Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:42 (736121): wrapper (7.7.26015): starting
13:22:42 (736121): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 13:22:42] Arguments: --nthreads 8
[2025-11-24 13:22:42] Threads: 8
[2025-11-24 13:22:42] Checking for CVMFS
[2025-11-24 13:22:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:22:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:22:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:22:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:22:43] 2.13.3.0 9863 27390 312376 153255 0 321 28296487 32935936 26024 16776704 0 157113291 99.796 84200479 33486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 13:22:43] CVMFS is ok
[2025-11-24 13:22:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:22:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:22:43] Further information can be found at the LHC@home message board.
[2025-11-24 13:22:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:22:43] Checking for apptainer binary...
[2025-11-24 13:22:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:22:43] Running /usr/bin/apptainer --version
[2025-11-24 13:22:43] apptainer version 1.4.4-1.el9
[2025-11-24 13:22:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:22:43] c-5-3.aglt2.org
[2025-11-24 13:22:43] apptainer works
[2025-11-24 13:22:43] Set ATHENA_PROC_NUMBER=8
[2025-11-24 13:22:43] Set ATHENA_CORE_NUMBER=8
[2025-11-24 13:22:43] Starting ATLAS job with PandaID=6895328687
[2025-11-24 13:22:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:21:53]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:21:53] 2025-11-25 03:21:07,075 | INFO     | monitor loop #2320: job 0:6895328687 is in state 'finished'
[2025-11-24 22:21:53] 2025-11-25 03:21:07,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,733 | INFO     | time since job start (32295s) is within the limit (172800.0s)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,831 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:21:53] 2025-11-25 03:21:08,838 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9819749999997
[2025-11-24 22:21:53] 2025-11-25 03:21:08,845 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328687/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,846 | INFO     | extracted standard info from prmon json
[2025-11-24 22:21:53] 2025-11-25 03:21:08,846 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:21:53] 2025-11-25 03:21:08,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:21:53] 2025-11-25 03:21:08,858 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:21:53] 2025-11-25 03:21:08,859 | INFO     | sum of square deviations: 45903318377.99237
[2025-11-24 22:21:53] 2025-11-25 03:21:08,867 | INFO     | sum of deviations: 552362306020.3435
[2025-11-24 22:21:53] 2025-11-25 03:21:08,867 | INFO     | mean x: 1764024702.0037806
[2025-11-24 22:21:53] 2025-11-25 03:21:08,867 | INFO     | mean y: 2974280.8279773155
[2025-11-24 22:21:53] 2025-11-25 03:21:08,867 | INFO     | intersect: -21223829939.5573
[2025-11-24 22:21:53] 2025-11-25 03:21:08,868 | INFO     | chi2: 4.321868919715079
[2025-11-24 22:21:53] 2025-11-25 03:21:08,869 | INFO     | sum of square deviations: 44613973882.99248
[2025-11-24 22:21:53] 2025-11-25 03:21:08,877 | INFO     | sum of deviations: 702472075308.0837
[2025-11-24 22:21:53] 2025-11-25 03:21:08,877 | INFO     | mean x: 1764024549.5038168
[2025-11-24 22:21:53] 2025-11-25 03:21:08,877 | INFO     | mean y: 2992017.7080152673
[2025-11-24 22:21:53] 2025-11-25 03:21:08,877 | INFO     | intersect: -27772565242.3178
[2025-11-24 22:21:53] 2025-11-25 03:21:08,878 | INFO     | chi2: 1.9839420591874268
[2025-11-24 22:21:53] 2025-11-25 03:21:08,878 | INFO     | current chi2=1.9839420591874268 (change=54.09527461285848 %)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,879 | INFO     | sum of square deviations: 43349001937.992386
[2025-11-24 22:21:53] 2025-11-25 03:21:08,887 | INFO     | sum of deviations: 709337416623.9597
[2025-11-24 22:21:53] 2025-11-25 03:21:08,887 | INFO     | mean x: 1764024397.0038536
[2025-11-24 22:21:53] 2025-11-25 03:21:08,887 | INFO     | mean y: 2992827.520231214
[2025-11-24 22:21:53] 2025-11-25 03:21:08,887 | INFO     | intersect: -28862458571.389248
[2025-11-24 22:21:53] 2025-11-25 03:21:08,888 | INFO     | chi2: 1.839759165077886
[2025-11-24 22:21:53] 2025-11-25 03:21:08,888 | INFO     | current chi2=1.839759165077886 (change=7.2674952094414795 %)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,888 | INFO     | right removable region: 518
[2025-11-24 22:21:53] 2025-11-25 03:21:08,889 | INFO     | sum of square deviations: 44613972662.99248
[2025-11-24 22:21:53] 2025-11-25 03:21:08,897 | INFO     | sum of deviations: 428814192904.0158
[2025-11-24 22:21:53] 2025-11-25 03:21:08,897 | INFO     | mean x: 1764024854.5038168
[2025-11-24 22:21:53] 2025-11-25 03:21:08,897 | INFO     | mean y: 2988845.992366412
[2025-11-24 22:21:53] 2025-11-25 03:21:08,897 | INFO     | intersect: -16952212609.854404
[2025-11-24 22:21:53] 2025-11-25 03:21:08,898 | INFO     | chi2: 2.575026927008327
[2025-11-24 22:21:53] 2025-11-25 03:21:08,899 | INFO     | current chi2=2.575026927008327 (change=40.418671300700005 %)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,899 | INFO     | sum of square deviations: 43348999497.992386
[2025-11-24 22:21:53] 2025-11-25 03:21:08,907 | INFO     | sum of deviations: 401001395414.3317
[2025-11-24 22:21:53] 2025-11-25 03:21:08,907 | INFO     | mean x: 1764025007.0038536
[2025-11-24 22:21:53] 2025-11-25 03:21:08,907 | INFO     | mean y: 2992195.8342967243
[2025-11-24 22:21:53] 2025-11-25 03:21:08,908 | INFO     | intersect: -16315181177.165514
[2025-11-24 22:21:53] 2025-11-25 03:21:08,909 | INFO     | chi2: 2.5546593094630046
[2025-11-24 22:21:53] 2025-11-25 03:21:08,909 | INFO     | current chi2=2.5546593094630046 (change=0.7909671674379495 %)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,909 | INFO     | left removable region: 20
[2025-11-24 22:21:53] 2025-11-25 03:21:08,910 | INFO     | sum of square deviations: 38297014664.492
[2025-11-24 22:21:53] 2025-11-25 03:21:08,916 | INFO     | sum of deviations: 523263455829.1302
[2025-11-24 22:21:53] 2025-11-25 03:21:08,917 | INFO     | mean x: 1764024976.5040162
[2025-11-24 22:21:53] 2025-11-25 03:21:08,917 | INFO     | mean y: 3015318.684738956
[2025-11-24 22:21:53] 2025-11-25 03:21:08,917 | INFO     | intersect: -24099380480.594616
[2025-11-24 22:21:53] 2025-11-25 03:21:08,918 | INFO     | chi2: 0.050020425304578876
[2025-11-24 22:21:53] 2025-11-25 03:21:08,918 | INFO     | current memory leak: 13.66 B/s (using 498 data points, chi2=0.05)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,919 | INFO     | could have reported an average CPU frequency of 2614 MHz (21 samples)
[2025-11-24 22:21:53] 2025-11-25 03:21:08,919 | INFO     | ..............................
[2025-11-24 22:21:53] 2025-11-25 03:21:08,919 | INFO     | . Timing measurements:
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . get job = 0 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . initial setup = 2 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . payload setup = 5 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . stage-in = 0 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . payload execution = 32262 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . stage-out = 4 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | . log creation = 0 s
[2025-11-24 22:21:53] 2025-11-25 03:21:08,920 | INFO     | ..............................
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | 
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | job summary report
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | --------------------------------------------------
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | PanDA job id: 6895328687
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | task id: 47556137
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | errors: (none)
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:21:53] 2025-11-25 03:21:09,028 | INFO     | pilot state: finished 
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | transexitcode: 0
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | exeerrorcode: 0
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | exeerrordiag: 
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | exitcode: 0
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | exitmsg: OK
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | cpuconsumptiontime: 252808 s
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | nevents: 1000
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | neventsw: 0
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | pid: 746655
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | pgrp: 746655
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | corecount: 8
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | event service: False
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | sizes: {0: 2284306, 4: 2284568, 11: 2284596, 32271: 2323952, 32275: 2332974, 32276: 2333030, 32280: 2333404}
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | --------------------------------------------------
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | 
[2025-11-24 22:21:53] 2025-11-25 03:21:09,029 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 22:21:53] 2025-11-25 03:21:09,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | job 6895328687 has completed (purged errors)
[2025-11-24 22:21:53] 2025-11-25 03:21:09,047 | INFO     | overall cleanup function is called
[2025-11-24 22:21:53] 2025-11-25 03:21:10,059 | INFO     | --- collectZombieJob: --- 10, [746655]
[2025-11-24 22:21:53] 2025-11-25 03:21:10,059 | INFO     | zombie collector waiting for pid 746655
[2025-11-24 22:21:53] 2025-11-25 03:21:10,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:21:53] 2025-11-25 03:21:10,060 | INFO     | collected zombie processes
[2025-11-24 22:21:53] 2025-11-25 03:21:10,060 | INFO     | will attempt to kill all subprocesses of pid=746655
[2025-11-24 22:21:53] 2025-11-25 03:21:10,453 | INFO     | process IDs to be killed: [746655] (in reverse order)
[2025-11-24 22:21:53] 2025-11-25 03:21:10,576 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:21:53] 2025-11-25 03:21:10,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:21:53] 2025-11-25 03:21:10,585 | INFO     | did not find any defunct processes belonging to 746655
[2025-11-24 22:21:53] 2025-11-25 03:21:10,594 | INFO     | did not find any defunct processes belonging to 746655
[2025-11-24 22:21:53] 2025-11-25 03:21:10,595 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:21:53] 2025-11-25 03:21:10,596 | INFO     | ready for new job
[2025-11-24 22:21:53] 2025-11-25 03:21:10,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:21:53] 2025-11-25 03:21:10,598 | INFO     | ***************************************
[2025-11-24 22:21:53] 2025-11-25 03:21:10,598 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:21:53] 2025-11-25 03:21:10,598 | INFO     | ***************************************
[2025-11-24 22:21:53] 2025-11-25 03:21:10,598 | INFO     | 
[2025-11-24 22:21:53] 2025-11-25 03:21:10,600 | INFO     | architecture information:
[2025-11-24 22:21:53] 2025-11-25 03:21:10,600 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:21:53] 2025-11-25 03:21:10,610 | INFO     | cat /etc/os-release:
[2025-11-24 22:21:53] NAME="CentOS Linux"
[2025-11-24 22:21:53] VERSION="7 (Core)"
[2025-11-24 22:21:53] ID="centos"
[2025-11-24 22:21:53] ID_LIKE="rhel fedora"
[2025-11-24 22:21:53] VERSION_ID="7"
[2025-11-24 22:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:21:53] ANSI_COLOR="0;31"
[2025-11-24 22:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:21:53] HOME_URL="https://www.centos.org/"
[2025-11-24 22:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:21:53] 
[2025-11-24 22:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:21:53] 
[2025-11-24 22:21:53] 2025-11-25 03:21:10,610 | INFO     | ***************************************
[2025-11-24 22:21:53] 2025-11-25 03:21:11,112 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 22:21:53] 2025-11-25 03:21:11,125 | INFO     | sufficient remaining disk space (72362229760 B)
[2025-11-24 22:21:53] 2025-11-25 03:21:11,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:21:53] 2025-11-25 03:21:11,126 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:21:53] 2025-11-25 03:21:11,126 | INFO     | update_server=False
[2025-11-24 22:21:53] 2025-11-25 03:21:11,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:21:53] 2025-11-25 03:21:11,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:21:53] 2025-11-25 03:21:11,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:21:53] 2025-11-25 03:21:11,127 | INFO     | aborting loop
[2025-11-24 22:21:53] 2025-11-25 03:21:11,424 | INFO     | all job control threads have been joined
[2025-11-24 22:21:53] 2025-11-25 03:21:11,848 | INFO     | all data control threads have been joined
[2025-11-24 22:21:53] 2025-11-25 03:21:12,131 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,132 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,206 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,341 | INFO     | all payload control threads have been joined
[2025-11-24 22:21:53] 2025-11-25 03:21:12,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:21:53] 2025-11-25 03:21:12,429 | INFO     | [job] control thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,565 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,604 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,853 | INFO     | [data] control thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:12,928 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:13,233 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:13,307 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:13,345 | INFO     | [payload] control thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:13,527 | INFO     | [job] validate thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:14,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:21:53] 2025-11-25 03:21:14,428 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:15,043 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:15,128 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:21:53] 2025-11-25 03:21:42,183 | INFO     | PID=740215 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 22:21:53] 2025-11-25 03:21:42,184 | INFO     | .. there are 39 such processes running
[2025-11-24 22:21:53] 2025-11-25 03:21:42,185 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:21:53] 2025-11-25 03:21:42,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:21:53] 2025-11-25 03:21:42,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:21:53] 2025-11-25 03:21:46,601 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:21:53] 2025-11-25 03:21:47,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593202693952)>', '<ExcThread(monitor, started 140592700962560)>']
[2025-11-24 22:21:53] 2025-11-25 03:21:48,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:21:53] 2025-11-25 03:21:48,212 | INFO     | [monitor] control thread has ended
[2025-11-24 22:21:53] 2025-11-25 03:21:52,991 | INFO     | all workflow threads have been joined
[2025-11-24 22:21:53] 2025-11-25 03:21:52,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:21:53] 2025-11-25 03:21:52,991 | INFO     | traces error code: 0
[2025-11-24 22:21:53] 2025-11-25 03:21:52,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:21:53] 2025-11-25 03:21:53,116 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:21:53] 2025-11-25 03:21:53,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:21:53] 2025-11-25 03:21:53,119 [wrapper] pilotpid: 740215
[2025-11-24 22:21:53] 2025-11-25 03:21:53,121 [wrapper] Pilot exit status: 0
[2025-11-24 22:21:53] 2025-11-25 03:21:53,128 [wrapper] pandaids: 6895328687
[2025-11-24 22:21:53] 2025-11-25 03:21:53,188 [wrapper] cleanup supervisor_pilot 2596577 740216
[2025-11-24 22:21:53] 2025-11-25 03:21:53,191 [wrapper] Test setup, not cleaning
[2025-11-24 22:21:53] 2025-11-25 03:21:53,193 [wrapper] apfmon messages muted
[2025-11-24 22:21:53] 2025-11-25 03:21:53,195 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:21:53] 2025-11-25 03:21:53,198 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:21:53]  *** Error codes and diagnostics ***
[2025-11-24 22:21:53]     "exeErrorCode": 0,
[2025-11-24 22:21:53]     "exeErrorDiag": "",
[2025-11-24 22:21:53]     "pilotErrorCode": 0,
[2025-11-24 22:21:53]     "pilotErrorDiag": "",
[2025-11-24 22:21:53]  *** Listing of results directory ***
[2025-11-24 22:21:53] total 1306200
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 12:05 pilot3.tar.gz
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 12:54 queuedata.json
[2025-11-24 22:21:53] -rwx------. 1 boincer umatlas     36292 Nov 21 12:54 runpilot2-wrapper.sh
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas       100 Nov 24 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:21:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 13:22 run_atlas
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas       105 Nov 24 13:22 job.xml
[2025-11-24 22:21:53] -rw-r--r--. 2 boincer umatlas 409701659 Nov 24 13:22 EVNT.47483658._000086.pool.root.1
[2025-11-24 22:21:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 13:22 start_atlas.sh
[2025-11-24 22:21:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 13:22 shared
[2025-11-24 22:21:53] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 13:22 input.tar.gz
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas         0 Nov 24 13:22 boinc_lockfile
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 13:22 pandaJob.out
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas        57 Nov 24 13:22 setup.sh.local
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas    991801 Nov 24 13:22 agis_schedconf.cvmfs.json
[2025-11-24 22:21:53] drwx------. 5 boincer umatlas      4096 Nov 24 13:22 pilot3
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas       532 Nov 24 22:13 boinc_task_state.xml
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas 911313062 Nov 24 22:20 HITS.47556137._000858.pool.root.1
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas      1056 Nov 24 22:20 memory_monitor_summary.json
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas   1516227 Nov 24 22:21 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas   1818161 Nov 24 22:21 log.47556137._000858.job.log.tgz.1
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas      8612 Nov 24 22:21 heartbeat.json
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas      6705 Nov 24 22:21 init_data.xml
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas        95 Nov 24 22:21 pilot_heartbeat.json
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas        29 Nov 24 22:21 wrapper_checkpoint.txt
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 22:21 boinc_mmap_file
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas      4823 Nov 24 22:21 pilotlog.txt
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas   4489822 Nov 24 22:21 log.47556137._000858.job.log.1
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas       353 Nov 24 22:21 output.list
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas       620 Nov 24 22:21 runtime_log
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas   6328320 Nov 24 22:21 result.tar.gz
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas      9328 Nov 24 22:21 runtime_log.err
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas       656 Nov 24 22:21 7irKDm4Vkg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjbJKDmVkDIon.diag
[2025-11-24 22:21:53] -rw-r--r--. 1 boincer umatlas     21314 Nov 24 22:21 stderr.txt
[2025-11-24 22:21:53] HITS file was successfully produced:
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas 911313062 Nov 24 22:20 shared/HITS.pool.root.1
[2025-11-24 22:21:53]  *** Contents of shared directory: ***
[2025-11-24 22:21:53] total 1296836
[2025-11-24 22:21:53] -rw-r--r--. 2 boincer umatlas 409701659 Nov 24 13:22 ATLAS.root_0
[2025-11-24 22:21:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 13:22 start_atlas.sh
[2025-11-24 22:21:53] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 13:22 input.tar.gz
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas 911313062 Nov 24 22:20 HITS.pool.root.1
[2025-11-24 22:21:53] -rw-------. 1 boincer umatlas   6328320 Nov 24 22:21 result.tar.gz
22:21:54 (736121): run_atlas exited; CPU time 253411.923231
22:21:54 (736121): called boinc_finish(0)

</stderr_txt>
]]>

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