Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:55:25 (3708535): wrapper (7.7.26015): starting
19:55:25 (3708535): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 19:55:25] Arguments: --nthreads 8
[2025-11-23 19:55:25] Threads: 8
[2025-11-23 19:55:25] Checking for CVMFS
[2025-11-23 19:55:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 19:55:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 19:55:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 19:55:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 19:55:25] 2.13.2.0 6884 30771 264636 153227 2 603 33627307 40960001 28392 16776704 0 177219226 99.696 143480890 38281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 19:55:25] CVMFS is ok
[2025-11-23 19:55:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:55:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:55:25] Further information can be found at the LHC@home message board.
[2025-11-23 19:55:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:55:25] Checking for apptainer binary...
[2025-11-23 19:55:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 19:55:25] Running /usr/bin/apptainer --version
[2025-11-23 19:55:25] apptainer version 1.4.4-1.el9
[2025-11-23 19:55:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:55:25] c-212-8.aglt2.org
[2025-11-23 19:55:25] apptainer works
[2025-11-23 19:55:26] Set ATHENA_PROC_NUMBER=8
[2025-11-23 19:55:26] Set ATHENA_CORE_NUMBER=8
[2025-11-23 19:55:26] Starting ATLAS job with PandaID=6895346859
[2025-11-23 19:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:00:12 (3708535): BOINC client no longer exists - exiting
02:00:12 (3708535): timer handler: client dead, exiting
02:11:49 (1117281): wrapper (7.7.26015): starting
02:11:49 (1117281): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 02:11:49] Arguments: --nthreads 9
[2025-11-24 02:11:49] Threads: 9
[2025-11-24 02:11:49] This job has been restarted, cleaning up previous attempt
[2025-11-24 02:11:49] Checking for CVMFS
[2025-11-24 02:11:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:11:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:11:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:11:50] 2.13.2.0 6884 31148 246308 153236 3 558 21073292 40960001 25308 16776704 0 179901113 99.695 146127591 38193 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 02:11:50] CVMFS is ok
[2025-11-24 02:11:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:11:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:11:50] Further information can be found at the LHC@home message board.
[2025-11-24 02:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:11:50] Checking for apptainer binary...
[2025-11-24 02:11:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:11:50] Running /usr/bin/apptainer --version
[2025-11-24 02:11:50] apptainer version 1.4.4-1.el9
[2025-11-24 02:11:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:11:51] c-212-8.aglt2.org
[2025-11-24 02:11:51] apptainer works
[2025-11-24 02:11:51] Set ATHENA_PROC_NUMBER=9
[2025-11-24 02:11:51] Set ATHENA_CORE_NUMBER=9
[2025-11-24 02:11:51] Starting ATLAS job with PandaID=6895346859
[2025-11-24 02:11:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:00:05 (1117281): BOINC client no longer exists - exiting
06:00:05 (1117281): timer handler: client dead, exiting
06:12:39 (2048856): wrapper (7.7.26015): starting
06:12:39 (2048856): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 06:12:39] Arguments: --nthreads 8
[2025-11-24 06:12:39] Threads: 8
[2025-11-24 06:12:39] This job has been restarted, cleaning up previous attempt
[2025-11-24 06:12:39] Checking for CVMFS
[2025-11-24 06:12:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:12:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:12:40] 2.13.2.0 6884 31389 250024 153243 2 374 25186860 40960000 25777 16776704 0 181296813 99.694 147578542 37950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 06:12:40] CVMFS is ok
[2025-11-24 06:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:12:40] Further information can be found at the LHC@home message board.
[2025-11-24 06:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:12:40] Checking for apptainer binary...
[2025-11-24 06:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:12:40] Running /usr/bin/apptainer --version
[2025-11-24 06:12:40] apptainer version 1.4.4-1.el9
[2025-11-24 06:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:12:40] c-212-8.aglt2.org
[2025-11-24 06:12:40] apptainer works
[2025-11-24 06:12:40] Set ATHENA_PROC_NUMBER=8
[2025-11-24 06:12:40] Set ATHENA_CORE_NUMBER=8
[2025-11-24 06:12:40] Starting ATLAS job with PandaID=6895346859
[2025-11-24 06:12:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:40:14 (2048856): BOINC client no longer exists - exiting
22:40:14 (2048856): timer handler: client dead, exiting
22:49:05 (1828955): wrapper (7.7.26015): starting
22:49:05 (1828955): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:49:05] Arguments: --nthreads 8
[2025-11-24 22:49:05] Threads: 8
[2025-11-24 22:49:05] This job has been restarted, cleaning up previous attempt
[2025-11-24 22:49:06] Checking for CVMFS
[2025-11-24 22:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:49:06] 2.13.2.0 6884 32385 242600 153268 0 484 40455784 40960000 28146 16776704 0 187149919 99.696 150549977 37811 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 22:49:06] CVMFS is ok
[2025-11-24 22:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:49:06] Further information can be found at the LHC@home message board.
[2025-11-24 22:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:49:06] Checking for apptainer binary...
[2025-11-24 22:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:49:06] Running /usr/bin/apptainer --version
[2025-11-24 22:49:06] apptainer version 1.4.4-1.el9
[2025-11-24 22:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:49:07] c-212-8.aglt2.org
[2025-11-24 22:49:07] apptainer works
[2025-11-24 22:49:07] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:49:07] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:49:07] Starting ATLAS job with PandaID=6895346859
[2025-11-24 22:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:42:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:42:52] 2025-11-26 20:41:33,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:42:52] 2025-11-26 20:41:34,815 | INFO     | time since job start (147129s) is within the limit (172800.0s)
[2025-11-26 15:42:52] 2025-11-26 20:41:35,692 | INFO     | monitor loop #8956: job 0:6895346859 is in state 'finished'
[2025-11-26 15:42:52] 2025-11-26 20:41:35,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:42:52] 2025-11-26 20:41:36,833 | INFO     | time since job start (147131s) is within the limit (172800.0s)
[2025-11-26 15:42:52] 2025-11-26 20:41:38,205 | INFO     | monitor loop #8957: job 0:6895346859 is in state 'finished'
[2025-11-26 15:42:52] 2025-11-26 20:41:38,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:42:52] 2025-11-26 20:41:39,657 | INFO     | PID=1851432 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 15:42:52] 2025-11-26 20:41:39,657 | INFO     | .. there are 38 such processes running
[2025-11-26 15:42:52] 2025-11-26 20:41:40,679 | INFO     | time since job start (147135s) is within the limit (172800.0s)
[2025-11-26 15:42:52] 2025-11-26 20:41:40,712 | INFO     | monitor loop #8958: job 0:6895346859 is in state 'finished'
[2025-11-26 15:42:52] 2025-11-26 20:41:40,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:42:52] 2025-11-26 20:41:42,700 | INFO     | time since job start (147137s) is within the limit (172800.0s)
[2025-11-26 15:42:52] 2025-11-26 20:41:42,816 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 15:42:52] 2025-11-26 20:41:42,840 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3110.969947916666
[2025-11-26 15:42:52] 2025-11-26 20:41:42,854 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346859/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 15:42:52] 2025-11-26 20:41:42,855 | INFO     | extracted standard info from prmon json
[2025-11-26 15:42:52] 2025-11-26 20:41:42,855 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:42:52] 2025-11-26 20:41:42,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:42:52] 2025-11-26 20:41:42,887 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:42:52] 2025-11-26 20:41:42,890 | INFO     | sum of square deviations: 4345996637733.425
[2025-11-26 15:42:52] 2025-11-26 20:41:43,239 | INFO     | monitor loop #8959: job 0:6895346859 is in state 'finished'
[2025-11-26 15:42:52] 2025-11-26 20:41:43,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:42:52] 2025-11-26 20:41:43,487 | INFO     | sum of deviations: 21856233760784.316
[2025-11-26 15:42:52] 2025-11-26 20:41:43,492 | INFO     | mean x: 1764116110.5371215
[2025-11-26 15:42:52] 2025-11-26 20:41:43,492 | INFO     | mean y: 2985538.8291165493
[2025-11-26 15:42:52] 2025-11-26 20:41:43,492 | INFO     | intersect: -8868842331.054745
[2025-11-26 15:42:52] 2025-11-26 20:41:43,506 | INFO     | chi2: 19.14331037278534
[2025-11-26 15:42:52] 2025-11-26 20:41:43,508 | INFO     | sum of square deviations: 4319017188193.676
[2025-11-26 15:42:52] 2025-11-26 20:41:43,823 | INFO     | sum of deviations: 22675544456349.047
[2025-11-26 15:42:52] 2025-11-26 20:41:43,831 | INFO     | mean x: 1764115958.042394
[2025-11-26 15:42:52] 2025-11-26 20:41:43,832 | INFO     | mean y: 2990169.3133832086
[2025-11-26 15:42:52] 2025-11-26 20:41:43,832 | INFO     | intersect: -9258906250.569838
[2025-11-26 15:42:52] 2025-11-26 20:41:43,834 | INFO     | chi2: 15.915706641826043
[2025-11-26 15:42:52] 2025-11-26 20:41:43,834 | INFO     | current chi2=15.915706641826043 (change=16.860217319297856 %)
[2025-11-26 15:42:52] 2025-11-26 20:41:43,834 | INFO     | right removable region: 2405
[2025-11-26 15:42:52] 2025-11-26 20:41:43,859 | INFO     | sum of square deviations: 4319013603654.7666
[2025-11-26 15:42:52] 2025-11-26 20:41:44,376 | INFO     | sum of deviations: 21124538685470.594
[2025-11-26 15:42:52] 2025-11-26 20:41:44,376 | INFO     | mean x: 1764116263.0419784
[2025-11-26 15:42:52] 2025-11-26 20:41:44,376 | INFO     | mean y: 2989672.34081463
[2025-11-26 15:42:52] 2025-11-26 20:41:44,376 | INFO     | intersect: -8625402285.666294
[2025-11-26 15:42:52] 2025-11-26 20:41:44,378 | INFO     | chi2: 16.80237960632888
[2025-11-26 15:42:52] 2025-11-26 20:41:44,378 | INFO     | current chi2=16.80237960632888 (change=12.228453286660343 %)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,378 | INFO     | left removable region: 10
[2025-11-26 15:42:52] 2025-11-26 20:41:44,393 | INFO     | sum of square deviations: 4260049115066.1846
[2025-11-26 15:42:52] 2025-11-26 20:41:44,767 | INFO     | time since job start (147139s) is within the limit (172800.0s)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,774 | INFO     | 147141s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 15:42:52] 2025-11-26 20:41:44,788 | INFO     | sum of deviations: 21822843503410.1
[2025-11-26 15:42:52] 2025-11-26 20:41:44,789 | INFO     | mean x: 1764116232.5524008
[2025-11-26 15:42:52] 2025-11-26 20:41:44,789 | INFO     | mean y: 2996761.1624217117
[2025-11-26 15:42:52] 2025-11-26 20:41:44,789 | INFO     | intersect: -9033995870.838806
[2025-11-26 15:42:52] 2025-11-26 20:41:44,791 | INFO     | chi2: 12.902229708873623
[2025-11-26 15:42:52] 2025-11-26 20:41:44,791 | INFO     | current memory leak: 5.12 B/s (using 2395 data points, chi2=12.90)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | could have reported an average CPU frequency of 3139 MHz (84 samples)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | ..............................
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . Timing measurements:
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . get job = 0 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . initial setup = 2 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . payload setup = 9 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . stage-in = 0 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . payload execution = 147078 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . stage-out = 8 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | . log creation = 1 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,793 | INFO     | ..............................
[2025-11-26 15:42:52] 2025-11-26 20:41:44,875 | INFO     | 
[2025-11-26 15:42:52] 2025-11-26 20:41:44,880 | INFO     | job summary report
[2025-11-26 15:42:52] 2025-11-26 20:41:44,880 | INFO     | --------------------------------------------------
[2025-11-26 15:42:52] 2025-11-26 20:41:44,880 | INFO     | PanDA job id: 6895346859
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | task id: 47556137
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | errors: (none)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | pilot state: finished 
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | transexitcode: 0
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | exeerrorcode: 0
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | exeerrordiag: 
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | exitcode: 0
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | exitmsg: OK
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | cpuconsumptiontime: 210627 s
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | nevents: 1000
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | neventsw: 0
[2025-11-26 15:42:52] 2025-11-26 20:41:44,881 | INFO     | pid: 1889963
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | pgrp: 1889963
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | corecount: 8
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | event service: False
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | sizes: {0: 2284037, 1: 2284236, 8: 2284498, 12: 2284526, 147093: 2379294, 147094: 2379293, 147103: 2388476, 147106: 2388532, 147121: 2388778}
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | --------------------------------------------------
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | 
[2025-11-26 15:42:52] 2025-11-26 20:41:44,882 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 15:42:52] 2025-11-26 20:41:44,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,922 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:42:52] 2025-11-26 20:41:44,922 | INFO     | job 6895346859 has completed (purged errors)
[2025-11-26 15:42:52] 2025-11-26 20:41:44,922 | INFO     | overall cleanup function is called
[2025-11-26 15:42:52] 2025-11-26 20:41:45,972 | INFO     | --- collectZombieJob: --- 10, [1889963]
[2025-11-26 15:42:52] 2025-11-26 20:41:45,972 | INFO     | zombie collector waiting for pid 1889963
[2025-11-26 15:42:52] 2025-11-26 20:41:45,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:42:52] 2025-11-26 20:41:45,973 | INFO     | collected zombie processes
[2025-11-26 15:42:52] 2025-11-26 20:41:45,973 | INFO     | will attempt to kill all subprocesses of pid=1889963
[2025-11-26 15:42:52] 2025-11-26 20:41:47,591 | INFO     | process IDs to be killed: [1889963] (in reverse order)
[2025-11-26 15:42:52] 2025-11-26 20:41:47,848 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:42:52] 2025-11-26 20:41:47,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:42:52] 2025-11-26 20:41:47,929 | INFO     | did not find any defunct processes belonging to 1889963
[2025-11-26 15:42:52] 2025-11-26 20:41:47,953 | INFO     | did not find any defunct processes belonging to 1889963
[2025-11-26 15:42:52] 2025-11-26 20:41:47,955 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:42:52] 2025-11-26 20:41:47,955 | INFO     | ready for new job
[2025-11-26 15:42:52] 2025-11-26 20:41:47,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:42:52] 2025-11-26 20:41:47,998 | INFO     | ***************************************
[2025-11-26 15:42:52] 2025-11-26 20:41:47,999 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:42:52] 2025-11-26 20:41:47,999 | INFO     | ***************************************
[2025-11-26 15:42:52] 2025-11-26 20:41:47,999 | INFO     | 
[2025-11-26 15:42:52] 2025-11-26 20:41:48,004 | INFO     | architecture information:
[2025-11-26 15:42:52] 2025-11-26 20:41:48,004 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:42:52] 2025-11-26 20:41:48,026 | INFO     | cat /etc/os-release:
[2025-11-26 15:42:52] NAME="CentOS Linux"
[2025-11-26 15:42:52] VERSION="7 (Core)"
[2025-11-26 15:42:52] ID="centos"
[2025-11-26 15:42:52] ID_LIKE="rhel fedora"
[2025-11-26 15:42:52] VERSION_ID="7"
[2025-11-26 15:42:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:42:52] ANSI_COLOR="0;31"
[2025-11-26 15:42:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:42:52] HOME_URL="https://www.centos.org/"
[2025-11-26 15:42:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:42:52] 
[2025-11-26 15:42:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:42:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:42:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:42:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:42:52] 
[2025-11-26 15:42:52] 2025-11-26 20:41:48,030 | INFO     | ***************************************
[2025-11-26 15:42:52] 2025-11-26 20:41:48,539 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 15:42:52] 2025-11-26 20:41:48,637 | INFO     | sufficient remaining disk space (120608260096 B)
[2025-11-26 15:42:52] 2025-11-26 20:41:48,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:42:52] 2025-11-26 20:41:48,637 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:42:52] 2025-11-26 20:41:48,637 | INFO     | update_server=False
[2025-11-26 15:42:52] 2025-11-26 20:41:48,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:42:52] 2025-11-26 20:41:48,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:42:52] 2025-11-26 20:41:48,952 | INFO     | all job control threads have been joined
[2025-11-26 15:42:52] 2025-11-26 20:41:49,171 | INFO     | all data control threads have been joined
[2025-11-26 15:42:52] 2025-11-26 20:41:49,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:42:52] 2025-11-26 20:41:49,343 | INFO     | aborting loop
[2025-11-26 15:42:52] 2025-11-26 20:41:49,456 | INFO     | all payload control threads have been joined
[2025-11-26 15:42:52] 2025-11-26 20:41:49,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:42:52] 2025-11-26 20:41:49,643 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:49,704 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:49,748 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:49,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:49,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:42:52] 2025-11-26 20:41:49,935 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:49,980 | INFO     | [job] control thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:49,999 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,178 | INFO     | [data] control thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,203 | INFO     | [job] validate thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,312 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,348 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,462 | INFO     | [payload] control thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,673 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,806 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:50,915 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:41:53,539 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:42:52] 2025-11-26 20:42:18,508 | INFO     | PID=1851432 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:42:52] 2025-11-26 20:42:18,508 | INFO     | .. there are 38 such processes running
[2025-11-26 15:42:52] 2025-11-26 20:42:18,509 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:42:52] 2025-11-26 20:42:18,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:42:52] 2025-11-26 20:42:18,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:42:52] 2025-11-26 20:42:44,205 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:42:52] 2025-11-26 20:42:45,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298714654528)>', '<ExcThread(monitor, started 140298210481920)>']
[2025-11-26 15:42:52] 2025-11-26 20:42:45,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:42:52] 2025-11-26 20:42:45,682 | INFO     | [monitor] control thread has ended
[2025-11-26 15:42:52] 2025-11-26 20:42:50,398 | INFO     | all workflow threads have been joined
[2025-11-26 15:42:52] 2025-11-26 20:42:50,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:42:52] 2025-11-26 20:42:50,399 | INFO     | traces error code: 0
[2025-11-26 15:42:52] 2025-11-26 20:42:50,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:42:52] 2025-11-26 20:42:51,590 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:42:52] 2025-11-26 20:42:51,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:42:52] 2025-11-26 20:42:51,596 [wrapper] pilotpid: 1851432
[2025-11-26 15:42:52] 2025-11-26 20:42:51,598 [wrapper] Pilot exit status: 0
[2025-11-26 15:42:52] 2025-11-26 20:42:51,657 [wrapper] pandaids: 6895346859 6895346859 6895346859 6895346859
[2025-11-26 15:42:52] 2025-11-26 20:42:51,859 [wrapper] cleanup supervisor_pilot 4152856 1851433
[2025-11-26 15:42:52] 2025-11-26 20:42:51,862 [wrapper] Test setup, not cleaning
[2025-11-26 15:42:52] 2025-11-26 20:42:51,864 [wrapper] apfmon messages muted
[2025-11-26 15:42:52] 2025-11-26 20:42:51,866 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:42:52] 2025-11-26 20:42:51,868 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:42:52]  *** Error codes and diagnostics ***
[2025-11-26 15:42:52]     "exeErrorCode": 0,
[2025-11-26 15:42:52]     "exeErrorDiag": "",
[2025-11-26 15:42:52]     "pilotErrorCode": 0,
[2025-11-26 15:42:52]     "pilotErrorDiag": "",
[2025-11-26 15:42:52]  *** Listing of results directory ***
[2025-11-26 15:42:52] total 1736848
[2025-11-26 15:42:52] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 13:28 pilot3.tar.gz
[2025-11-26 15:42:52] -rwx------. 1 boincer umatlas     36292 Nov 22 13:34 runpilot2-wrapper.sh
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 13:34 queuedata.json
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas       100 Nov 23 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:42:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 19:55 run_atlas
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas       105 Nov 23 19:55 job.xml
[2025-11-26 15:42:52] -rw-r--r--. 3 boincer umatlas 410498425 Nov 23 19:55 EVNT.47483658._000463.pool.root.1
[2025-11-26 15:42:52] -rw-r--r--. 3 boincer umatlas 410498425 Nov 23 19:55 ATLAS.root_0
[2025-11-26 15:42:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 19:55 start_atlas.sh
[2025-11-26 15:42:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 19:55 shared
[2025-11-26 15:42:52] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 19:55 input.tar.gz
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas         0 Nov 23 19:55 boinc_lockfile
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 22:49 pandaJob.out
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas        57 Nov 24 22:49 setup.sh.local
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas    991801 Nov 24 22:49 agis_schedconf.cvmfs.json
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas       534 Nov 26 15:11 boinc_task_state.xml
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 15:37 init_data.xml
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas 909845589 Nov 26 15:40 HITS.47556137._004586.pool.root.1
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas      1079 Nov 26 15:41 memory_monitor_summary.json
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas   1516240 Nov 26 15:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas   3187842 Nov 26 15:41 log.47556137._004586.job.log.tgz.1
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas      8638 Nov 26 15:41 heartbeat.json
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas        96 Nov 26 15:42 pilot_heartbeat.json
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 15:42 boinc_mmap_file
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas        30 Nov 26 15:42 wrapper_checkpoint.txt
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas      4825 Nov 26 15:42 pilotlog.txt
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas  18687892 Nov 26 15:42 log.47556137._004586.job.log.1
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas       353 Nov 26 15:42 output.list
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas       620 Nov 26 15:42 runtime_log
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas  21893120 Nov 26 15:42 result.tar.gz
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas      1044 Nov 26 15:42 yw4NDmGc7g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7KKKDm9LhITo.diag
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas      9424 Nov 26 15:42 runtime_log.err
[2025-11-26 15:42:52] -rw-r--r--. 1 boincer umatlas     28743 Nov 26 15:42 stderr.txt
[2025-11-26 15:42:52] HITS file was successfully produced:
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas 909845589 Nov 26 15:40 shared/HITS.pool.root.1
[2025-11-26 15:42:52]  *** Contents of shared directory: ***
[2025-11-26 15:42:52] total 1311388
[2025-11-26 15:42:52] -rw-r--r--. 3 boincer umatlas 410498425 Nov 23 19:55 ATLAS.root_0
[2025-11-26 15:42:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 19:55 start_atlas.sh
[2025-11-26 15:42:52] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 19:55 input.tar.gz
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas 909845589 Nov 26 15:40 HITS.pool.root.1
[2025-11-26 15:42:52] -rw-------. 1 boincer umatlas  21893120 Nov 26 15:42 result.tar.gz
15:42:53 (1828955): run_atlas exited; CPU time 213482.439066
15:42:53 (1828955): called boinc_finish(0)

</stderr_txt>
]]>

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