Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:15 (108863): wrapper (7.7.26015): starting
00:02:15 (108863): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:02:15] Arguments: --nthreads 9
[2025-11-24 00:02:15] Threads: 9
[2025-11-24 00:02:15] Checking for CVMFS
[2025-11-24 00:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:18] 2.13.3.0 9735 26725 309484 153233 2 426 29444327 32935936 20015 16776704 0 122333578 99.769 75088498 32836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:02:18] CVMFS is ok
[2025-11-24 00:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:18] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:18] Checking for apptainer binary...
[2025-11-24 00:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:18] Running /usr/bin/apptainer --version
[2025-11-24 00:02:18] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:20] c-8-15.aglt2.org
[2025-11-24 00:02:20] apptainer works
[2025-11-24 00:02:20] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:02:20] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:02:20] Starting ATLAS job with PandaID=6895346501
[2025-11-24 00:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:14:26]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:14:26] 2025-11-24 21:13:51,204 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1866249999994
[2025-11-24 16:14:26] 2025-11-24 21:13:51,210 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895346501/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,211 | INFO     | extracted standard info from prmon json
[2025-11-24 16:14:26] 2025-11-24 21:13:51,212 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:14:26] 2025-11-24 21:13:51,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:14:26] 2025-11-24 21:13:51,229 | INFO     | fitting pss+swap vs Time
[2025-11-24 16:14:26] 2025-11-24 21:13:51,230 | INFO     | sum of square deviations: 267530460836.56262
[2025-11-24 16:14:26] 2025-11-24 21:13:51,273 | INFO     | sum of deviations: 3013504748357.3813
[2025-11-24 16:14:26] 2025-11-24 21:13:51,273 | INFO     | mean x: 1763989767.6817226
[2025-11-24 16:14:26] 2025-11-24 21:13:51,277 | INFO     | mean y: 3079977.7405462186
[2025-11-24 16:14:26] 2025-11-24 21:13:51,277 | INFO     | intersect: -19866775306.552414
[2025-11-24 16:14:26] 2025-11-24 21:13:51,279 | INFO     | chi2: 12.0735378376902
[2025-11-24 16:14:26] 2025-11-24 21:13:51,280 | INFO     | sum of square deviations: 263337460214.5425
[2025-11-24 16:14:26] 2025-11-24 21:13:51,321 | INFO     | sum of deviations: 3372587451833.8896
[2025-11-24 16:14:26] 2025-11-24 21:13:51,322 | INFO     | mean x: 1763989615.187962
[2025-11-24 16:14:26] 2025-11-24 21:13:51,322 | INFO     | mean y: 3093037.551214361
[2025-11-24 16:14:26] 2025-11-24 21:13:51,322 | INFO     | intersect: -22588486741.874615
[2025-11-24 16:14:26] 2025-11-24 21:13:51,323 | INFO     | chi2: 8.565209678699802
[2025-11-24 16:14:26] 2025-11-24 21:13:51,324 | INFO     | current chi2=8.565209678699802 (change=29.05799614126674 %)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,325 | INFO     | sum of square deviations: 259188391764.7209
[2025-11-24 16:14:26] 2025-11-24 21:13:51,351 | INFO     | sum of deviations: 3506516728514.0293
[2025-11-24 16:14:26] 2025-11-24 21:13:51,352 | INFO     | mean x: 1763989462.6921444
[2025-11-24 16:14:26] 2025-11-24 21:13:51,352 | INFO     | mean y: 3097945.6932059447
[2025-11-24 16:14:26] 2025-11-24 21:13:51,352 | INFO     | intersect: -23861622683.721977
[2025-11-24 16:14:26] 2025-11-24 21:13:51,353 | INFO     | chi2: 7.481738647035308
[2025-11-24 16:14:26] 2025-11-24 21:13:51,353 | INFO     | current chi2=7.481738647035308 (change=12.649673181485552 %)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,353 | INFO     | right removable region: 941
[2025-11-24 16:14:26] 2025-11-24 21:13:51,355 | INFO     | sum of square deviations: 263336773964.54248
[2025-11-24 16:14:26] 2025-11-24 21:13:51,432 | INFO     | sum of deviations: 2609608690002.3525
[2025-11-24 16:14:26] 2025-11-24 21:13:51,432 | INFO     | mean x: 1763989920.187962
[2025-11-24 16:14:26] 2025-11-24 21:13:51,433 | INFO     | mean y: 3094663.329461457
[2025-11-24 16:14:26] 2025-11-24 21:13:51,433 | INFO     | intersect: -17477651969.569164
[2025-11-24 16:14:26] 2025-11-24 21:13:51,434 | INFO     | chi2: 8.032518682679624
[2025-11-24 16:14:26] 2025-11-24 21:13:51,434 | INFO     | current chi2=8.032518682679624 (change=33.47005003285488 %)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,436 | INFO     | sum of square deviations: 259187134429.94894
[2025-11-24 16:14:26] 2025-11-24 21:13:51,468 | INFO     | sum of deviations: 2318627944777.489
[2025-11-24 16:14:26] 2025-11-24 21:13:51,469 | INFO     | mean x: 1763990072.6942675
[2025-11-24 16:14:26] 2025-11-24 21:13:51,469 | INFO     | mean y: 3105352.737791932
[2025-11-24 16:14:26] 2025-11-24 21:13:51,469 | INFO     | intersect: -15777140398.481874
[2025-11-24 16:14:26] 2025-11-24 21:13:51,470 | INFO     | chi2: 6.10367253408467
[2025-11-24 16:14:26] 2025-11-24 21:13:51,470 | INFO     | current chi2=6.10367253408467 (change=24.012968096222302 %)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,470 | INFO     | left removable region: 20
[2025-11-24 16:14:26] 2025-11-24 21:13:51,472 | INFO     | sum of square deviations: 242236303835.38977
[2025-11-24 16:14:26] 2025-11-24 21:13:51,506 | INFO     | sum of deviations: 2556922304990.594
[2025-11-24 16:14:26] 2025-11-24 21:13:51,506 | INFO     | mean x: 1763990042.2073834
[2025-11-24 16:14:26] 2025-11-24 21:13:51,506 | INFO     | mean y: 3133194.9131378937
[2025-11-24 16:14:26] 2025-11-24 21:13:51,506 | INFO     | intersect: -18616641848.246223
[2025-11-24 16:14:26] 2025-11-24 21:13:51,648 | INFO     | monitor loop #3926: job 0:6895346501 is in state 'finished'
[2025-11-24 16:14:26] 2025-11-24 21:13:51,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,649 | INFO     | chi2: 0.8366783633541368
[2025-11-24 16:14:26] 2025-11-24 21:13:51,649 | INFO     | current memory leak: 10.56 B/s (using 921 data points, chi2=0.84)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,650 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2025-11-24 16:14:26] 2025-11-24 21:13:51,650 | INFO     | ..............................
[2025-11-24 16:14:26] 2025-11-24 21:13:51,650 | INFO     | . Timing measurements:
[2025-11-24 16:14:26] 2025-11-24 21:13:51,650 | INFO     | . get job = 0 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,650 | INFO     | . initial setup = 7 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,651 | INFO     | . payload setup = 50 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,651 | INFO     | . stage-in = 0 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,651 | INFO     | . payload execution = 58081 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,651 | INFO     | . stage-out = 5 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,651 | INFO     | . log creation = 1 s
[2025-11-24 16:14:26] 2025-11-24 21:13:51,651 | INFO     | ..............................
[2025-11-24 16:14:26] 2025-11-24 21:13:52,154 | INFO     | 
[2025-11-24 16:14:26] 2025-11-24 21:13:52,154 | INFO     | job summary report
[2025-11-24 16:14:26] 2025-11-24 21:13:52,154 | INFO     | --------------------------------------------------
[2025-11-24 16:14:26] 2025-11-24 21:13:52,154 | INFO     | PanDA job id: 6895346501
[2025-11-24 16:14:26] 2025-11-24 21:13:52,154 | INFO     | task id: 47556137
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | errors: (none)
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | pilot state: finished 
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | transexitcode: 0
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | exeerrorcode: 0
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | exeerrordiag: 
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | exitcode: 0
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | exitmsg: OK
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | cpuconsumptiontime: 298424 s
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | nevents: 1000
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | neventsw: 0
[2025-11-24 16:14:26] 2025-11-24 21:13:52,155 | INFO     | pid: 122779
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | pgrp: 122779
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | corecount: 9
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | event service: False
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | sizes: {0: 2298528, 1: 2298612, 2: 2298811, 13: 2298811, 24: 2298867, 35: 2299313, 58135: 2351536, 58142: 2361321, 58144: 2361377, 58155: 2361623}
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | --------------------------------------------------
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | 
[2025-11-24 16:14:26] 2025-11-24 21:13:52,156 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 16:14:26] 2025-11-24 21:13:52,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:14:26] 2025-11-24 21:13:52,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,278 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:14:26] 2025-11-24 21:13:52,278 | INFO     | job 6895346501 has completed (purged errors)
[2025-11-24 16:14:26] 2025-11-24 21:13:52,278 | INFO     | overall cleanup function is called
[2025-11-24 16:14:26] 2025-11-24 21:13:52,285 | INFO     | PID=114873 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 16:14:26] 2025-11-24 21:13:52,285 | INFO     | .. there are 35 such processes running
[2025-11-24 16:14:26] 2025-11-24 21:13:53,300 | INFO     | --- collectZombieJob: --- 10, [122779]
[2025-11-24 16:14:26] 2025-11-24 21:13:53,304 | INFO     | zombie collector waiting for pid 122779
[2025-11-24 16:14:26] 2025-11-24 21:13:53,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:14:26] 2025-11-24 21:13:53,305 | INFO     | collected zombie processes
[2025-11-24 16:14:26] 2025-11-24 21:13:53,305 | INFO     | will attempt to kill all subprocesses of pid=122779
[2025-11-24 16:14:26] 2025-11-24 21:13:53,965 | INFO     | process IDs to be killed: [122779] (in reverse order)
[2025-11-24 16:14:26] 2025-11-24 21:13:54,226 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:14:26] 2025-11-24 21:13:54,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:14:26] 2025-11-24 21:13:54,323 | INFO     | did not find any defunct processes belonging to 122779
[2025-11-24 16:14:26] 2025-11-24 21:13:54,337 | INFO     | did not find any defunct processes belonging to 122779
[2025-11-24 16:14:26] 2025-11-24 21:13:54,339 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:14:26] 2025-11-24 21:13:54,339 | INFO     | ready for new job
[2025-11-24 16:14:26] 2025-11-24 21:13:54,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:14:26] 2025-11-24 21:13:54,344 | INFO     | ***************************************
[2025-11-24 16:14:26] 2025-11-24 21:13:54,344 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:14:26] 2025-11-24 21:13:54,344 | INFO     | ***************************************
[2025-11-24 16:14:26] 2025-11-24 21:13:54,344 | INFO     | 
[2025-11-24 16:14:26] 2025-11-24 21:13:54,346 | INFO     | architecture information:
[2025-11-24 16:14:26] 2025-11-24 21:13:54,346 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:14:26] 2025-11-24 21:13:54,472 | INFO     | cat /etc/os-release:
[2025-11-24 16:14:26] NAME="CentOS Linux"
[2025-11-24 16:14:26] VERSION="7 (Core)"
[2025-11-24 16:14:26] ID="centos"
[2025-11-24 16:14:26] ID_LIKE="rhel fedora"
[2025-11-24 16:14:26] VERSION_ID="7"
[2025-11-24 16:14:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:14:26] ANSI_COLOR="0;31"
[2025-11-24 16:14:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:14:26] HOME_URL="https://www.centos.org/"
[2025-11-24 16:14:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:14:26] 
[2025-11-24 16:14:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:14:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:14:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:14:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:14:26] 
[2025-11-24 16:14:26] 2025-11-24 21:13:54,472 | INFO     | ***************************************
[2025-11-24 16:14:26] 2025-11-24 21:13:54,975 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 16:14:26] 2025-11-24 21:13:55,083 | INFO     | sufficient remaining disk space (72543633408 B)
[2025-11-24 16:14:26] 2025-11-24 21:13:55,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:14:26] 2025-11-24 21:13:55,084 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:14:26] 2025-11-24 21:13:55,084 | INFO     | update_server=False
[2025-11-24 16:14:26] 2025-11-24 21:13:55,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:14:26] 2025-11-24 21:13:55,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:14:26] 2025-11-24 21:13:55,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:14:26] 2025-11-24 21:13:55,160 | INFO     | aborting loop
[2025-11-24 16:14:26] 2025-11-24 21:13:55,203 | INFO     | all job control threads have been joined
[2025-11-24 16:14:26] 2025-11-24 21:13:56,090 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,153 | INFO     | all data control threads have been joined
[2025-11-24 16:14:26] 2025-11-24 21:13:56,166 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,208 | INFO     | [job] control thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:14:26] 2025-11-24 21:13:56,308 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,417 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,452 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,456 | INFO     | all payload control threads have been joined
[2025-11-24 16:14:26] 2025-11-24 21:13:56,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,686 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:56,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:14:26] 2025-11-24 21:13:57,100 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:57,159 | INFO     | [data] control thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:57,188 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:57,218 | INFO     | [job] validate thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:57,296 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:57,462 | INFO     | [payload] control thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:13:57,923 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:14:00,249 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:14:26] 2025-11-24 21:14:10,356 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:14:26] 2025-11-24 21:14:12,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882882107200)>', '<ExcThread(monitor, started 139882236204800)>']
[2025-11-24 16:14:26] 2025-11-24 21:14:17,241 | INFO     | all workflow threads have been joined
[2025-11-24 16:14:26] 2025-11-24 21:14:17,241 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:14:26] 2025-11-24 21:14:17,242 | INFO     | traces error code: 0
[2025-11-24 16:14:26] 2025-11-24 21:14:17,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:14:26] 2025-11-24 21:14:24,950 | INFO     | PID=114873 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 16:14:26] 2025-11-24 21:14:24,950 | INFO     | .. there are 35 such processes running
[2025-11-24 16:14:26] 2025-11-24 21:14:24,950 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:14:26] 2025-11-24 21:14:24,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:14:26] 2025-11-24 21:14:24,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:14:26] 2025-11-24 21:14:24,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:14:26] 2025-11-24 21:14:24,951 | INFO     | [monitor] control thread has ended
[2025-11-24 16:14:26] 2025-11-24 21:14:25,519 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:14:26] 2025-11-24 21:14:25,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:14:26] 2025-11-24 21:14:25,533 [wrapper] pilotpid: 114873
[2025-11-24 16:14:26] 2025-11-24 21:14:25,536 [wrapper] Pilot exit status: 0
[2025-11-24 16:14:26] 2025-11-24 21:14:25,548 [wrapper] pandaids: 6895346501
[2025-11-24 16:14:26] 2025-11-24 21:14:25,741 [wrapper] cleanup supervisor_pilot 3220066 114874
[2025-11-24 16:14:26] 2025-11-24 21:14:25,762 [wrapper] Test setup, not cleaning
[2025-11-24 16:14:26] 2025-11-24 21:14:25,779 [wrapper] apfmon messages muted
[2025-11-24 16:14:26] 2025-11-24 21:14:25,804 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:14:26] 2025-11-24 21:14:25,830 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:14:26]  *** Error codes and diagnostics ***
[2025-11-24 16:14:26]     "exeErrorCode": 0,
[2025-11-24 16:14:26]     "exeErrorDiag": "",
[2025-11-24 16:14:26]     "pilotErrorCode": 0,
[2025-11-24 16:14:26]     "pilotErrorDiag": "",
[2025-11-24 16:14:26]  *** Listing of results directory ***
[2025-11-24 16:14:26] total 1335036
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-24 16:14:26] -rwx------. 1 boincer umatlas     36292 Nov 22 13:12 runpilot2-wrapper.sh
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 13:12 queuedata.json
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:14:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-24 16:14:26] -rw-r--r--. 2 boincer umatlas 410886230 Nov 24 00:02 EVNT.47483658._000459.pool.root.1
[2025-11-24 16:14:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-24 16:14:26] -rw-r--r--. 2 boincer umatlas    590094 Nov 24 00:02 input.tar.gz
[2025-11-24 16:14:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:02 pandaJob.out
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas        57 Nov 24 00:02 setup.sh.local
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas    989786 Nov 24 00:03 agis_schedconf.cvmfs.json
[2025-11-24 16:14:26] drwx------. 5 boincer umatlas      4096 Nov 24 00:03 pilot3
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas       533 Nov 24 16:03 boinc_task_state.xml
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas      6661 Nov 24 16:12 init_data.xml
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas 932040607 Nov 24 16:12 HITS.47556137._004544.pool.root.1
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas      1067 Nov 24 16:13 memory_monitor_summary.json
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas        95 Nov 24 16:13 pilot_heartbeat.json
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas   1516227 Nov 24 16:13 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas   2265692 Nov 24 16:13 log.47556137._004544.job.log.tgz.1
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas      8626 Nov 24 16:13 heartbeat.json
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas        29 Nov 24 16:14 wrapper_checkpoint.txt
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 16:14 boinc_mmap_file
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas       822 Nov 24 16:14 pilotlog.txt
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas   7849078 Nov 24 16:14 log.47556137._004544.job.log.1
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas       353 Nov 24 16:14 output.list
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas       620 Nov 24 16:14 runtime_log
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas  10137600 Nov 24 16:14 result.tar.gz
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas       660 Nov 24 16:14 ZF7LDmLH7g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcKKKDmPQlBQm.diag
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas      9333 Nov 24 16:14 runtime_log.err
[2025-11-24 16:14:26] -rw-r--r--. 1 boincer umatlas     21459 Nov 24 16:14 stderr.txt
[2025-11-24 16:14:26] HITS file was successfully produced:
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas 932040607 Nov 24 16:12 shared/HITS.pool.root.1
[2025-11-24 16:14:26]  *** Contents of shared directory: ***
[2025-11-24 16:14:26] total 1321960
[2025-11-24 16:14:26] -rw-r--r--. 2 boincer umatlas 410886230 Nov 24 00:02 ATLAS.root_0
[2025-11-24 16:14:26] -rw-r--r--. 2 boincer umatlas    590094 Nov 24 00:02 input.tar.gz
[2025-11-24 16:14:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas 932040607 Nov 24 16:12 HITS.pool.root.1
[2025-11-24 16:14:26] -rw-------. 1 boincer umatlas  10137600 Nov 24 16:14 result.tar.gz
16:14:27 (108863): run_atlas exited; CPU time 299392.770653
16:14:27 (108863): called boinc_finish(0)

</stderr_txt>
]]>

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