Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:04:17 (1053487): wrapper (7.7.26015): starting
05:04:17 (1053487): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:04:17] Arguments: --nthreads 8
[2025-11-24 05:04:17] Threads: 8
[2025-11-24 05:04:17] Checking for CVMFS
[2025-11-24 05:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:04:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:04:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:04:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:04:20] 2.13.3.0 11600 26979 338700 153240 0 390 18351702 32935936 19121 16776704 0 109986965 99.617 104670891 38687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 05:04:20] CVMFS is ok
[2025-11-24 05:04:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:04:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:04:20] Further information can be found at the LHC@home message board.
[2025-11-24 05:04:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:04:20] Checking for apptainer binary...
[2025-11-24 05:04:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:04:20] Running /usr/bin/apptainer --version
[2025-11-24 05:04:20] apptainer version 1.4.4-1.el9
[2025-11-24 05:04:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:04:21] c6-2-29-4.aglt2.org
[2025-11-24 05:04:21] apptainer works
[2025-11-24 05:04:21] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:04:21] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:04:21] Starting ATLAS job with PandaID=6895337283
[2025-11-24 05:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:40:05 (1053487): BOINC client no longer exists - exiting
05:40:05 (1053487): timer handler: client dead, exiting
05:49:23 (1251590): wrapper (7.7.26015): starting
05:49:23 (1251590): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:49:23] Arguments: --nthreads 8
[2025-11-25 05:49:23] Threads: 8
[2025-11-25 05:49:23] This job has been restarted, cleaning up previous attempt
[2025-11-25 05:49:23] Checking for CVMFS
[2025-11-25 05:49:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:49:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:49:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:49:24] 2.13.3.0 11600 28464 332536 153279 1 129 29038115 32935936 21543 16776704 0 114254687 99.599 115121392 39108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 05:49:24] CVMFS is ok
[2025-11-25 05:49:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:49:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:49:24] Further information can be found at the LHC@home message board.
[2025-11-25 05:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:49:24] Checking for apptainer binary...
[2025-11-25 05:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:49:24] Running /usr/bin/apptainer --version
[2025-11-25 05:49:24] apptainer version 1.4.4-1.el9
[2025-11-25 05:49:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:49:24] c6-2-29-4.aglt2.org
[2025-11-25 05:49:24] apptainer works
[2025-11-25 05:49:24] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:49:24] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:49:24] Starting ATLAS job with PandaID=6895337283
[2025-11-25 05:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:11:32 (2578792): wrapper (7.7.26015): starting
13:11:32 (2578792): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 13:11:32] Arguments: --nthreads 9
[2025-11-25 13:11:32] Threads: 9
[2025-11-25 13:11:32] This job has been restarted, cleaning up previous attempt
[2025-11-25 13:11:32] Checking for CVMFS
[2025-11-25 13:11:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:11:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:11:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:11:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:11:33] 2.13.3.0 11600 28906 328708 153292 0 110 17835663 32935937 21439 16776704 0 115605581 99.599 116790848 39014 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 13:11:33] CVMFS is ok
[2025-11-25 13:11:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:11:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:11:33] Further information can be found at the LHC@home message board.
[2025-11-25 13:11:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:11:33] Checking for apptainer binary...
[2025-11-25 13:11:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:11:33] Running /usr/bin/apptainer --version
[2025-11-25 13:11:33] apptainer version 1.4.4-1.el9
[2025-11-25 13:11:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:11:33] c6-2-29-4.aglt2.org
[2025-11-25 13:11:33] apptainer works
[2025-11-25 13:11:33] Set ATHENA_PROC_NUMBER=9
[2025-11-25 13:11:33] Set ATHENA_CORE_NUMBER=9
[2025-11-25 13:11:33] Starting ATLAS job with PandaID=6895337283
[2025-11-25 13:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:04:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:04:12] 2025-11-26 16:03:06,024 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:04:12] 2025-11-26 16:03:06,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:04:12] 2025-11-26 16:03:06,046 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:04:12] 2025-11-26 16:03:06,048 | INFO     | sum of square deviations: 664102853875.1283
[2025-11-26 11:04:12] 2025-11-26 16:03:06,096 | INFO     | sum of deviations: 4319016509129.692
[2025-11-26 11:04:12] 2025-11-26 16:03:06,097 | INFO     | mean x: 1764133626.9325058
[2025-11-26 11:04:12] 2025-11-26 16:03:06,097 | INFO     | mean y: 3038940.5252133436
[2025-11-26 11:04:12] 2025-11-26 16:03:06,097 | INFO     | intersect: -11470066790.872532
[2025-11-26 11:04:12] 2025-11-26 16:03:06,098 | INFO     | chi2: 10.112340992996895
[2025-11-26 11:04:12] 2025-11-26 16:03:06,102 | INFO     | sum of square deviations: 656405797276.9623
[2025-11-26 11:04:12] 2025-11-26 16:03:06,157 | INFO     | sum of deviations: 4819733226851.804
[2025-11-26 11:04:12] 2025-11-26 16:03:06,158 | INFO     | mean x: 1764133474.4439251
[2025-11-26 11:04:12] 2025-11-26 16:03:06,158 | INFO     | mean y: 3048860.531931464
[2025-11-26 11:04:12] 2025-11-26 16:03:06,158 | INFO     | intersect: -12950299142.565176
[2025-11-26 11:04:12] 2025-11-26 16:03:06,159 | INFO     | chi2: 6.317650058357521
[2025-11-26 11:04:12] 2025-11-26 16:03:06,160 | INFO     | current chi2=6.317650058357521 (change=37.52534588447239 %)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,165 | INFO     | sum of square deviations: 648768462728.46
[2025-11-26 11:04:12] 2025-11-26 16:03:06,218 | INFO     | sum of deviations: 5131870956037.526
[2025-11-26 11:04:12] 2025-11-26 16:03:06,223 | INFO     | mean x: 1764133321.9554338
[2025-11-26 11:04:12] 2025-11-26 16:03:06,223 | INFO     | mean y: 3055089.0617670054
[2025-11-26 11:04:12] 2025-11-26 16:03:06,223 | INFO     | intersect: -13951545169.166756
[2025-11-26 11:04:12] 2025-11-26 16:03:06,225 | INFO     | chi2: 4.511552384127577
[2025-11-26 11:04:12] 2025-11-26 16:03:06,225 | INFO     | current chi2=4.511552384127577 (change=28.588124659432278 %)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,230 | INFO     | sum of square deviations: 641190617667.1161
[2025-11-26 11:04:12] 2025-11-26 16:03:06,284 | INFO     | sum of deviations: 5384827917796.576
[2025-11-26 11:04:12] 2025-11-26 16:03:06,284 | INFO     | mean x: 1764133169.467033
[2025-11-26 11:04:12] 2025-11-26 16:03:06,284 | INFO     | mean y: 3060179.323390895
[2025-11-26 11:04:12] 2025-11-26 16:03:06,284 | INFO     | intersect: -14812430378.258156
[2025-11-26 11:04:12] 2025-11-26 16:03:06,286 | INFO     | chi2: 3.3523436516805822
[2025-11-26 11:04:12] 2025-11-26 16:03:06,286 | INFO     | current chi2=3.3523436516805822 (change=25.694231912839843 %)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,287 | INFO     | sum of square deviations: 633672029530.4261
[2025-11-26 11:04:12] 2025-11-26 16:03:06,344 | INFO     | sum of deviations: 5522919648878.974
[2025-11-26 11:04:12] 2025-11-26 16:03:06,344 | INFO     | mean x: 1764133016.9787233
[2025-11-26 11:04:12] 2025-11-26 16:03:06,344 | INFO     | mean y: 3062978.332545311
[2025-11-26 11:04:12] 2025-11-26 16:03:06,344 | INFO     | intersect: -15372658922.992294
[2025-11-26 11:04:12] 2025-11-26 16:03:06,346 | INFO     | chi2: 2.8606906305593935
[2025-11-26 11:04:12] 2025-11-26 16:03:06,350 | INFO     | current chi2=2.8606906305593935 (change=14.665949323981609 %)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,350 | INFO     | right removable region: 1268
[2025-11-26 11:04:12] 2025-11-26 16:03:06,352 | INFO     | sum of square deviations: 656403569866.8501
[2025-11-26 11:04:12] 2025-11-26 16:03:06,412 | INFO     | sum of deviations: 3940281101850.9976
[2025-11-26 11:04:12] 2025-11-26 16:03:06,413 | INFO     | mean x: 1764133779.4431465
[2025-11-26 11:04:12] 2025-11-26 16:03:06,413 | INFO     | mean y: 3046436.137071651
[2025-11-26 11:04:12] 2025-11-26 16:03:06,413 | INFO     | intersect: -10586754276.992561
[2025-11-26 11:04:12] 2025-11-26 16:03:06,414 | INFO     | chi2: 7.965187920743361
[2025-11-26 11:04:12] 2025-11-26 16:03:06,414 | INFO     | current chi2=7.965187920743361 (change=21.2329971244097 %)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,414 | INFO     | left removable region: 10
[2025-11-26 11:04:12] 2025-11-26 16:03:06,416 | INFO     | sum of square deviations: 617334348316.499
[2025-11-26 11:04:12] 2025-11-26 16:03:06,471 | INFO     | sum of deviations: 4993443311893.287
[2025-11-26 11:04:12] 2025-11-26 16:03:06,472 | INFO     | mean x: 1764133291.499205
[2025-11-26 11:04:12] 2025-11-26 16:03:06,472 | INFO     | mean y: 3073397.2893481716
[2025-11-26 11:04:12] 2025-11-26 16:03:06,472 | INFO     | intersect: -14266502902.406015
[2025-11-26 11:04:12] 2025-11-26 16:03:06,479 | INFO     | chi2: 0.5654942928239207
[2025-11-26 11:04:12] 2025-11-26 16:03:06,479 | INFO     | current memory leak: 8.09 B/s (using 1258 data points, chi2=0.57)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,480 | INFO     | could have reported an average CPU frequency of 2927 MHz (46 samples)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | ..............................
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . Timing measurements:
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . get job = 0 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . initial setup = 2 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . payload setup = 7 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . stage-in = 0 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . payload execution = 78629 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . stage-out = 6 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | . log creation = 1 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,481 | INFO     | ..............................
[2025-11-26 11:04:12] 2025-11-26 16:03:06,700 | INFO     | 
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | job summary report
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | --------------------------------------------------
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | PanDA job id: 6895337283
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | task id: 47556137
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | errors: (none)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:04:12] 2025-11-26 16:03:06,704 | INFO     | pilot state: finished 
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | transexitcode: 0
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | exeerrorcode: 0
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | exeerrordiag: 
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | exitcode: 0
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | exitmsg: OK
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | cpuconsumptiontime: 248186 s
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | nevents: 1000
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | neventsw: 0
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | pid: 2621703
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | pgrp: 2621703
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | corecount: 9
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | event service: False
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | sizes: {0: 2284263, 5: 2284525, 11: 2284581, 78641: 2346831, 78648: 2355825, 78652: 2355881, 78664: 2356255}
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | --------------------------------------------------
[2025-11-26 11:04:12] 2025-11-26 16:03:06,705 | INFO     | 
[2025-11-26 11:04:12] 2025-11-26 16:03:06,706 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 11:04:12] 2025-11-26 16:03:06,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:04:12] 2025-11-26 16:03:06,748 | INFO     | job 6895337283 has completed (purged errors)
[2025-11-26 11:04:12] 2025-11-26 16:03:06,748 | INFO     | overall cleanup function is called
[2025-11-26 11:04:12] 2025-11-26 16:03:07,768 | INFO     | --- collectZombieJob: --- 10, [2621703]
[2025-11-26 11:04:12] 2025-11-26 16:03:07,768 | INFO     | zombie collector waiting for pid 2621703
[2025-11-26 11:04:12] 2025-11-26 16:03:07,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:04:12] 2025-11-26 16:03:07,768 | INFO     | collected zombie processes
[2025-11-26 11:04:12] 2025-11-26 16:03:07,769 | INFO     | will attempt to kill all subprocesses of pid=2621703
[2025-11-26 11:04:12] 2025-11-26 16:03:08,779 | INFO     | process IDs to be killed: [2621703] (in reverse order)
[2025-11-26 11:04:12] 2025-11-26 16:03:08,940 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:04:12] 2025-11-26 16:03:08,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:04:12] 2025-11-26 16:03:08,955 | INFO     | did not find any defunct processes belonging to 2621703
[2025-11-26 11:04:12] 2025-11-26 16:03:08,968 | INFO     | did not find any defunct processes belonging to 2621703
[2025-11-26 11:04:12] 2025-11-26 16:03:08,970 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:04:12] 2025-11-26 16:03:08,970 | INFO     | ready for new job
[2025-11-26 11:04:12] 2025-11-26 16:03:08,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:04:12] 2025-11-26 16:03:08,998 | INFO     | ***************************************
[2025-11-26 11:04:12] 2025-11-26 16:03:08,998 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:04:12] 2025-11-26 16:03:08,998 | INFO     | ***************************************
[2025-11-26 11:04:12] 2025-11-26 16:03:08,998 | INFO     | 
[2025-11-26 11:04:12] 2025-11-26 16:03:09,002 | INFO     | architecture information:
[2025-11-26 11:04:12] 2025-11-26 16:03:09,003 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:04:12] 2025-11-26 16:03:09,023 | INFO     | cat /etc/os-release:
[2025-11-26 11:04:12] NAME="CentOS Linux"
[2025-11-26 11:04:12] VERSION="7 (Core)"
[2025-11-26 11:04:12] ID="centos"
[2025-11-26 11:04:12] ID_LIKE="rhel fedora"
[2025-11-26 11:04:12] VERSION_ID="7"
[2025-11-26 11:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:04:12] ANSI_COLOR="0;31"
[2025-11-26 11:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:04:12] HOME_URL="https://www.centos.org/"
[2025-11-26 11:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:04:12] 
[2025-11-26 11:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:04:12] 
[2025-11-26 11:04:12] 2025-11-26 16:03:09,024 | INFO     | ***************************************
[2025-11-26 11:04:12] 2025-11-26 16:03:09,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 11:04:12] 2025-11-26 16:03:09,547 | INFO     | sufficient remaining disk space (71034732544 B)
[2025-11-26 11:04:12] 2025-11-26 16:03:09,547 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:04:12] 2025-11-26 16:03:09,548 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:04:12] 2025-11-26 16:03:09,548 | INFO     | update_server=False
[2025-11-26 11:04:12] 2025-11-26 16:03:09,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:04:12] 2025-11-26 16:03:09,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:04:12] 2025-11-26 16:03:09,927 | INFO     | all data control threads have been joined
[2025-11-26 11:04:12] 2025-11-26 16:03:10,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:04:12] 2025-11-26 16:03:10,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:04:12] 2025-11-26 16:03:10,350 | INFO     | aborting loop
[2025-11-26 11:04:12] 2025-11-26 16:03:10,554 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:10,684 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:10,734 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:10,900 | INFO     | all job control threads have been joined
[2025-11-26 11:04:12] 2025-11-26 16:03:10,933 | INFO     | [data] control thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:10,973 | INFO     | all payload control threads have been joined
[2025-11-26 11:04:12] 2025-11-26 16:03:11,013 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,014 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,356 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,553 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:04:12] 2025-11-26 16:03:11,740 | INFO     | [job] validate thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,741 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,741 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,913 | INFO     | [job] control thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:11,997 | INFO     | [payload] control thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:12,689 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:14,059 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:04:12] 2025-11-26 16:03:39,518 | INFO     | PID=2593634 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:04:12] 2025-11-26 16:03:39,518 | INFO     | .. there are 31 such processes running
[2025-11-26 11:04:12] 2025-11-26 16:03:39,519 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:04:12] 2025-11-26 16:03:39,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:04:12] 2025-11-26 16:03:39,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:04:12] 2025-11-26 16:04:06,482 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:04:12] 2025-11-26 16:04:06,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890810165056)>', '<ExcThread(monitor, started 139890096334592)>']
[2025-11-26 11:04:12] 2025-11-26 16:04:06,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:04:12] 2025-11-26 16:04:06,688 | INFO     | [monitor] control thread has ended
[2025-11-26 11:04:12] 2025-11-26 16:04:11,594 | INFO     | all workflow threads have been joined
[2025-11-26 11:04:12] 2025-11-26 16:04:11,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:04:12] 2025-11-26 16:04:11,595 | INFO     | traces error code: 0
[2025-11-26 11:04:12] 2025-11-26 16:04:11,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:04:12] 2025-11-26 16:04:11,883 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:04:12] 2025-11-26 16:04:11,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:04:12] 2025-11-26 16:04:11,994 [wrapper] pilotpid: 2593634
[2025-11-26 11:04:12] 2025-11-26 16:04:12,000 [wrapper] Pilot exit status: 0
[2025-11-26 11:04:12] 2025-11-26 16:04:12,068 [wrapper] pandaids: 6895337283 6895337283 6895337283
[2025-11-26 11:04:12] 2025-11-26 16:04:12,143 [wrapper] cleanup supervisor_pilot 2525144 2593635
[2025-11-26 11:04:12] 2025-11-26 16:04:12,160 [wrapper] Test setup, not cleaning
[2025-11-26 11:04:12] 2025-11-26 16:04:12,176 [wrapper] apfmon messages muted
[2025-11-26 11:04:12] 2025-11-26 16:04:12,180 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:04:12] 2025-11-26 16:04:12,183 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:04:12]  *** Error codes and diagnostics ***
[2025-11-26 11:04:12]     "exeErrorCode": 0,
[2025-11-26 11:04:12]     "exeErrorDiag": "",
[2025-11-26 11:04:12]     "pilotErrorCode": 0,
[2025-11-26 11:04:12]     "pilotErrorDiag": "",
[2025-11-26 11:04:12]  *** Listing of results directory ***
[2025-11-26 11:04:12] total 1729548
[2025-11-26 11:04:12] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 01:30 queuedata.json
[2025-11-26 11:04:12] -rwx------. 1 boincer umatlas     36292 Nov 22 01:31 runpilot2-wrapper.sh
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 01:31 pilot3.tar.gz
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas       100 Nov 24 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:04:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 05:04 run_atlas
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas       105 Nov 24 05:04 job.xml
[2025-11-26 11:04:12] -rw-r--r--. 3 boincer umatlas 409107571 Nov 24 05:04 EVNT.47483658._000296.pool.root.1
[2025-11-26 11:04:12] -rw-r--r--. 3 boincer umatlas 409107571 Nov 24 05:04 ATLAS.root_0
[2025-11-26 11:04:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 05:04 start_atlas.sh
[2025-11-26 11:04:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 05:04 shared
[2025-11-26 11:04:12] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 05:04 input.tar.gz
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas         0 Nov 24 05:04 boinc_lockfile
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 13:11 pandaJob.out
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas        57 Nov 25 13:11 setup.sh.local
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas    991543 Nov 25 13:11 agis_schedconf.cvmfs.json
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas       534 Nov 26 10:42 boinc_task_state.xml
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 11:00 init_data.xml
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas 923978420 Nov 26 11:01 HITS.47556137._002925.pool.root.1
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas      1069 Nov 26 11:02 memory_monitor_summary.json
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 11:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas   2477067 Nov 26 11:02 log.47556137._002925.job.log.tgz.1
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas      8649 Nov 26 11:03 heartbeat.json
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas        96 Nov 26 11:03 pilot_heartbeat.json
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas        30 Nov 26 11:04 wrapper_checkpoint.txt
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas      4824 Nov 26 11:04 pilotlog.txt
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas   9991502 Nov 26 11:04 log.47556137._002925.job.log.1
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas       353 Nov 26 11:04 output.list
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 11:04 runtime_log
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas  12492800 Nov 26 11:04 result.tar.gz
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas       915 Nov 26 11:04 XVfKDmZKwg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmP0HKDmmNstIn.diag
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas      9433 Nov 26 11:04 runtime_log.err
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 11:04 boinc_mmap_file
[2025-11-26 11:04:12] -rw-r--r--. 1 boincer umatlas     25571 Nov 26 11:04 stderr.txt
[2025-11-26 11:04:12] HITS file was successfully produced:
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas 923978420 Nov 26 11:01 shared/HITS.pool.root.1
[2025-11-26 11:04:12]  *** Contents of shared directory: ***
[2025-11-26 11:04:12] total 1314644
[2025-11-26 11:04:12] -rw-r--r--. 3 boincer umatlas 409107571 Nov 24 05:04 ATLAS.root_0
[2025-11-26 11:04:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 05:04 start_atlas.sh
[2025-11-26 11:04:12] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 05:04 input.tar.gz
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas 923978420 Nov 26 11:01 HITS.pool.root.1
[2025-11-26 11:04:12] -rw-------. 1 boincer umatlas  12492800 Nov 26 11:04 result.tar.gz
11:04:14 (2578792): run_atlas exited; CPU time 250037.001135
11:04:14 (2578792): called boinc_finish(0)

</stderr_txt>
]]>

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