Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:17 (1328872): wrapper (7.7.26015): starting
00:05:17 (1328872): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:05:17] Arguments: --nthreads 8
[2025-11-23 00:05:17] Threads: 8
[2025-11-23 00:05:17] Checking for CVMFS
[2025-11-23 00:05:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:05:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:05:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:05:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:05:19] 2.13.2.0 2325231 25867 161608 153197 2 310 33445384 40960001 36226 16776704 0 181817016 99.737 131804948 49914 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:05:19] CVMFS is ok
[2025-11-23 00:05:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:05:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:05:19] Further information can be found at the LHC@home message board.
[2025-11-23 00:05:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:05:19] Checking for apptainer binary...
[2025-11-23 00:05:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:05:19] Running /usr/bin/apptainer --version
[2025-11-23 00:05:19] apptainer version 1.4.4-1.el9
[2025-11-23 00:05:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:05:20] c-208-37.aglt2.org
[2025-11-23 00:05:20] apptainer works
[2025-11-23 00:05:20] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:05:20] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:05:20] Starting ATLAS job with PandaID=6886199933
[2025-11-23 00:05:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:07:31]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:07:31] 2025-11-23 14:06:29,797 | INFO     | .. there are 39 such processes running
[2025-11-23 09:07:31] 2025-11-23 14:06:29,807 | INFO     | monitor loop #1887: job 0:6886199933 is in state 'finished'
[2025-11-23 09:07:31] 2025-11-23 14:06:29,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:07:31] 2025-11-23 14:06:30,797 | INFO     | time since job start (32405s) is within the limit (172800.0s)
[2025-11-23 09:07:31] 2025-11-23 14:06:32,315 | INFO     | monitor loop #1888: job 0:6886199933 is in state 'finished'
[2025-11-23 09:07:31] 2025-11-23 14:06:32,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:07:31] 2025-11-23 14:06:32,805 | INFO     | time since job start (32407s) is within the limit (172800.0s)
[2025-11-23 09:07:31] 2025-11-23 14:06:34,822 | INFO     | monitor loop #1889: job 0:6886199933 is in state 'finished'
[2025-11-23 09:07:31] 2025-11-23 14:06:34,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:07:31] 2025-11-23 14:06:34,830 | INFO     | time since job start (32409s) is within the limit (172800.0s)
[2025-11-23 09:07:31] 2025-11-23 14:06:36,837 | INFO     | time since job start (32411s) is within the limit (172800.0s)
[2025-11-23 09:07:31] 2025-11-23 14:06:37,333 | INFO     | monitor loop #1890: job 0:6886199933 is in state 'finished'
[2025-11-23 09:07:31] 2025-11-23 14:06:37,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:07:31] 2025-11-23 14:06:38,872 | INFO     | time since job start (32413s) is within the limit (172800.0s)
[2025-11-23 09:07:31] 2025-11-23 14:06:39,844 | INFO     | monitor loop #1891: job 0:6886199933 is in state 'finished'
[2025-11-23 09:07:31] 2025-11-23 14:06:39,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:07:31] 2025-11-23 14:06:40,879 | INFO     | time since job start (32415s) is within the limit (172800.0s)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,628 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 09:07:31] 2025-11-23 14:06:41,636 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3769.718382812499
[2025-11-23 09:07:31] 2025-11-23 14:06:41,661 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6886199933/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,662 | INFO     | extracted standard info from prmon json
[2025-11-23 09:07:31] 2025-11-23 14:06:41,662 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 09:07:31] 2025-11-23 14:06:41,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:07:31] 2025-11-23 14:06:41,673 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:07:31] 2025-11-23 14:06:41,673 | INFO     | sum of square deviations: 45901357976.000114
[2025-11-23 09:07:31] 2025-11-23 14:06:41,681 | INFO     | sum of deviations: -220085834738.82605
[2025-11-23 09:07:31] 2025-11-23 14:06:41,681 | INFO     | mean x: 1763890641.6956522
[2025-11-23 09:07:31] 2025-11-23 14:06:41,681 | INFO     | mean y: 3159141.4669187143
[2025-11-23 09:07:31] 2025-11-23 14:06:41,681 | INFO     | intersect: 8460585269.656164
[2025-11-23 09:07:31] 2025-11-23 14:06:41,681 | INFO     | chi2: 28.634740505734037
[2025-11-23 09:07:31] 2025-11-23 14:06:41,682 | INFO     | sum of square deviations: 44612286441.48649
[2025-11-23 09:07:31] 2025-11-23 14:06:41,689 | INFO     | sum of deviations: -28023935103.426773
[2025-11-23 09:07:31] 2025-11-23 14:06:41,689 | INFO     | mean x: 1763890489.211832
[2025-11-23 09:07:31] 2025-11-23 14:06:41,689 | INFO     | mean y: 3181851.7786259544
[2025-11-23 09:07:31] 2025-11-23 14:06:41,690 | INFO     | intersect: 1111198421.6995158
[2025-11-23 09:07:31] 2025-11-23 14:06:41,690 | INFO     | chi2: 24.999611000719
[2025-11-23 09:07:31] 2025-11-23 14:06:41,690 | INFO     | current chi2=24.999611000719 (change=12.694822585478333 %)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,690 | INFO     | right removable region: 523
[2025-11-23 09:07:31] 2025-11-23 14:06:41,690 | INFO     | sum of square deviations: 44611739271.48649
[2025-11-23 09:07:31] 2025-11-23 14:06:41,698 | INFO     | sum of deviations: -451436229454.4447
[2025-11-23 09:07:31] 2025-11-23 14:06:41,698 | INFO     | mean x: 1763890794.211832
[2025-11-23 09:07:31] 2025-11-23 14:06:41,698 | INFO     | mean y: 3186496.2652671756
[2025-11-23 09:07:31] 2025-11-23 14:06:41,698 | INFO     | intersect: 17852394402.340763
[2025-11-23 09:07:31] 2025-11-23 14:06:41,699 | INFO     | chi2: 24.64262289565549
[2025-11-23 09:07:31] 2025-11-23 14:06:41,699 | INFO     | current chi2=24.64262289565549 (change=13.941518377926757 %)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,699 | INFO     | left removable region: 10
[2025-11-23 09:07:31] 2025-11-23 14:06:41,699 | INFO     | sum of square deviations: 41860698652.56145
[2025-11-23 09:07:31] 2025-11-23 14:06:41,710 | INFO     | sum of deviations: -407921445182.0642
[2025-11-23 09:07:31] 2025-11-23 14:06:41,710 | INFO     | mean x: 1763890763.748538
[2025-11-23 09:07:31] 2025-11-23 14:06:41,710 | INFO     | mean y: 3236992.247563353
[2025-11-23 09:07:31] 2025-11-23 14:06:41,710 | INFO     | intersect: 17191886313.74117
[2025-11-23 09:07:31] 2025-11-23 14:06:41,711 | INFO     | chi2: 17.78145183728994
[2025-11-23 09:07:31] 2025-11-23 14:06:41,711 | INFO     | current memory leak: -9.74 B/s (using 513 data points, chi2=17.78)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,711 | INFO     | could have reported an average CPU frequency of 3769 MHz (21 samples)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,711 | INFO     | ..............................
[2025-11-23 09:07:31] 2025-11-23 14:06:41,711 | INFO     | . Timing measurements:
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . get job = 0 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . initial setup = 3 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . payload setup = 60 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . stage-in = 0 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . payload execution = 32253 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . stage-out = 5 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | . log creation = 1 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,712 | INFO     | ..............................
[2025-11-23 09:07:31] 2025-11-23 14:06:41,827 | INFO     | 
[2025-11-23 09:07:31] 2025-11-23 14:06:41,831 | INFO     | job summary report
[2025-11-23 09:07:31] 2025-11-23 14:06:41,831 | INFO     | --------------------------------------------------
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | PanDA job id: 6886199933
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | task id: 47450870
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | errors: (none)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | pilot state: finished 
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | transexitcode: 0
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | exeerrorcode: 0
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | exeerrordiag: 
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | exitcode: 0
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | exitmsg: OK
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | cpuconsumptiontime: 87981 s
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | nevents: 1000
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | neventsw: 0
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | pid: 1435259
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | pgrp: 1435259
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | corecount: 8
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | event service: False
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | sizes: {0: 2299000, 11: 2299000, 22: 2299028, 23: 2299318, 33: 2299346, 32318: 2356995, 32326: 2365991, 32328: 2366047, 32357: 2366293}
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | --------------------------------------------------
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | 
[2025-11-23 09:07:31] 2025-11-23 14:06:41,832 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | job 6886199933 has completed (purged errors)
[2025-11-23 09:07:31] 2025-11-23 14:06:41,896 | INFO     | overall cleanup function is called
[2025-11-23 09:07:31] 2025-11-23 14:06:42,919 | INFO     | --- collectZombieJob: --- 10, [1435259]
[2025-11-23 09:07:31] 2025-11-23 14:06:42,920 | INFO     | zombie collector waiting for pid 1435259
[2025-11-23 09:07:31] 2025-11-23 14:06:42,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:07:31] 2025-11-23 14:06:42,920 | INFO     | collected zombie processes
[2025-11-23 09:07:31] 2025-11-23 14:06:42,920 | INFO     | will attempt to kill all subprocesses of pid=1435259
[2025-11-23 09:07:31] 2025-11-23 14:06:44,101 | INFO     | process IDs to be killed: [1435259] (in reverse order)
[2025-11-23 09:07:31] 2025-11-23 14:06:44,461 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:07:31] 2025-11-23 14:06:44,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:07:31] 2025-11-23 14:06:44,494 | INFO     | did not find any defunct processes belonging to 1435259
[2025-11-23 09:07:31] 2025-11-23 14:06:44,518 | INFO     | did not find any defunct processes belonging to 1435259
[2025-11-23 09:07:31] 2025-11-23 14:06:44,519 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:07:31] 2025-11-23 14:06:44,519 | INFO     | ready for new job
[2025-11-23 09:07:31] 2025-11-23 14:06:44,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:07:31] 2025-11-23 14:06:44,521 | INFO     | ***************************************
[2025-11-23 09:07:31] 2025-11-23 14:06:44,521 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:07:31] 2025-11-23 14:06:44,521 | INFO     | ***************************************
[2025-11-23 09:07:31] 2025-11-23 14:06:44,521 | INFO     | 
[2025-11-23 09:07:31] 2025-11-23 14:06:44,525 | INFO     | architecture information:
[2025-11-23 09:07:31] 2025-11-23 14:06:44,530 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:07:31] 2025-11-23 14:06:44,565 | INFO     | cat /etc/os-release:
[2025-11-23 09:07:31] NAME="CentOS Linux"
[2025-11-23 09:07:31] VERSION="7 (Core)"
[2025-11-23 09:07:31] ID="centos"
[2025-11-23 09:07:31] ID_LIKE="rhel fedora"
[2025-11-23 09:07:31] VERSION_ID="7"
[2025-11-23 09:07:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:07:31] ANSI_COLOR="0;31"
[2025-11-23 09:07:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:07:31] HOME_URL="https://www.centos.org/"
[2025-11-23 09:07:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:07:31] 
[2025-11-23 09:07:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:07:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:07:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:07:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:07:31] 
[2025-11-23 09:07:31] 2025-11-23 14:06:44,565 | INFO     | ***************************************
[2025-11-23 09:07:31] 2025-11-23 14:06:45,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-11-23 09:07:31] 2025-11-23 14:06:45,114 | INFO     | sufficient remaining disk space (160329367552 B)
[2025-11-23 09:07:31] 2025-11-23 14:06:45,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:07:31] 2025-11-23 14:06:45,114 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:07:31] 2025-11-23 14:06:45,114 | INFO     | update_server=False
[2025-11-23 09:07:31] 2025-11-23 14:06:45,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:07:31] 2025-11-23 14:06:45,499 | INFO     | all payload control threads have been joined
[2025-11-23 09:07:31] 2025-11-23 14:06:45,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:07:31] 2025-11-23 14:06:45,872 | INFO     | aborting loop
[2025-11-23 09:07:31] 2025-11-23 14:06:46,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:07:31] 2025-11-23 14:06:46,111 | INFO     | all data control threads have been joined
[2025-11-23 09:07:31] 2025-11-23 14:06:46,130 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,215 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,295 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:07:31] 2025-11-23 14:06:46,336 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,504 | INFO     | [payload] control thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,724 | INFO     | all job control threads have been joined
[2025-11-23 09:07:31] 2025-11-23 14:06:46,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:07:31] 2025-11-23 14:06:46,877 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:46,896 | INFO     | [job] validate thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:47,118 | INFO     | [data] control thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:47,480 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:47,533 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:47,569 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:47,730 | INFO     | [job] control thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:47,875 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:48,341 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:06:50,082 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:07:31] 2025-11-23 14:07:15,223 | INFO     | PID=1354893 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 09:07:31] 2025-11-23 14:07:15,223 | INFO     | .. there are 39 such processes running
[2025-11-23 09:07:31] 2025-11-23 14:07:15,223 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:07:31] 2025-11-23 14:07:15,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:07:31] 2025-11-23 14:07:15,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:07:31] 2025-11-23 14:07:24,105 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:07:31] 2025-11-23 14:07:25,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612877113152)>', '<ExcThread(monitor, started 140612229641984)>']
[2025-11-23 09:07:31] 2025-11-23 14:07:25,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:07:31] 2025-11-23 14:07:25,282 | INFO     | [monitor] control thread has ended
[2025-11-23 09:07:31] 2025-11-23 14:07:30,144 | INFO     | all workflow threads have been joined
[2025-11-23 09:07:31] 2025-11-23 14:07:30,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:07:31] 2025-11-23 14:07:30,146 | INFO     | traces error code: 0
[2025-11-23 09:07:31] 2025-11-23 14:07:30,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:07:31] 2025-11-23 14:07:30,343 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:07:31] 2025-11-23 14:07:30,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:07:31] 2025-11-23 14:07:30,407 [wrapper] pilotpid: 1354893
[2025-11-23 09:07:31] 2025-11-23 14:07:30,432 [wrapper] Pilot exit status: 0
[2025-11-23 09:07:31] 2025-11-23 14:07:30,530 [wrapper] pandaids: 6886199933
[2025-11-23 09:07:31] 2025-11-23 14:07:30,878 [wrapper] cleanup supervisor_pilot 4061194 1354894
[2025-11-23 09:07:31] 2025-11-23 14:07:30,896 [wrapper] Test setup, not cleaning
[2025-11-23 09:07:31] 2025-11-23 14:07:30,919 [wrapper] apfmon messages muted
[2025-11-23 09:07:31] 2025-11-23 14:07:30,941 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:07:31] 2025-11-23 14:07:30,985 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:07:31]  *** Error codes and diagnostics ***
[2025-11-23 09:07:31]     "exeErrorCode": 0,
[2025-11-23 09:07:31]     "exeErrorDiag": "",
[2025-11-23 09:07:31]     "pilotErrorCode": 0,
[2025-11-23 09:07:31]     "pilotErrorDiag": "",
[2025-11-23 09:07:31]  *** Listing of results directory ***
[2025-11-23 09:07:31] total 926660
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 14 09:24 pilot3.tar.gz
[2025-11-23 09:07:31] -rwx------. 1 boincer umatlas     36292 Nov 14 09:57 runpilot2-wrapper.sh
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 14 09:57 queuedata.json
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:07:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:05 run_atlas
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:05 job.xml
[2025-11-23 09:07:31] -rw-r--r--. 2 boincer umatlas 379384414 Nov 23 00:05 EVNT.14545720._000206.pool.root.1
[2025-11-23 09:07:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 23 00:05 start_atlas.sh
[2025-11-23 09:07:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:05 shared
[2025-11-23 09:07:31] -rw-r--r--. 2 boincer umatlas    590122 Nov 23 00:05 input.tar.gz
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:05 boinc_lockfile
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas      2927 Nov 23 00:05 pandaJob.out
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas    989784 Nov 23 00:06 agis_schedconf.cvmfs.json
[2025-11-23 09:07:31] drwx------. 5 boincer umatlas      4096 Nov 23 00:06 pilot3
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas       531 Nov 23 08:36 boinc_task_state.xml
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas      7174 Nov 23 09:01 init_data.xml
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas 553813319 Nov 23 09:05 HITS.47450870._001871.pool.root.1
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas      1072 Nov 23 09:05 memory_monitor_summary.json
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas   1526164 Nov 23 09:06 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas   1843854 Nov 23 09:06 log.47450870._001871.job.log.tgz.1
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas     27131 Nov 23 09:06 heartbeat.json
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas        95 Nov 23 09:07 pilot_heartbeat.json
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas        27 Nov 23 09:07 wrapper_checkpoint.txt
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas      4826 Nov 23 09:07 pilotlog.txt
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas   4024697 Nov 23 09:07 log.47450870._001871.job.log.1
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas       353 Nov 23 09:07 output.list
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas       620 Nov 23 09:07 runtime_log
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas   5908480 Nov 23 09:07 result.tar.gz
[2025-11-23 09:07:31] -rw-------. 1 boincer umatlas       665 Nov 23 09:07 sMuKDmlPAe8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0sqMDmtdnFKm.diag
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas      8718 Nov 23 09:07 runtime_log.err
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 09:07 boinc_mmap_file
[2025-11-23 09:07:31] -rw-r--r--. 1 boincer umatlas     21767 Nov 23 09:07 stderr.txt
[2025-11-23 09:07:32] HITS file was successfully produced:
[2025-11-23 09:07:32] -rw-------. 1 boincer umatlas 553813319 Nov 23 09:05 shared/HITS.pool.root.1
[2025-11-23 09:07:32]  *** Contents of shared directory: ***
[2025-11-23 09:07:32] total 917708
[2025-11-23 09:07:32] -rw-r--r--. 2 boincer umatlas 379384414 Nov 23 00:05 ATLAS.root_0
[2025-11-23 09:07:32] -rw-r--r--. 2 boincer umatlas     15120 Nov 23 00:05 start_atlas.sh
[2025-11-23 09:07:32] -rw-r--r--. 2 boincer umatlas    590122 Nov 23 00:05 input.tar.gz
[2025-11-23 09:07:32] -rw-------. 1 boincer umatlas 553813319 Nov 23 09:05 HITS.pool.root.1
[2025-11-23 09:07:32] -rw-------. 1 boincer umatlas   5908480 Nov 23 09:07 result.tar.gz
09:07:34 (1328872): run_atlas exited; CPU time 88636.763906
09:07:34 (1328872): called boinc_finish(0)

</stderr_txt>
]]>

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