.668
[2025-11-24 19:58:36] 2025-11-24 23:18:31,719 | INFO     | mean x: 1763950126.5480225
[2025-11-24 19:58:36] 2025-11-24 23:18:31,719 | INFO     | mean y: 2847250.9943502825
[2025-11-24 19:58:36] 2025-11-24 23:18:31,719 | INFO     | intersect: -5430724375.761246
[2025-11-24 19:58:36] 2025-11-24 23:18:31,721 | INFO     | chi2: 3.7341690115320865
[2025-11-24 19:58:36] 2025-11-24 23:18:31,721 | INFO     | current chi2=3.7341690115320865 (change=11.475672537001213 %)
[2025-11-24 19:58:36] 2025-11-24 23:18:31,722 | INFO     | right removable region: 2477
[2025-11-24 19:58:36] 2025-11-24 23:18:31,724 | INFO     | sum of square deviations: 4746435030815.469
[2025-11-24 19:58:36] 2025-11-24 23:18:31,837 | INFO     | sum of deviations: 12501159273206.775
[2025-11-24 19:58:36] 2025-11-24 23:18:31,837 | INFO     | mean x: 1763950584.0426903
[2025-11-24 19:58:36] 2025-11-24 23:18:31,837 | INFO     | mean y: 2845839.85098671
[2025-11-24 19:58:36] 2025-11-24 23:18:31,837 | INFO     | intersect: -4643046721.201346
[2025-11-24 19:58:36] 2025-11-24 23:18:31,839 | INFO     | chi2: 4.433665976439404
[2025-11-24 19:58:36] 2025-11-24 23:18:31,839 | INFO     | current chi2=4.433665976439404 (change=43.28065088137614 %)
[2025-11-24 19:58:36] 2025-11-24 23:18:31,841 | INFO     | sum of square deviations: 4717815345952.351
[2025-11-24 19:58:36] 2025-11-24 23:18:31,951 | INFO     | sum of deviations: 12285413483781.014
[2025-11-24 19:58:36] 2025-11-24 23:18:31,951 | INFO     | mean x: 1763950736.5456014
[2025-11-24 19:58:36] 2025-11-24 23:18:31,951 | INFO     | mean y: 2846989.437853107
[2025-11-24 19:58:36] 2025-11-24 23:18:31,952 | INFO     | intersect: -4590563853.1622715
[2025-11-24 19:58:36] 2025-11-24 23:18:31,953 | INFO     | chi2: 4.339459656352133
[2025-11-24 19:58:36] 2025-11-24 23:18:31,954 | INFO     | current chi2=4.339459656352133 (change=2.1247951602102084 %)
[2025-11-24 19:58:36] 2025-11-24 23:18:31,954 | INFO     | left removable region: 20
[2025-11-24 19:58:36] 2025-11-24 23:18:31,956 | INFO     | sum of square deviations: 4598883391823.613
[2025-11-24 19:58:36] 2025-11-24 23:18:32,064 | INFO     | sum of deviations: 13092050942532.787
[2025-11-24 19:58:36] 2025-11-24 23:18:32,064 | INFO     | mean x: 1763950706.0468051
[2025-11-24 19:58:36] 2025-11-24 23:18:32,065 | INFO     | mean y: 2855109.5934065934
[2025-11-24 19:58:36] 2025-11-24 23:18:32,065 | INFO     | intersect: -5018740468.311429
[2025-11-24 19:58:36] 2025-11-24 23:18:32,067 | INFO     | chi2: 0.12647167712221083
[2025-11-24 19:58:36] 2025-11-24 23:18:32,067 | INFO     | current memory leak: 2.85 B/s (using 2457 data points, chi2=0.13)
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | could have reported an average CPU frequency of 3254 MHz (86 samples)
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | ..............................
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . Timing measurements:
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . get job = 0 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . initial setup = 6 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . payload setup = 31 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . stage-in = 0 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . payload execution = 151732 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . stage-out = 5 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | . log creation = 1 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,068 | INFO     | ..............................
[2025-11-24 19:58:36] 2025-11-24 23:18:32,227 | INFO     | time since job start (151861s) is within the limit (172800.0s)
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | 
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | job summary report
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | --------------------------------------------------
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | PanDA job id: 6893876375
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | task id: 47523449
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | errors: (none)
[2025-11-24 19:58:36] 2025-11-24 23:18:32,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | pilot state: finished 
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | transexitcode: 0
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | exeerrorcode: 0
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | exeerrordiag: 
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | exitcode: 0
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | exitmsg: OK
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | cpuconsumptiontime: 201623 s
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | nevents: 1000
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | neventsw: 0
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | pid: 4077447
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | pgrp: 4077447
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | corecount: 8
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | event service: False
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | sizes: {0: 2298585, 1: 2298784, 12: 2298784, 23: 2298812, 34: 2298840, 37: 2299130, 44: 2299286, 151765: 2395161, 151771: 2404946, 151772: 2405002, 151790: 2405248
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | --------------------------------------------------
[2025-11-24 19:58:36] 2025-11-24 23:18:32,475 | INFO     | 
[2025-11-24 19:58:36] 2025-11-24 23:18:32,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-24 19:58:36] 2025-11-24 23:18:32,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,828 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:58:36] 2025-11-24 23:18:32,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:58:36] 2025-11-24 23:18:32,830 | INFO     | job 6893876375 has completed (purged errors)
[2025-11-24 19:58:36] 2025-11-24 23:18:32,830 | INFO     | overall cleanup function is called
[2025-11-24 19:58:36] 2025-11-24 23:18:33,970 | INFO     | --- collectZombieJob: --- 10, [4077447]
[2025-11-24 19:58:36] 2025-11-24 23:18:33,970 | INFO     | zombie collector waiting for pid 4077447
[2025-11-24 19:58:36] 2025-11-24 23:18:33,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:58:36] 2025-11-24 23:18:33,970 | INFO     | collected zombie processes
[2025-11-24 19:58:36] 2025-11-24 23:18:33,970 | INFO     | will attempt to kill all subprocesses of pid=4077447
[2025-11-24 19:58:36] 2025-11-24 23:18:34,911 | INFO     | process IDs to be killed: [4077447] (in reverse order)
[2025-11-24 19:58:36] 2025-11-24 23:18:35,148 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:58:36] 2025-11-24 23:18:35,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:58:36] 2025-11-24 23:18:35,162 | INFO     | did not find any defunct processes belonging to 4077447
[2025-11-24 19:58:36] 2025-11-24 23:18:35,174 | INFO     | did not find any defunct processes belonging to 4077447
[2025-11-24 19:58:36] 2025-11-24 23:18:35,176 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:58:36] 2025-11-24 23:18:35,176 | INFO     | ready for new job
[2025-11-24 19:58:36] 2025-11-24 23:18:35,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:58:36] 2025-11-24 23:18:35,186 | INFO     | ***************************************
[2025-11-24 19:58:36] 2025-11-24 23:18:35,186 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:58:36] 2025-11-24 23:18:35,186 | INFO     | ***************************************
[2025-11-24 19:58:36] 2025-11-24 23:18:35,186 | INFO     | 
[2025-11-24 19:58:36] 2025-11-24 23:18:35,189 | INFO     | architecture information:
[2025-11-24 19:58:36] 2025-11-24 23:18:35,190 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:58:36] 2025-11-24 23:18:35,223 | INFO     | cat /etc/os-release:
[2025-11-24 19:58:36] NAME="CentOS Linux"
[2025-11-24 19:58:36] VERSION="7 (Core)"
[2025-11-24 19:58:36] ID="centos"
[2025-11-24 19:58:36] ID_LIKE="rhel fedora"
[2025-11-24 19:58:36] VERSION_ID="7"
[2025-11-24 19:58:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:58:36] ANSI_COLOR="0;31"
[2025-11-24 19:58:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:58:36] HOME_URL="https://www.centos.org/"
[2025-11-24 19:58:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:58:36] 
[2025-11-24 19:58:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:58:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:58:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:58:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:58:36] 
[2025-11-24 19:58:36] 2025-11-24 23:18:35,223 | INFO     | ***************************************
[2025-11-24 19:58:36] 2025-11-24 23:18:35,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-24 19:58:36] 2025-11-24 23:18:35,878 | INFO     | sufficient remaining disk space (80956358656 B)
[2025-11-24 19:58:36] 2025-11-24 23:18:35,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:58:36] 2025-11-24 23:18:35,878 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:58:36] 2025-11-24 23:18:35,878 | INFO     | update_server=False
[2025-11-24 19:58:36] 2025-11-24 23:18:35,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:58:36] 2025-11-24 23:18:35,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:58:36] 2025-11-24 23:18:35,879 | INFO     | aborting loop
[2025-11-24 19:58:36] 2025-11-24 23:18:35,951 | INFO     | all job control threads have been joined
[2025-11-24 19:58:36] 2025-11-24 23:18:36,390 | INFO     | all payload control threads have been joined
[2025-11-24 19:58:36] 2025-11-24 23:18:36,424 | INFO     | all data control threads have been joined
[2025-11-24 19:58:36] 2025-11-24 23:18:36,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:58:36] 2025-11-24 23:18:36,884 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:36,891 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:36,957 | INFO     | [job] control thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,038 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:58:36] 2025-11-24 23:18:37,262 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,414 | INFO     | [job] validate thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,424 | INFO     | [payload] control thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,430 | INFO     | [data] control thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,496 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,497 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:37,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:58:36] 2025-11-24 23:18:38,048 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:38,180 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:38,505 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:38,701 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:41,738 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:18:46,396 | INFO     | job.realtimelogging is not enabled
[2025-11-24 19:58:36] 2025-11-24 23:18:47,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:58:36] 2025-11-24 23:19:05,741 | INFO     | PID=4043520 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:58:36] 2025-11-24 23:19:05,741 | INFO     | .. there are 18 such processes running
[2025-11-24 19:58:36] 2025-11-24 23:19:05,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:58:36] 2025-11-24 23:19:05,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:58:36] 2025-11-24 23:19:05,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:58:36] 2025-11-24 23:19:09,963 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:58:36] 2025-11-24 23:19:10,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791699273536)>', '<ExcThread(monitor, started 139791345624832)>']
[2025-11-24 19:58:36] 2025-11-24 23:19:11,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:58:36] 2025-11-24 23:19:11,782 | INFO     | [monitor] control thread has ended
[2025-11-24 19:58:36] 2025-11-24 23:19:15,996 | INFO     | all workflow threads have been joined
[2025-11-24 19:58:36] 2025-11-24 23:19:15,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:58:36] 2025-11-24 23:19:15,996 | INFO     | traces error code: 0
[2025-11-24 19:58:36] 2025-11-24 23:19:15,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:58:36] 2025-11-24 23:19:16,367 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:58:36] 2025-11-24 23:19:16,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:58:36] 2025-11-24 23:19:16,436 [wrapper] pilotpid: 4043520
[2025-11-24 19:58:36] 2025-11-24 23:19:16,448 [wrapper] Pilot exit status: 0
[2025-11-24 19:58:36] 2025-11-24 23:19:16,536 [wrapper] pandaids: 6893876375
[2025-11-24 19:58:36] 2025-11-24 23:19:17,596 [wrapper] cleanup supervisor_pilot 2225979 4043521
[2025-11-24 19:58:36] 2025-11-24 23:19:17,643 [wrapper] Test setup, not cleaning
[2025-11-24 19:58:36] 2025-11-24 23:19:17,650 [wrapper] apfmon messages muted
[2025-11-24 19:58:36] 2025-11-24 23:19:17,653 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:58:36] 2025-11-24 23:19:17,672 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:58:36]  *** Error codes and diagnostics ***
[2025-11-24 19:58:36]     "exeErrorCode": 0,
[2025-11-24 19:58:36]     "exeErrorDiag": "",
[2025-11-24 19:58:36]     "pilotErrorCode": 0,
[2025-11-24 19:58:36]     "pilotErrorDiag": "",
[2025-11-24 19:58:36]  *** Listing of results directory ***
[2025-11-24 19:58:36] total 1342220
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-24 19:58:36] -rwx------. 1 boincer umatlas     36292 Nov 20 11:53 runpilot2-wrapper.sh
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:53 queuedata.json
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:58:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:06 run_atlas
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:06 job.xml
[2025-11-24 19:58:36] -rw-r--r--. 2 boincer umatlas 409921954 Nov 23 00:06 EVNT.47493127._000751.pool.root.1
[2025-11-24 19:58:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:06 start_atlas.sh
[2025-11-24 19:58:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:06 shared
[2025-11-24 19:58:36] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 00:06 input.tar.gz
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:06 boinc_lockfile
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:06 pandaJob.out
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas        57 Nov 23 00:06 setup.sh.local
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas    989784 Nov 23 00:07 agis_schedconf.cvmfs.json
[2025-11-24 19:58:36] drwx------. 5 boincer umatlas      4096 Nov 23 00:07 pilot3
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas       533 Nov 24 18:04 boinc_task_state.xml
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas 915426551 Nov 24 18:17 HITS.47523449._007502.pool.root.1
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas      1075 Nov 24 18:18 memory_monitor_summary.json
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas   1516227 Nov 24 18:18 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas   3265743 Nov 24 18:18 log.47523449._007502.job.log.tgz.1
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas      8636 Nov 24 18:18 heartbeat.json
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas        95 Nov 24 18:19 pilot_heartbeat.json
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas      4896 Nov 24 18:19 pilotlog.txt
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas  19318635 Nov 24 18:19 log.47523449._007502.job.log.1
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas       353 Nov 24 18:19 output.list
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas       620 Nov 24 18:19 runtime_log
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas  22599680 Nov 24 18:19 result.tar.gz
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 18:19 runtime_log.err
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas       669 Nov 24 18:19 2cJODmn5Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxKIKDmigt1Qm.diag
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas      6903 Nov 24 19:58 init_data.xml
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:58 boinc_mmap_file
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:58 wrapper_checkpoint.txt
[2025-11-24 19:58:36] -rw-r--r--. 1 boincer umatlas     21345 Nov 24 19:58 stderr.txt
[2025-11-24 19:58:36] HITS file was successfully produced:
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas 915426551 Nov 24 18:17 shared/HITS.pool.root.1
[2025-11-24 19:58:36]  *** Contents of shared directory: ***
[2025-11-24 19:58:36] total 1316964
[2025-11-24 19:58:36] -rw-r--r--. 2 boincer umatlas 409921954 Nov 23 00:06 ATLAS.root_0
[2025-11-24 19:58:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:06 start_atlas.sh
[2025-11-24 19:58:36] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 00:06 input.tar.gz
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas 915426551 Nov 24 18:17 HITS.pool.root.1
[2025-11-24 19:58:36] -rw-------. 1 boincer umatlas  22599680 Nov 24 18:19 result.tar.gz
19:58:38 (4027828): run_atlas exited; CPU time 202399.407346
19:58:38 (4027828): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN