Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:23 (4174364): wrapper (7.7.26015): starting
00:10:23 (4174364): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:10:23] Arguments: --nthreads 8
[2025-11-23 00:10:23] Threads: 8
[2025-11-23 00:10:23] Checking for CVMFS
[2025-11-23 00:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:10:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:10:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:10:24] 2.13.3.0 7489 25292 377000 153197 3 637 28476576 32935937 18913 16776704 0 174409730 99.674 145750572 39992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:10:24] CVMFS is ok
[2025-11-23 00:10:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:10:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:10:24] Further information can be found at the LHC@home message board.
[2025-11-23 00:10:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:10:24] Checking for apptainer binary...
[2025-11-23 00:10:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:10:24] Running /usr/bin/apptainer --version
[2025-11-23 00:10:24] apptainer version 1.4.4-1.el9
[2025-11-23 00:10:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:10:25] c7-13-32.aglt2.org
[2025-11-23 00:10:25] apptainer works
[2025-11-23 00:10:25] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:10:25] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:10:25] Starting ATLAS job with PandaID=6893875914
[2025-11-23 00:10:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:29:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:29:57] 2025-11-24 17:28:14,668 | INFO     | monitor loop #8196: job 0:6893875914 is in state 'finished'
[2025-11-24 12:29:57] 2025-11-24 17:28:14,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:29:57] 2025-11-24 17:28:15,252 | INFO     | time since job start (130596s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:17,177 | INFO     | monitor loop #8197: job 0:6893875914 is in state 'finished'
[2025-11-24 12:29:57] 2025-11-24 17:28:17,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:29:57] 2025-11-24 17:28:17,259 | INFO     | time since job start (130598s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:19,286 | INFO     | time since job start (130600s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:19,684 | INFO     | monitor loop #8198: job 0:6893875914 is in state 'finished'
[2025-11-24 12:29:57] 2025-11-24 17:28:19,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:29:57] 2025-11-24 17:28:21,295 | INFO     | time since job start (130602s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:22,217 | INFO     | monitor loop #8199: job 0:6893875914 is in state 'finished'
[2025-11-24 12:29:57] 2025-11-24 17:28:22,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:29:57] 2025-11-24 17:28:23,302 | INFO     | time since job start (130604s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:24,722 | INFO     | monitor loop #8200: job 0:6893875914 is in state 'finished'
[2025-11-24 12:29:57] 2025-11-24 17:28:24,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:29:57] 2025-11-24 17:28:25,309 | INFO     | time since job start (130606s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:25,987 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 12:29:57] 2025-11-24 17:28:26,010 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.864515624999
[2025-11-24 12:29:57] 2025-11-24 17:28:26,056 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893875914/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:29:57] 2025-11-24 17:28:26,057 | INFO     | extracted standard info from prmon json
[2025-11-24 12:29:57] 2025-11-24 17:28:26,057 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:29:57] 2025-11-24 17:28:26,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:29:57] 2025-11-24 17:28:26,102 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:29:57] 2025-11-24 17:28:26,104 | INFO     | sum of square deviations: 3030504834424.599
[2025-11-24 12:29:57] 2025-11-24 17:28:26,188 | INFO     | sum of deviations: 1834081060976.4688
[2025-11-24 12:29:57] 2025-11-24 17:28:26,189 | INFO     | mean x: 1763940030.7464921
[2025-11-24 12:29:57] 2025-11-24 17:28:26,189 | INFO     | mean y: 2896848.196445276
[2025-11-24 12:29:57] 2025-11-24 17:28:26,189 | INFO     | intersect: -1064651029.0880532
[2025-11-24 12:29:57] 2025-11-24 17:28:26,191 | INFO     | chi2: 43.77714731346814
[2025-11-24 12:29:57] 2025-11-24 17:28:26,193 | INFO     | sum of square deviations: 3009294915561.8105
[2025-11-24 12:29:57] 2025-11-24 17:28:26,424 | INFO     | sum of deviations: 2518099931299.113
[2025-11-24 12:29:57] 2025-11-24 17:28:26,425 | INFO     | mean x: 1763939878.251758
[2025-11-24 12:29:57] 2025-11-24 17:28:26,425 | INFO     | mean y: 2901765.971870605
[2025-11-24 12:29:57] 2025-11-24 17:28:26,425 | INFO     | intersect: -1473117371.6912367
[2025-11-24 12:29:57] 2025-11-24 17:28:26,431 | INFO     | chi2: 40.65516624231583
[2025-11-24 12:29:57] 2025-11-24 17:28:26,432 | INFO     | current chi2=40.65516624231583 (change=7.131531547264222 %)
[2025-11-24 12:29:57] 2025-11-24 17:28:26,432 | INFO     | right removable region: 2132
[2025-11-24 12:29:57] 2025-11-24 17:28:26,434 | INFO     | sum of square deviations: 3009291985731.8027
[2025-11-24 12:29:57] 2025-11-24 17:28:26,641 | INFO     | sum of deviations: 1028951786137.167
[2025-11-24 12:29:57] 2025-11-24 17:28:26,641 | INFO     | mean x: 1763940183.251758
[2025-11-24 12:29:57] 2025-11-24 17:28:26,641 | INFO     | mean y: 2902635.755743085
[2025-11-24 12:29:57] 2025-11-24 17:28:26,642 | INFO     | intersect: -600232390.9554129
[2025-11-24 12:29:57] 2025-11-24 17:28:26,643 | INFO     | chi2: 40.33406225206419
[2025-11-24 12:29:57] 2025-11-24 17:28:26,644 | INFO     | current chi2=40.33406225206419 (change=7.86502838284457 %)
[2025-11-24 12:29:57] 2025-11-24 17:28:26,644 | INFO     | left removable region: 10
[2025-11-24 12:29:57] 2025-11-24 17:28:26,646 | INFO     | sum of square deviations: 2962976260370.8213
[2025-11-24 12:29:57] 2025-11-24 17:28:27,048 | INFO     | sum of deviations: 1600489506648.3774
[2025-11-24 12:29:57] 2025-11-24 17:28:27,048 | INFO     | mean x: 1763940152.762017
[2025-11-24 12:29:57] 2025-11-24 17:28:27,048 | INFO     | mean y: 2910339.220546654
[2025-11-24 12:29:57] 2025-11-24 17:28:27,048 | INFO     | intersect: -949904485.0528076
[2025-11-24 12:29:57] 2025-11-24 17:28:27,051 | INFO     | chi2: 36.249608877823704
[2025-11-24 12:29:57] 2025-11-24 17:28:27,051 | INFO     | current memory leak: 0.54 B/s (using 2122 data points, chi2=36.25)
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | could have reported an average CPU frequency of 3290 MHz (75 samples)
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | ..............................
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . Timing measurements:
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . get job = 0 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . initial setup = 4 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . payload setup = 45 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . stage-in = 0 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . payload execution = 130446 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . stage-out = 7 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | . log creation = 1 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,111 | INFO     | ..............................
[2025-11-24 12:29:57] 2025-11-24 17:28:27,401 | INFO     | time since job start (130608s) is within the limit (172800.0s)
[2025-11-24 12:29:57] 2025-11-24 17:28:27,493 | INFO     | 
[2025-11-24 12:29:57] 2025-11-24 17:28:27,493 | INFO     | job summary report
[2025-11-24 12:29:57] 2025-11-24 17:28:27,493 | INFO     | --------------------------------------------------
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | PanDA job id: 6893875914
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | task id: 47523449
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | errors: (none)
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | pilot state: finished 
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | transexitcode: 0
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | exeerrorcode: 0
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | exeerrordiag: 
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | exitcode: 0
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | exitmsg: OK
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | cpuconsumptiontime: 197943 s
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | nevents: 1000
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | neventsw: 0
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | pid: 21521
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | pgrp: 21521
[2025-11-24 12:29:57] 2025-11-24 17:28:27,494 | INFO     | corecount: 8
[2025-11-24 12:29:57] 2025-11-24 17:28:27,495 | INFO     | event service: False
[2025-11-24 12:29:57] 2025-11-24 17:28:27,495 | INFO     | sizes: {0: 2298756, 11: 2298756, 22: 2298784, 29: 2299074, 33: 2299102, 130496: 2386139, 130505: 2395980, 130535: 2396170}
[2025-11-24 12:29:57] 2025-11-24 17:28:27,495 | INFO     | --------------------------------------------------
[2025-11-24 12:29:57] 2025-11-24 17:28:27,495 | INFO     | 
[2025-11-24 12:29:57] 2025-11-24 17:28:27,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 12:29:57] 2025-11-24 17:28:27,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:29:57] 2025-11-24 17:28:27,575 | INFO     | job 6893875914 has completed (purged errors)
[2025-11-24 12:29:57] 2025-11-24 17:28:27,576 | INFO     | overall cleanup function is called
[2025-11-24 12:29:57] 2025-11-24 17:28:28,730 | INFO     | --- collectZombieJob: --- 10, [21521]
[2025-11-24 12:29:57] 2025-11-24 17:28:28,730 | INFO     | zombie collector waiting for pid 21521
[2025-11-24 12:29:57] 2025-11-24 17:28:28,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:29:57] 2025-11-24 17:28:28,730 | INFO     | collected zombie processes
[2025-11-24 12:29:57] 2025-11-24 17:28:28,731 | INFO     | will attempt to kill all subprocesses of pid=21521
[2025-11-24 12:29:57] 2025-11-24 17:28:29,424 | INFO     | process IDs to be killed: [21521] (in reverse order)
[2025-11-24 12:29:57] 2025-11-24 17:28:29,761 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:29:57] 2025-11-24 17:28:29,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:29:57] 2025-11-24 17:28:29,856 | INFO     | did not find any defunct processes belonging to 21521
[2025-11-24 12:29:57] 2025-11-24 17:28:29,874 | INFO     | did not find any defunct processes belonging to 21521
[2025-11-24 12:29:57] 2025-11-24 17:28:29,877 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:29:57] 2025-11-24 17:28:29,877 | INFO     | ready for new job
[2025-11-24 12:29:57] 2025-11-24 17:28:29,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:29:57] 2025-11-24 17:28:29,888 | INFO     | ***************************************
[2025-11-24 12:29:57] 2025-11-24 17:28:29,888 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:29:57] 2025-11-24 17:28:29,888 | INFO     | ***************************************
[2025-11-24 12:29:57] 2025-11-24 17:28:29,889 | INFO     | 
[2025-11-24 12:29:57] 2025-11-24 17:28:29,892 | INFO     | architecture information:
[2025-11-24 12:29:57] 2025-11-24 17:28:29,893 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:29:57] 2025-11-24 17:28:29,926 | INFO     | cat /etc/os-release:
[2025-11-24 12:29:57] NAME="CentOS Linux"
[2025-11-24 12:29:57] VERSION="7 (Core)"
[2025-11-24 12:29:57] ID="centos"
[2025-11-24 12:29:57] ID_LIKE="rhel fedora"
[2025-11-24 12:29:57] VERSION_ID="7"
[2025-11-24 12:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:29:57] ANSI_COLOR="0;31"
[2025-11-24 12:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:29:57] HOME_URL="https://www.centos.org/"
[2025-11-24 12:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:29:57] 
[2025-11-24 12:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:29:57] 
[2025-11-24 12:29:57] 2025-11-24 17:28:29,926 | INFO     | ***************************************
[2025-11-24 12:29:57] 2025-11-24 17:28:30,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 12:29:57] 2025-11-24 17:28:30,626 | INFO     | sufficient remaining disk space (89725599744 B)
[2025-11-24 12:29:57] 2025-11-24 17:28:30,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:29:57] 2025-11-24 17:28:30,626 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:29:57] 2025-11-24 17:28:30,626 | INFO     | update_server=False
[2025-11-24 12:29:57] 2025-11-24 17:28:30,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:29:57] 2025-11-24 17:28:30,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:29:57] 2025-11-24 17:28:30,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:29:57] 2025-11-24 17:28:30,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:29:57] 2025-11-24 17:28:30,775 | INFO     | aborting loop
[2025-11-24 12:29:57] 2025-11-24 17:28:30,927 | INFO     | all data control threads have been joined
[2025-11-24 12:29:57] 2025-11-24 17:28:31,336 | INFO     | all payload control threads have been joined
[2025-11-24 12:29:57] 2025-11-24 17:28:31,576 | INFO     | all job control threads have been joined
[2025-11-24 12:29:57] 2025-11-24 17:28:31,632 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:31,655 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:31,781 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:31,826 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:31,879 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:31,918 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:31,933 | INFO     | [data] control thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:32,242 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:32,243 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:32,341 | INFO     | [payload] control thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:32,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:29:57] 2025-11-24 17:28:32,582 | INFO     | [job] control thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:32,649 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:33,079 | INFO     | [job] validate thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:33,079 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:33,529 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:28:34,658 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:29:57] 2025-11-24 17:29:01,223 | INFO     | PID=4186033 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 12:29:57] 2025-11-24 17:29:01,224 | INFO     | .. there are 28 such processes running
[2025-11-24 12:29:57] 2025-11-24 17:29:01,224 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:29:57] 2025-11-24 17:29:01,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:29:57] 2025-11-24 17:29:01,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:29:57] 2025-11-24 17:29:30,010 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:29:57] 2025-11-24 17:29:31,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832279476032)>', '<ExcThread(monitor, started 139832007300864)>']
[2025-11-24 12:29:57] 2025-11-24 17:29:32,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:29:57] 2025-11-24 17:29:32,420 | INFO     | [monitor] control thread has ended
[2025-11-24 12:29:57] 2025-11-24 17:29:36,965 | INFO     | all workflow threads have been joined
[2025-11-24 12:29:57] 2025-11-24 17:29:36,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:29:57] 2025-11-24 17:29:36,967 | INFO     | traces error code: 0
[2025-11-24 12:29:57] 2025-11-24 17:29:36,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:29:57] 2025-11-24 17:29:37,165 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:29:57] 2025-11-24 17:29:37,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:29:57] 2025-11-24 17:29:37,246 [wrapper] pilotpid: 4186033
[2025-11-24 12:29:57] 2025-11-24 17:29:37,305 [wrapper] Pilot exit status: 0
[2025-11-24 12:29:57] 2025-11-24 17:29:37,415 [wrapper] pandaids: 6893875914
[2025-11-24 12:29:57] 2025-11-24 17:29:37,705 [wrapper] cleanup supervisor_pilot 2717799 4186034
[2025-11-24 12:29:57] 2025-11-24 17:29:37,880 [wrapper] Test setup, not cleaning
[2025-11-24 12:29:57] 2025-11-24 17:29:37,987 [wrapper] apfmon messages muted
[2025-11-24 12:29:57] 2025-11-24 17:29:38,051 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:29:57] 2025-11-24 17:29:38,135 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:29:57]  *** Error codes and diagnostics ***
[2025-11-24 12:29:57]     "exeErrorCode": 0,
[2025-11-24 12:29:57]     "exeErrorDiag": "",
[2025-11-24 12:29:57]     "pilotErrorCode": 0,
[2025-11-24 12:29:57]     "pilotErrorDiag": "",
[2025-11-24 12:29:57]  *** Listing of results directory ***
[2025-11-24 12:29:57] total 1340480
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-24 12:29:57] -rwx------. 1 boincer umatlas     36292 Nov 20 11:53 runpilot2-wrapper.sh
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:53 queuedata.json
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:29:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:10 run_atlas
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:10 job.xml
[2025-11-24 12:29:57] -rw-r--r--. 2 boincer umatlas 410748808 Nov 23 00:10 EVNT.47493127._000750.pool.root.1
[2025-11-24 12:29:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 12:29:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:10 shared
[2025-11-24 12:29:57] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 00:10 input.tar.gz
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:10 boinc_lockfile
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:10 pandaJob.out
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas        57 Nov 23 00:10 setup.sh.local
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas    989784 Nov 23 00:11 agis_schedconf.cvmfs.json
[2025-11-24 12:29:57] drwx------. 5 boincer umatlas      4096 Nov 23 00:11 pilot3
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas       534 Nov 24 11:28 boinc_task_state.xml
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas      6903 Nov 24 12:20 init_data.xml
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas 918296148 Nov 24 12:26 HITS.47523449._007496.pool.root.1
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas      1049 Nov 24 12:27 memory_monitor_summary.json
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas   1516227 Nov 24 12:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas   2978776 Nov 24 12:27 log.47523449._007496.job.log.tgz.1
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas        95 Nov 24 12:28 pilot_heartbeat.json
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas      8587 Nov 24 12:28 heartbeat.json
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas      4824 Nov 24 12:29 pilotlog.txt
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas  16862434 Nov 24 12:29 log.47523449._007496.job.log.1
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas       353 Nov 24 12:29 output.list
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas       620 Nov 24 12:29 runtime_log
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas  19865600 Nov 24 12:29 result.tar.gz
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 12:29 runtime_log.err
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas       664 Nov 24 12:29 3YCODmn5Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsKIKDmBkdaKn.diag
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 12:29 boinc_mmap_file
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas        30 Nov 24 12:29 wrapper_checkpoint.txt
[2025-11-24 12:29:57] -rw-r--r--. 1 boincer umatlas     21763 Nov 24 12:29 stderr.txt
[2025-11-24 12:29:57] HITS file was successfully produced:
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas 918296148 Nov 24 12:26 shared/HITS.pool.root.1
[2025-11-24 12:29:57]  *** Contents of shared directory: ***
[2025-11-24 12:29:57] total 1317904
[2025-11-24 12:29:57] -rw-r--r--. 2 boincer umatlas 410748808 Nov 23 00:10 ATLAS.root_0
[2025-11-24 12:29:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 12:29:57] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 00:10 input.tar.gz
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas 918296148 Nov 24 12:26 HITS.pool.root.1
[2025-11-24 12:29:57] -rw-------. 1 boincer umatlas  19865600 Nov 24 12:29 result.tar.gz
12:29:59 (4174364): run_atlas exited; CPU time 199332.010486
12:29:59 (4174364): called boinc_finish(0)

</stderr_txt>
]]>

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