Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:04 (2898122): wrapper (7.7.26015): starting
00:10:04 (2898122): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:10:04] Arguments: --nthreads 8
[2025-11-23 00:10:04] Threads: 8
[2025-11-23 00:10:04] Checking for CVMFS
[2025-11-23 00:10:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:10:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:10:07] 2.13.3.0 17216 25156 503980 153197 1 711 21455435 32935937 71070 16776704 0 448478905 99.679 349909011 48370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:10:07] CVMFS is ok
[2025-11-23 00:10:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:10:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:10:07] Further information can be found at the LHC@home message board.
[2025-11-23 00:10:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:10:07] Checking for apptainer binary...
[2025-11-23 00:10:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:10:07] Running /usr/bin/apptainer --version
[2025-11-23 00:10:08] apptainer version 1.4.4-1.el9
[2025-11-23 00:10:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:10:08] c7-9-14.aglt2.org
[2025-11-23 00:10:08] apptainer works
[2025-11-23 00:10:08] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:10:08] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:10:08] Starting ATLAS job with PandaID=6894289672
[2025-11-23 00:10:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 14:37:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 14:37:55] 2025-11-23 19:37:09,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:37:55] 2025-11-23 19:37:09,622 | INFO     | time since job start (51903s) is within the limit (172800.0s)
[2025-11-23 14:37:55] 2025-11-23 19:37:11,629 | INFO     | time since job start (51905s) is within the limit (172800.0s)
[2025-11-23 14:37:55] 2025-11-23 19:37:11,669 | INFO     | monitor loop #2858: job 0:6894289672 is in state 'finished'
[2025-11-23 14:37:55] 2025-11-23 19:37:11,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:37:55] 2025-11-23 19:37:13,645 | INFO     | time since job start (51907s) is within the limit (172800.0s)
[2025-11-23 14:37:55] 2025-11-23 19:37:14,186 | INFO     | monitor loop #2859: job 0:6894289672 is in state 'finished'
[2025-11-23 14:37:55] 2025-11-23 19:37:14,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:37:55] 2025-11-23 19:37:15,653 | INFO     | time since job start (51909s) is within the limit (172800.0s)
[2025-11-23 14:37:55] 2025-11-23 19:37:16,692 | INFO     | monitor loop #2860: job 0:6894289672 is in state 'finished'
[2025-11-23 14:37:55] 2025-11-23 19:37:16,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:37:55] 2025-11-23 19:37:17,693 | INFO     | time since job start (51911s) is within the limit (172800.0s)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,201 | INFO     | monitor loop #2861: job 0:6894289672 is in state 'finished'
[2025-11-23 14:37:55] 2025-11-23 19:37:19,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,630 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 14:37:55] 2025-11-23 19:37:19,639 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2797890624975
[2025-11-23 14:37:55] 2025-11-23 19:37:19,664 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6894289672/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,665 | INFO     | extracted standard info from prmon json
[2025-11-23 14:37:55] 2025-11-23 19:37:19,665 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 14:37:55] 2025-11-23 19:37:19,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 14:37:55] 2025-11-23 19:37:19,681 | INFO     | fitting pss+swap vs Time
[2025-11-23 14:37:55] 2025-11-23 19:37:19,682 | INFO     | sum of square deviations: 188405943648.73886
[2025-11-23 14:37:55] 2025-11-23 19:37:19,697 | INFO     | sum of deviations: 1136738087129.414
[2025-11-23 14:37:55] 2025-11-23 19:37:19,697 | INFO     | mean x: 1763900762.4403777
[2025-11-23 14:37:55] 2025-11-23 19:37:19,697 | INFO     | mean y: 2833393.8299881937
[2025-11-23 14:37:55] 2025-11-23 19:37:19,697 | INFO     | intersect: -10639575968.375988
[2025-11-23 14:37:55] 2025-11-23 19:37:19,698 | INFO     | chi2: 18.993353110629574
[2025-11-23 14:37:55] 2025-11-23 19:37:19,703 | INFO     | sum of square deviations: 185089127960.8039
[2025-11-23 14:37:55] 2025-11-23 19:37:19,712 | INFO     | time since job start (51913s) is within the limit (172800.0s)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,719 | INFO     | sum of deviations: 1418214352329.2192
[2025-11-23 14:37:55] 2025-11-23 19:37:19,719 | INFO     | mean x: 1763900609.9489312
[2025-11-23 14:37:55] 2025-11-23 19:37:19,720 | INFO     | mean y: 2846340.1912114015
[2025-11-23 14:37:55] 2025-11-23 19:37:19,720 | INFO     | intersect: -13512745789.248161
[2025-11-23 14:37:55] 2025-11-23 19:37:19,720 | INFO     | chi2: 15.665037986177136
[2025-11-23 14:37:55] 2025-11-23 19:37:19,720 | INFO     | current chi2=15.665037986177136 (change=17.52357840696257 %)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,720 | INFO     | right removable region: 841
[2025-11-23 14:37:55] 2025-11-23 19:37:19,721 | INFO     | sum of square deviations: 185088383760.80392
[2025-11-23 14:37:55] 2025-11-23 19:37:19,737 | INFO     | sum of deviations: 794832509716.6001
[2025-11-23 14:37:55] 2025-11-23 19:37:19,737 | INFO     | mean x: 1763900914.9489312
[2025-11-23 14:37:55] 2025-11-23 19:37:19,737 | INFO     | mean y: 2849107.9441805226
[2025-11-23 14:37:55] 2025-11-23 19:37:19,737 | INFO     | intersect: -7571941717.027992
[2025-11-23 14:37:55] 2025-11-23 19:37:19,738 | INFO     | chi2: 14.614387852010454
[2025-11-23 14:37:55] 2025-11-23 19:37:19,738 | INFO     | current chi2=14.614387852010454 (change=23.05525113503231 %)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,738 | INFO     | left removable region: 10
[2025-11-23 14:37:55] 2025-11-23 19:37:19,738 | INFO     | sum of square deviations: 177928173206.90503
[2025-11-23 14:37:55] 2025-11-23 19:37:19,754 | INFO     | sum of deviations: 847468543661.2665
[2025-11-23 14:37:55] 2025-11-23 19:37:19,755 | INFO     | mean x: 1763900884.4681108
[2025-11-23 14:37:55] 2025-11-23 19:37:19,755 | INFO     | mean y: 2878695.5006016847
[2025-11-23 14:37:55] 2025-11-23 19:37:19,755 | INFO     | intersect: -8398548053.172371
[2025-11-23 14:37:55] 2025-11-23 19:37:19,759 | INFO     | chi2: 7.461114355924804
[2025-11-23 14:37:55] 2025-11-23 19:37:19,759 | INFO     | current memory leak: 4.76 B/s (using 831 data points, chi2=7.46)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | could have reported an average CPU frequency of 3798 MHz (32 samples)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | ..............................
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . Timing measurements:
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . get job = 0 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . initial setup = 8 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . payload setup = 67 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . stage-in = 0 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . payload execution = 51694 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . stage-out = 6 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | . log creation = 1 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,760 | INFO     | ..............................
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | 
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | job summary report
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | --------------------------------------------------
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | PanDA job id: 6894289672
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | task id: 47533967
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | errors: (none)
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | pilot state: finished 
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | transexitcode: 0
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | exeerrorcode: 0
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | exeerrordiag: 
[2025-11-23 14:37:55] 2025-11-23 19:37:19,866 | INFO     | exitcode: 0
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | exitmsg: OK
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | cpuconsumptiontime: 137274 s
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | nevents: 1000
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | neventsw: 0
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | pid: 2988085
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | pgrp: 2988085
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | corecount: 8
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | event service: False
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | sizes: {0: 2297927, 1: 2298613, 2: 2298812, 13: 2298812, 24: 2298868, 35: 2298896, 45: 2299052, 50: 2299342, 56: 2299370, 51767: 2347715, 51774: 2356711, 51777: 23
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | --------------------------------------------------
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | 
[2025-11-23 14:37:55] 2025-11-23 19:37:19,867 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-11-23 14:37:55] 2025-11-23 19:37:20,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 14:37:55] 2025-11-23 19:37:20,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 14:37:55] 2025-11-23 19:37:20,083 | INFO     | job 6894289672 has completed (purged errors)
[2025-11-23 14:37:55] 2025-11-23 19:37:20,083 | INFO     | overall cleanup function is called
[2025-11-23 14:37:55] 2025-11-23 19:37:21,112 | INFO     | --- collectZombieJob: --- 10, [2988085]
[2025-11-23 14:37:55] 2025-11-23 19:37:21,112 | INFO     | zombie collector waiting for pid 2988085
[2025-11-23 14:37:55] 2025-11-23 19:37:21,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 14:37:55] 2025-11-23 19:37:21,113 | INFO     | collected zombie processes
[2025-11-23 14:37:55] 2025-11-23 19:37:21,113 | INFO     | will attempt to kill all subprocesses of pid=2988085
[2025-11-23 14:37:55] 2025-11-23 19:37:22,713 | INFO     | process IDs to be killed: [2988085] (in reverse order)
[2025-11-23 14:37:55] 2025-11-23 19:37:23,246 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 14:37:55] 2025-11-23 19:37:23,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 14:37:55] 2025-11-23 19:37:23,281 | INFO     | did not find any defunct processes belonging to 2988085
[2025-11-23 14:37:55] 2025-11-23 19:37:23,309 | INFO     | did not find any defunct processes belonging to 2988085
[2025-11-23 14:37:55] 2025-11-23 19:37:23,310 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 14:37:55] 2025-11-23 19:37:23,310 | INFO     | ready for new job
[2025-11-23 14:37:55] 2025-11-23 19:37:23,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 14:37:55] 2025-11-23 19:37:23,313 | INFO     | ***************************************
[2025-11-23 14:37:55] 2025-11-23 19:37:23,314 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 14:37:55] 2025-11-23 19:37:23,314 | INFO     | ***************************************
[2025-11-23 14:37:55] 2025-11-23 19:37:23,314 | INFO     | 
[2025-11-23 14:37:55] 2025-11-23 19:37:23,318 | INFO     | architecture information:
[2025-11-23 14:37:55] 2025-11-23 19:37:23,318 | INFO     | executing command: cat /etc/os-release
[2025-11-23 14:37:55] 2025-11-23 19:37:23,367 | INFO     | cat /etc/os-release:
[2025-11-23 14:37:55] NAME="CentOS Linux"
[2025-11-23 14:37:55] VERSION="7 (Core)"
[2025-11-23 14:37:55] ID="centos"
[2025-11-23 14:37:55] ID_LIKE="rhel fedora"
[2025-11-23 14:37:55] VERSION_ID="7"
[2025-11-23 14:37:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 14:37:55] ANSI_COLOR="0;31"
[2025-11-23 14:37:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 14:37:55] HOME_URL="https://www.centos.org/"
[2025-11-23 14:37:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 14:37:55] 
[2025-11-23 14:37:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 14:37:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 14:37:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 14:37:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 14:37:55] 
[2025-11-23 14:37:55] 2025-11-23 19:37:23,369 | INFO     | ***************************************
[2025-11-23 14:37:55] 2025-11-23 19:37:23,872 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-11-23 14:37:55] 2025-11-23 19:37:23,906 | INFO     | sufficient remaining disk space (66966257664 B)
[2025-11-23 14:37:55] 2025-11-23 19:37:23,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 14:37:55] 2025-11-23 19:37:23,906 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 14:37:55] 2025-11-23 19:37:23,906 | INFO     | update_server=False
[2025-11-23 14:37:55] 2025-11-23 19:37:23,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 14:37:55] 2025-11-23 19:37:24,060 | INFO     | all data control threads have been joined
[2025-11-23 14:37:55] 2025-11-23 19:37:24,264 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 14:37:55] 2025-11-23 19:37:24,264 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 14:37:55] 2025-11-23 19:37:24,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:37:55] 2025-11-23 19:37:24,265 | INFO     | will abort loop
[2025-11-23 14:37:55] 2025-11-23 19:37:24,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 14:37:55] 2025-11-23 19:37:24,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 14:37:55] 2025-11-23 19:37:24,886 | INFO     | all payload control threads have been joined
[2025-11-23 14:37:55] 2025-11-23 19:37:24,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:37:55] 2025-11-23 19:37:24,912 | INFO     | [job] retrieve thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:24,943 | INFO     | [payload] validate_post thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:24,998 | INFO     | [data] copytool_in thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,066 | INFO     | [data] control thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,182 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,183 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,270 | INFO     | [job] job monitor thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,271 | INFO     | all job control threads have been joined
[2025-11-23 14:37:55] 2025-11-23 19:37:25,295 | INFO     | [payload] failed_post thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,403 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,404 | INFO     | [job] validate thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,892 | INFO     | [payload] control thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:25,894 | INFO     | [job] queue monitor thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:26,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:26,280 | INFO     | [job] control thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:26,429 | INFO     | [data] copytool_out thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:28,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 14:37:55] 2025-11-23 19:37:37,856 | INFO     | [monitor] cgroup control has ended
[2025-11-23 14:37:55] 2025-11-23 19:37:39,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357005813568)>', '<ExcThread(monitor, started 140356725212928)>']
[2025-11-23 14:37:55] 2025-11-23 19:37:44,310 | INFO     | all workflow threads have been joined
[2025-11-23 14:37:55] 2025-11-23 19:37:44,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 14:37:55] 2025-11-23 19:37:44,311 | INFO     | traces error code: 0
[2025-11-23 14:37:55] 2025-11-23 19:37:44,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 14:37:55] 2025-11-23 19:37:54,272 | INFO     | PID=2930164 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 14:37:55] 2025-11-23 19:37:54,272 | INFO     | .. there are 92 such processes running
[2025-11-23 14:37:55] 2025-11-23 19:37:54,273 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 14:37:55] 2025-11-23 19:37:54,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 14:37:55] 2025-11-23 19:37:54,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 14:37:55] 2025-11-23 19:37:54,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 14:37:55] 2025-11-23 19:37:54,273 | INFO     | [monitor] control thread has ended
[2025-11-23 14:37:55] 2025-11-23 19:37:54,436 [wrapper] ==== pilot stdout END ====
[2025-11-23 14:37:55] 2025-11-23 19:37:54,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 14:37:55] 2025-11-23 19:37:54,468 [wrapper] pilotpid: 2930164
[2025-11-23 14:37:55] 2025-11-23 19:37:54,482 [wrapper] Pilot exit status: 0
[2025-11-23 14:37:55] 2025-11-23 19:37:54,546 [wrapper] pandaids: 6894289672
[2025-11-23 14:37:55] 2025-11-23 19:37:54,974 [wrapper] cleanup supervisor_pilot  339777 2930165
[2025-11-23 14:37:55] 2025-11-23 19:37:55,006 [wrapper] Test setup, not cleaning
[2025-11-23 14:37:55] 2025-11-23 19:37:55,031 [wrapper] apfmon messages muted
[2025-11-23 14:37:55] 2025-11-23 19:37:55,049 [wrapper] ==== wrapper stdout END ====
[2025-11-23 14:37:55] 2025-11-23 19:37:55,077 [wrapper] ==== wrapper stderr END ====
[2025-11-23 14:37:55]  *** Error codes and diagnostics ***
[2025-11-23 14:37:55]     "exeErrorCode": 0,
[2025-11-23 14:37:55]     "exeErrorDiag": "",
[2025-11-23 14:37:55]     "pilotErrorCode": 0,
[2025-11-23 14:37:55]     "pilotErrorDiag": "",
[2025-11-23 14:37:55]  *** Listing of results directory ***
[2025-11-23 14:37:55] total 1323368
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 06:23 pilot3.tar.gz
[2025-11-23 14:37:55] -rwx------. 1 boincer umatlas     36292 Nov 21 06:31 runpilot2-wrapper.sh
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:31 queuedata.json
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 14:37:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:10 run_atlas
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:10 job.xml
[2025-11-23 14:37:55] -rw-r--r--. 2 boincer umatlas 409132678 Nov 23 00:10 EVNT.47493127._002409.pool.root.1
[2025-11-23 14:37:55] -rw-r--r--. 2 boincer umatlas    590095 Nov 23 00:10 input.tar.gz
[2025-11-23 14:37:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-23 14:37:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:10 shared
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:10 boinc_lockfile
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:10 pandaJob.out
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas        57 Nov 23 00:10 setup.sh.local
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas    989784 Nov 23 00:11 agis_schedconf.cvmfs.json
[2025-11-23 14:37:55] drwx------. 5 boincer umatlas      4096 Nov 23 00:12 pilot3
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas       533 Nov 23 14:19 boinc_task_state.xml
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas      7173 Nov 23 14:28 init_data.xml
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas 925626082 Nov 23 14:36 HITS.47533967._003809.pool.root.1
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas      1063 Nov 23 14:36 memory_monitor_summary.json
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas   1526164 Nov 23 14:36 agis_ddmendpoints.agis.ALL.json
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas   1990664 Nov 23 14:36 log.47533967._003809.job.log.tgz.1
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas      8605 Nov 23 14:37 heartbeat.json
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas        29 Nov 23 14:37 wrapper_checkpoint.txt
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 14:37 boinc_mmap_file
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas       823 Nov 23 14:37 pilotlog.txt
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas        95 Nov 23 14:37 pilot_heartbeat.json
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas   6230133 Nov 23 14:37 log.47533967._003809.job.log.1
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas       353 Nov 23 14:37 output.list
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas       620 Nov 23 14:37 runtime_log
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas   8243200 Nov 23 14:37 result.tar.gz
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas      9356 Nov 23 14:37 runtime_log.err
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas       661 Nov 23 14:37 rrfKDmmXeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsLJKDm9mWsGm.diag
[2025-11-23 14:37:55] -rw-r--r--. 1 boincer umatlas     21815 Nov 23 14:37 stderr.txt
[2025-11-23 14:37:55] HITS file was successfully produced:
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas 925626082 Nov 23 14:36 shared/HITS.pool.root.1
[2025-11-23 14:37:55]  *** Contents of shared directory: ***
[2025-11-23 14:37:55] total 1312132
[2025-11-23 14:37:55] -rw-r--r--. 2 boincer umatlas 409132678 Nov 23 00:10 ATLAS.root_0
[2025-11-23 14:37:55] -rw-r--r--. 2 boincer umatlas    590095 Nov 23 00:10 input.tar.gz
[2025-11-23 14:37:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas 925626082 Nov 23 14:36 HITS.pool.root.1
[2025-11-23 14:37:55] -rw-------. 1 boincer umatlas   8243200 Nov 23 14:37 result.tar.gz
14:37:57 (2898122): run_atlas exited; CPU time 138104.779551
14:37:57 (2898122): called boinc_finish(0)

</stderr_txt>
]]>

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