Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:40:56 (2247346): wrapper (7.7.26015): starting
12:40:56 (2247346): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 12:40:56] Arguments: --nthreads 8
[2025-11-23 12:40:56] Threads: 8
[2025-11-23 12:40:56] Checking for CVMFS
[2025-11-23 12:40:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:40:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:40:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:40:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:40:59] 2.13.2.0 6867 29834 262956 153216 0 142 26388238 40960001 9761 16776704 0 25501540 99.622 21025732 29129 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 12:40:59] CVMFS is ok
[2025-11-23 12:40:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 12:40:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 12:40:59] Further information can be found at the LHC@home message board.
[2025-11-23 12:40:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:40:59] Checking for apptainer binary...
[2025-11-23 12:40:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 12:40:59] Running /usr/bin/apptainer --version
[2025-11-23 12:40:59] apptainer version 1.4.4-1.el9
[2025-11-23 12:40:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:41:00] c-211-11.aglt2.org
[2025-11-23 12:41:00] apptainer works
[2025-11-23 12:41:00] Set ATHENA_PROC_NUMBER=8
[2025-11-23 12:41:00] Set ATHENA_CORE_NUMBER=8
[2025-11-23 12:41:00] Starting ATLAS job with PandaID=6894052146
[2025-11-23 12:41:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:17:11]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:17:11] 2025-11-25 00:16:24,675 | INFO     | extracted standard info from prmon json
[2025-11-24 19:17:11] 2025-11-25 00:16:24,675 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:17:11] 2025-11-25 00:16:24,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:17:11] 2025-11-25 00:16:24,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 19:17:11] 2025-11-25 00:16:24,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 19:17:11] 2025-11-25 00:16:24,768 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:17:11] 2025-11-25 00:16:24,771 | INFO     | sum of square deviations: 1811428444889.6687
[2025-11-24 19:17:11] 2025-11-25 00:16:25,027 | INFO     | sum of deviations: 449145933518.3696
[2025-11-24 19:17:11] 2025-11-25 00:16:25,027 | INFO     | mean x: 1763974779.2965019
[2025-11-24 19:17:11] 2025-11-25 00:16:25,027 | INFO     | mean y: 2605116.804553026
[2025-11-24 19:17:11] 2025-11-25 00:16:25,028 | INFO     | intersect: -434774621.37121797
[2025-11-24 19:17:11] 2025-11-25 00:16:25,034 | INFO     | chi2: 6.520102091141451
[2025-11-24 19:17:11] 2025-11-25 00:16:25,037 | INFO     | sum of square deviations: 1796384205201.2412
[2025-11-24 19:17:11] 2025-11-25 00:16:25,218 | INFO     | sum of deviations: 1077760256120.4563
[2025-11-24 19:17:11] 2025-11-25 00:16:25,223 | INFO     | mean x: 1763974626.8001113
[2025-11-24 19:17:11] 2025-11-25 00:16:25,223 | INFO     | mean y: 2611488.7171492204
[2025-11-24 19:17:11] 2025-11-25 00:16:25,223 | INFO     | intersect: -1055704288.0891256
[2025-11-24 19:17:11] 2025-11-25 00:16:25,226 | INFO     | chi2: 2.6358147733811172
[2025-11-24 19:17:11] 2025-11-25 00:16:25,226 | INFO     | current chi2=2.6358147733811172 (change=59.57402604228741 %)
[2025-11-24 19:17:11] 2025-11-25 00:16:25,233 | INFO     | sum of square deviations: 1781422954430.773
[2025-11-24 19:17:11] 2025-11-25 00:16:25,409 | INFO     | monitor loop #5655: job 0:6894052146 is in state 'finished'
[2025-11-24 19:17:11] 2025-11-25 00:16:25,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:17:11] 2025-11-25 00:16:25,412 | INFO     | sum of deviations: 1072014269072.9476
[2025-11-24 19:17:11] 2025-11-25 00:16:25,412 | INFO     | mean x: 1763974474.300949
[2025-11-24 19:17:11] 2025-11-25 00:16:25,412 | INFO     | mean y: 2611430.206030151
[2025-11-24 19:17:11] 2025-11-25 00:16:25,412 | INFO     | intersect: -1058902794.7160977
[2025-11-24 19:17:11] 2025-11-25 00:16:25,419 | INFO     | chi2: 2.635590880924269
[2025-11-24 19:17:11] 2025-11-25 00:16:25,420 | INFO     | current chi2=2.635590880924269 (change=0.008494240912113201 %)
[2025-11-24 19:17:11] 2025-11-25 00:16:25,420 | INFO     | right removable region: 1790
[2025-11-24 19:17:11] 2025-11-25 00:16:25,427 | INFO     | sum of square deviations: 1796382890469.8418
[2025-11-24 19:17:11] 2025-11-25 00:16:25,612 | INFO     | sum of deviations: 1010321478.7757416
[2025-11-24 19:17:11] 2025-11-25 00:16:25,613 | INFO     | mean x: 1763974931.7995546
[2025-11-24 19:17:11] 2025-11-25 00:16:25,613 | INFO     | mean y: 2609655.968819599
[2025-11-24 19:17:11] 2025-11-25 00:16:25,613 | INFO     | intersect: 1617561.3707949338
[2025-11-24 19:17:11] 2025-11-25 00:16:25,620 | INFO     | chi2: 4.173158765049896
[2025-11-24 19:17:11] 2025-11-25 00:16:25,620 | INFO     | current chi2=4.173158765049896 (change=35.99549966066074 %)
[2025-11-24 19:17:11] 2025-11-25 00:16:25,627 | INFO     | sum of square deviations: 1781420763186.3745
[2025-11-24 19:17:11] 2025-11-25 00:16:25,807 | INFO     | sum of deviations: -27683714299.70807
[2025-11-24 19:17:11] 2025-11-25 00:16:25,807 | INFO     | mean x: 1763975084.3031826
[2025-11-24 19:17:11] 2025-11-25 00:16:25,807 | INFO     | mean y: 2609947.931323283
[2025-11-24 19:17:11] 2025-11-25 00:16:25,808 | INFO     | intersect: 30022552.11491096
[2025-11-24 19:17:11] 2025-11-25 00:16:25,814 | INFO     | chi2: 4.154464835183963
[2025-11-24 19:17:11] 2025-11-25 00:16:25,815 | INFO     | current chi2=4.154464835183963 (change=0.4479563543686534 %)
[2025-11-24 19:17:11] 2025-11-25 00:16:25,815 | INFO     | left removable region: 20
[2025-11-24 19:17:11] 2025-11-25 00:16:25,817 | INFO     | sum of square deviations: 1719489497048.5818
[2025-11-24 19:17:11] 2025-11-25 00:16:25,908 | INFO     | time since job start (110050s) is within the limit (172800.0s)
[2025-11-24 19:17:11] 2025-11-25 00:16:25,993 | INFO     | sum of deviations: 591268472531.9459
[2025-11-24 19:17:11] 2025-11-25 00:16:25,994 | INFO     | mean x: 1763975053.8152542
[2025-11-24 19:17:11] 2025-11-25 00:16:25,994 | INFO     | mean y: 2616348.4983050846
[2025-11-24 19:17:11] 2025-11-25 00:16:25,994 | INFO     | intersect: -603949052.1302133
[2025-11-24 19:17:11] 2025-11-25 00:16:26,000 | INFO     | chi2: 0.2507271352063003
[2025-11-24 19:17:11] 2025-11-25 00:16:26,001 | INFO     | current memory leak: 0.34 B/s (using 1770 data points, chi2=0.25)
[2025-11-24 19:17:11] 2025-11-25 00:16:26,007 | INFO     | could have reported an average CPU frequency of 2441 MHz (63 samples)
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | ..............................
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . Timing measurements:
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . get job = 0 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . initial setup = 7 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . payload setup = 41 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . stage-in = 0 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . payload execution = 109844 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . stage-out = 21 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,008 | INFO     | . log creation = 11 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,009 | INFO     | ..............................
[2025-11-24 19:17:11] 2025-11-25 00:16:26,360 | INFO     | 
[2025-11-24 19:17:11] 2025-11-25 00:16:26,361 | INFO     | job summary report
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | --------------------------------------------------
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | PanDA job id: 6894052146
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | task id: 47523659
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | errors: (none)
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | pilot state: finished 
[2025-11-24 19:17:11] 2025-11-25 00:16:26,362 | INFO     | transexitcode: 0
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | exeerrorcode: 0
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | exeerrordiag: 
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | exitcode: 0
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | exitmsg: OK
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | cpuconsumptiontime: 143491 s
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | nevents: 400
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | neventsw: 0
[2025-11-24 19:17:11] 2025-11-25 00:16:26,363 | INFO     | pid: 2261645
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | pgrp: 2261645
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | corecount: 8
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | event service: False
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | sizes: {0: 2298168, 1: 2298252, 2: 2298451, 13: 2298451, 24: 2298507, 31: 2298797, 35: 2298953, 109895: 2371482, 109898: 2371481, 109921: 2381326, 109925: 2381382,
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | --------------------------------------------------
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | 
[2025-11-24 19:17:11] 2025-11-25 00:16:26,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 19:17:11] 2025-11-25 00:16:26,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:17:11] 2025-11-25 00:16:26,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:17:11] 2025-11-25 00:16:26,692 | INFO     | job 6894052146 has completed (purged errors)
[2025-11-24 19:17:11] 2025-11-25 00:16:26,693 | INFO     | overall cleanup function is called
[2025-11-24 19:17:11] 2025-11-25 00:16:27,747 | INFO     | --- collectZombieJob: --- 10, [2261645]
[2025-11-24 19:17:11] 2025-11-25 00:16:27,747 | INFO     | zombie collector waiting for pid 2261645
[2025-11-24 19:17:11] 2025-11-25 00:16:27,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:17:11] 2025-11-25 00:16:27,748 | INFO     | collected zombie processes
[2025-11-24 19:17:11] 2025-11-25 00:16:27,748 | INFO     | will attempt to kill all subprocesses of pid=2261645
[2025-11-24 19:17:11] 2025-11-25 00:16:29,868 | INFO     | process IDs to be killed: [2261645] (in reverse order)
[2025-11-24 19:17:11] 2025-11-25 00:16:30,125 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:17:11] 2025-11-25 00:16:30,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:17:11] 2025-11-25 00:16:30,160 | INFO     | did not find any defunct processes belonging to 2261645
[2025-11-24 19:17:11] 2025-11-25 00:16:30,198 | INFO     | did not find any defunct processes belonging to 2261645
[2025-11-24 19:17:11] 2025-11-25 00:16:30,205 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:17:11] 2025-11-25 00:16:30,205 | INFO     | ready for new job
[2025-11-24 19:17:11] 2025-11-25 00:16:30,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:17:11] 2025-11-25 00:16:30,365 | INFO     | ***************************************
[2025-11-24 19:17:11] 2025-11-25 00:16:30,400 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:17:11] 2025-11-25 00:16:30,400 | INFO     | ***************************************
[2025-11-24 19:17:11] 2025-11-25 00:16:30,400 | INFO     | 
[2025-11-24 19:17:11] 2025-11-25 00:16:30,452 | INFO     | architecture information:
[2025-11-24 19:17:11] 2025-11-25 00:16:30,485 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:17:11] 2025-11-25 00:16:30,527 | INFO     | cat /etc/os-release:
[2025-11-24 19:17:11] NAME="CentOS Linux"
[2025-11-24 19:17:11] VERSION="7 (Core)"
[2025-11-24 19:17:11] ID="centos"
[2025-11-24 19:17:11] ID_LIKE="rhel fedora"
[2025-11-24 19:17:11] VERSION_ID="7"
[2025-11-24 19:17:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:17:11] ANSI_COLOR="0;31"
[2025-11-24 19:17:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:17:11] HOME_URL="https://www.centos.org/"
[2025-11-24 19:17:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:17:11] 
[2025-11-24 19:17:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:17:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:17:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:17:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:17:11] 
[2025-11-24 19:17:11] 2025-11-25 00:16:30,528 | INFO     | ***************************************
[2025-11-24 19:17:11] 2025-11-25 00:16:31,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 19:17:11] 2025-11-25 00:16:31,102 | INFO     | sufficient remaining disk space (59217281024 B)
[2025-11-24 19:17:11] 2025-11-25 00:16:31,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:17:11] 2025-11-25 00:16:31,103 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:17:11] 2025-11-25 00:16:31,103 | INFO     | update_server=False
[2025-11-24 19:17:11] 2025-11-25 00:16:31,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:17:11] 2025-11-25 00:16:31,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:17:11] 2025-11-25 00:16:31,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:17:11] 2025-11-25 00:16:31,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:17:11] 2025-11-25 00:16:31,510 | INFO     | aborting loop
[2025-11-24 19:17:11] 2025-11-25 00:16:31,786 | INFO     | all data control threads have been joined
[2025-11-24 19:17:11] 2025-11-25 00:16:32,112 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,115 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,119 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,203 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,228 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:17:11] 2025-11-25 00:16:32,452 | INFO     | all job control threads have been joined
[2025-11-24 19:17:11] 2025-11-25 00:16:32,452 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,497 | INFO     | all payload control threads have been joined
[2025-11-24 19:17:11] 2025-11-25 00:16:32,525 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,797 | INFO     | [data] control thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:32,978 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:33,212 | INFO     | [job] validate thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:33,365 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:33,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:33,417 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:33,488 | INFO     | [job] control thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:33,505 | INFO     | [payload] control thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:36,481 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:17:11] 2025-11-25 00:16:58,345 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:17:11] 2025-11-25 00:16:59,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682070660928)>', '<ExcThread(monitor, started 139681572308736)>']
[2025-11-24 19:17:11] 2025-11-25 00:17:04,473 | INFO     | all workflow threads have been joined
[2025-11-24 19:17:11] 2025-11-25 00:17:04,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:17:11] 2025-11-25 00:17:04,496 | INFO     | traces error code: 0
[2025-11-24 19:17:11] 2025-11-25 00:17:04,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:17:11] 2025-11-25 00:17:04,622 | INFO     | PID=2251931 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:17:11] 2025-11-25 00:17:04,623 | INFO     | .. there are 11 such processes running
[2025-11-24 19:17:11] 2025-11-25 00:17:04,624 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:17:11] 2025-11-25 00:17:04,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:17:11] 2025-11-25 00:17:04,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:17:11] 2025-11-25 00:17:04,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:17:11] 2025-11-25 00:17:04,624 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 19:17:11] 2025-11-25 00:17:04,624 | INFO     | [monitor] control thread has ended
[2025-11-24 19:17:11] 2025-11-25 00:17:09,128 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:17:11] 2025-11-25 00:17:09,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:17:11] 2025-11-25 00:17:09,303 [wrapper] pilotpid: 2251931
[2025-11-24 19:17:11] 2025-11-25 00:17:09,356 [wrapper] Pilot exit status: 0
[2025-11-24 19:17:11] 2025-11-25 00:17:09,740 [wrapper] pandaids: 6894052146
[2025-11-24 19:17:11] 2025-11-25 00:17:10,068 [wrapper] cleanup supervisor_pilot  654390 2251932
[2025-11-24 19:17:11] 2025-11-25 00:17:10,093 [wrapper] Test setup, not cleaning
[2025-11-24 19:17:11] 2025-11-25 00:17:10,118 [wrapper] apfmon messages muted
[2025-11-24 19:17:11] 2025-11-25 00:17:10,151 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:17:11] 2025-11-25 00:17:10,202 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:17:11]  *** Error codes and diagnostics ***
[2025-11-24 19:17:11]     "exeErrorCode": 0,
[2025-11-24 19:17:11]     "exeErrorDiag": "",
[2025-11-24 19:17:11]     "pilotErrorCode": 0,
[2025-11-24 19:17:11]     "pilotErrorDiag": "",
[2025-11-24 19:17:11]  *** Listing of results directory ***
[2025-11-24 19:17:11] total 640236
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 13:28 pilot3.tar.gz
[2025-11-24 19:17:11] -rwx------. 1 boincer umatlas     36292 Nov 22 13:39 runpilot2-wrapper.sh
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 13:39 queuedata.json
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas       100 Nov 23 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:17:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 12:40 run_atlas
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas       105 Nov 23 12:40 job.xml
[2025-11-24 19:17:11] -rw-r--r--. 2 boincer umatlas 302121022 Nov 23 12:40 EVNT.47523657._000005.pool.root.1
[2025-11-24 19:17:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 12:40 start_atlas.sh
[2025-11-24 19:17:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 12:40 shared
[2025-11-24 19:17:11] -rw-r--r--. 2 boincer umatlas    589942 Nov 23 12:40 input.tar.gz
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas         0 Nov 23 12:40 boinc_lockfile
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas      2614 Nov 23 12:41 pandaJob.out
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas        57 Nov 23 12:41 setup.sh.local
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas    989786 Nov 23 12:42 agis_schedconf.cvmfs.json
[2025-11-24 19:17:11] drwx------. 5 boincer umatlas      4096 Nov 23 12:42 pilot3
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas 321824619 Nov 24 19:09 HITS.47523659._000120.pool.root.1
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas      6616 Nov 24 19:09 init_data.xml
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas       532 Nov 24 19:09 boinc_task_state.xml
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas      1044 Nov 24 19:14 memory_monitor_summary.json
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:15 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas   1571936 Nov 24 19:15 log.47523659._000120.job.log.tgz.1
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas      7830 Nov 24 19:16 heartbeat.json
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas        95 Nov 24 19:17 pilot_heartbeat.json
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas       893 Nov 24 19:17 pilotlog.txt
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas  12299355 Nov 24 19:17 log.47523659._000120.job.log.1
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:17 boinc_mmap_file
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas       357 Nov 24 19:17 output.list
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:17 runtime_log
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas  13895680 Nov 24 19:17 result.tar.gz
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas       664 Nov 24 19:17 TBHLDmOh7g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmILKKDm5miBYn.diag
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 19:17 runtime_log.err
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:17 wrapper_checkpoint.txt
[2025-11-24 19:17:11] -rw-r--r--. 1 boincer umatlas     21289 Nov 24 19:17 stderr.txt
[2025-11-24 19:17:11] HITS file was successfully produced:
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas 321824619 Nov 24 19:09 shared/HITS.pool.root.1
[2025-11-24 19:17:11]  *** Contents of shared directory: ***
[2025-11-24 19:17:11] total 623500
[2025-11-24 19:17:11] -rw-r--r--. 2 boincer umatlas 302121022 Nov 23 12:40 ATLAS.root_0
[2025-11-24 19:17:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 12:40 start_atlas.sh
[2025-11-24 19:17:11] -rw-r--r--. 2 boincer umatlas    589942 Nov 23 12:40 input.tar.gz
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas 321824619 Nov 24 19:09 HITS.pool.root.1
[2025-11-24 19:17:11] -rw-------. 1 boincer umatlas  13895680 Nov 24 19:17 result.tar.gz
19:17:33 (2247346): run_atlas exited; CPU time 147465.844981
19:17:33 (2247346): called boinc_finish(0)

</stderr_txt>
]]>

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