Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:18 (3522463): wrapper (7.7.26015): starting
00:03:18 (3522463): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:03:18] Arguments: --nthreads 8
[2025-11-23 00:03:18] Threads: 8
[2025-11-23 00:03:18] Checking for CVMFS
[2025-11-23 00:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:03:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:03:19] 2.13.2.0 6956 29001 446180 153197 3 643 21387087 40960000 17377 16776704 0 109262906 99.653 88260684 37132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:03:19] CVMFS is ok
[2025-11-23 00:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:03:19] Further information can be found at the LHC@home message board.
[2025-11-23 00:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:03:19] Checking for apptainer binary...
[2025-11-23 00:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:03:19] Running /usr/bin/apptainer --version
[2025-11-23 00:03:19] apptainer version 1.4.4-1.el9
[2025-11-23 00:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:03:19] c-206-34.aglt2.org
[2025-11-23 00:03:19] apptainer works
[2025-11-23 00:03:19] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:03:19] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:03:19] Starting ATLAS job with PandaID=6895346493
[2025-11-23 00:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:19:34]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:19:34] 2025-11-24 05:18:42,708 | INFO     | sum of square deviations: 906712028963.3995
[2025-11-24 00:19:34] 2025-11-24 05:18:42,797 | INFO     | sum of deviations: 4928957447331.196
[2025-11-24 00:19:34] 2025-11-24 05:18:42,798 | INFO     | mean x: 1763917880.4006994
[2025-11-24 00:19:34] 2025-11-24 05:18:42,798 | INFO     | mean y: 2914257.997902098
[2025-11-24 00:19:34] 2025-11-24 05:18:42,798 | INFO     | intersect: -9585881186.815414
[2025-11-24 00:19:34] 2025-11-24 05:18:42,799 | INFO     | chi2: 8.936182740601964
[2025-11-24 00:19:34] 2025-11-24 05:18:42,800 | INFO     | sum of square deviations: 897235084938.502
[2025-11-24 00:19:34] 2025-11-24 05:18:42,843 | INFO     | sum of deviations: 5462482459727.57
[2025-11-24 00:19:34] 2025-11-24 05:18:42,843 | INFO     | mean x: 1763917727.9101753
[2025-11-24 00:19:34] 2025-11-24 05:18:42,843 | INFO     | mean y: 2922843.340350877
[2025-11-24 00:19:34] 2025-11-24 05:18:42,843 | INFO     | intersect: -10736034884.524544
[2025-11-24 00:19:34] 2025-11-24 05:18:42,844 | INFO     | chi2: 5.1593842749299
[2025-11-24 00:19:34] 2025-11-24 05:18:42,845 | INFO     | current chi2=5.1593842749299 (change=42.264114055233044 %)
[2025-11-24 00:19:34] 2025-11-24 05:18:42,846 | INFO     | sum of square deviations: 887824420981.8477
[2025-11-24 00:19:34] 2025-11-24 05:18:42,900 | INFO     | sum of deviations: 5819827368415.836
[2025-11-24 00:19:34] 2025-11-24 05:18:42,900 | INFO     | mean x: 1763917575.4197183
[2025-11-24 00:19:34] 2025-11-24 05:18:42,900 | INFO     | mean y: 2928628.998591549
[2025-11-24 00:19:34] 2025-11-24 05:18:42,900 | INFO     | intersect: -11559825828.35742
[2025-11-24 00:19:34] 2025-11-24 05:18:42,901 | INFO     | chi2: 3.069692986054543
[2025-11-24 00:19:34] 2025-11-24 05:18:42,902 | INFO     | current chi2=3.069692986054543 (change=40.502726246413374 %)
[2025-11-24 00:19:34] 2025-11-24 05:18:42,903 | INFO     | sum of square deviations: 878479545295.5039
[2025-11-24 00:19:34] 2025-11-24 05:18:42,939 | INFO     | sum of deviations: 5883420007528.646
[2025-11-24 00:19:34] 2025-11-24 05:18:42,939 | INFO     | mean x: 1763917422.9272084
[2025-11-24 00:19:34] 2025-11-24 05:18:42,939 | INFO     | mean y: 2929664.821908127
[2025-11-24 00:19:34] 2025-11-24 05:18:42,939 | INFO     | intersect: -11810512222.646729
[2025-11-24 00:19:34] 2025-11-24 05:18:42,940 | INFO     | chi2: 2.8675690993518215
[2025-11-24 00:19:34] 2025-11-24 05:18:42,941 | INFO     | current chi2=2.8675690993518215 (change=6.5844984374971745 %)
[2025-11-24 00:19:34] 2025-11-24 05:18:42,941 | INFO     | right removable region: 1414
[2025-11-24 00:19:34] 2025-11-24 05:18:42,942 | INFO     | sum of square deviations: 897232641883.6864
[2025-11-24 00:19:34] 2025-11-24 05:18:42,986 | INFO     | sum of deviations: 4487640875229.373
[2025-11-24 00:19:34] 2025-11-24 05:18:42,987 | INFO     | mean x: 1763918032.9108772
[2025-11-24 00:19:34] 2025-11-24 05:18:42,987 | INFO     | mean y: 2921354.9950877195
[2025-11-24 00:19:34] 2025-11-24 05:18:42,987 | INFO     | intersect: -8819573832.458445
[2025-11-24 00:19:34] 2025-11-24 05:18:42,988 | INFO     | chi2: 6.572670367915477
[2025-11-24 00:19:34] 2025-11-24 05:18:42,988 | INFO     | current chi2=6.572670367915477 (change=26.44879185323458 %)
[2025-11-24 00:19:34] 2025-11-24 05:18:42,989 | INFO     | sum of square deviations: 887820056815.1941
[2025-11-24 00:19:34] 2025-11-24 05:18:43,028 | INFO     | sum of deviations: 4347119308798.396
[2025-11-24 00:19:34] 2025-11-24 05:18:43,028 | INFO     | mean x: 1763918185.4169014
[2025-11-24 00:19:34] 2025-11-24 05:18:43,028 | INFO     | mean y: 2923631.592253521
[2025-11-24 00:19:34] 2025-11-24 05:18:43,029 | INFO     | intersect: -8633919773.898169
[2025-11-24 00:19:34] 2025-11-24 05:18:43,030 | INFO     | chi2: 6.458434133488373
[2025-11-24 00:19:34] 2025-11-24 05:18:43,030 | INFO     | current chi2=6.458434133488373 (change=1.7380490429696451 %)
[2025-11-24 00:19:34] 2025-11-24 05:18:43,030 | INFO     | left removable region: 20
[2025-11-24 00:19:34] 2025-11-24 05:18:43,031 | INFO     | sum of square deviations: 839939694290.1688
[2025-11-24 00:19:34] 2025-11-24 05:18:43,068 | INFO     | sum of deviations: 5049632886429.154
[2025-11-24 00:19:34] 2025-11-24 05:18:43,068 | INFO     | mean x: 1763918002.4591105
[2025-11-24 00:19:34] 2025-11-24 05:18:43,068 | INFO     | mean y: 2943164.5903873746
[2025-11-24 00:19:34] 2025-11-24 05:18:43,069 | INFO     | intersect: -10601554294.84847
[2025-11-24 00:19:34] 2025-11-24 05:18:43,070 | INFO     | chi2: 0.22938810228489506
[2025-11-24 00:19:34] 2025-11-24 05:18:43,070 | INFO     | current memory leak: 6.01 B/s (using 1394 data points, chi2=0.23)
[2025-11-24 00:19:34] 2025-11-24 05:18:43,071 | INFO     | could have reported an average CPU frequency of 3278 MHz (51 samples)
[2025-11-24 00:19:34] 2025-11-24 05:18:43,071 | INFO     | ..............................
[2025-11-24 00:19:34] 2025-11-24 05:18:43,071 | INFO     | . Timing measurements:
[2025-11-24 00:19:34] 2025-11-24 05:18:43,071 | INFO     | . get job = 0 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,071 | INFO     | . initial setup = 2 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,072 | INFO     | . payload setup = 17 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,072 | INFO     | . stage-in = 0 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,072 | INFO     | . payload execution = 87201 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,072 | INFO     | . stage-out = 9 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,072 | INFO     | . log creation = 1 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,072 | INFO     | ..............................
[2025-11-24 00:19:34] 2025-11-24 05:18:43,626 | INFO     | 
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | job summary report
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | --------------------------------------------------
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | PanDA job id: 6895346493
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | task id: 47556137
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | errors: (none)
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | pilot state: finished 
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | transexitcode: 0
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | exeerrorcode: 0
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | exeerrordiag: 
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | exitcode: 0
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | exitmsg: OK
[2025-11-24 00:19:34] 2025-11-24 05:18:43,627 | INFO     | cpuconsumptiontime: 198860 s
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | nevents: 1000
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | neventsw: 0
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | pid: 3569350
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | pgrp: 3569350
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | corecount: 8
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | event service: False
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | sizes: {0: 2298584, 1: 2298783, 11: 2299073, 22: 2299073, 87224: 2364144, 87235: 2373350, 87260: 2373540}
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | --------------------------------------------------
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | 
[2025-11-24 00:19:34] 2025-11-24 05:18:43,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | job 6895346493 has completed (purged errors)
[2025-11-24 00:19:34] 2025-11-24 05:18:43,991 | INFO     | overall cleanup function is called
[2025-11-24 00:19:34] 2025-11-24 05:18:45,044 | INFO     | --- collectZombieJob: --- 10, [3569350]
[2025-11-24 00:19:34] 2025-11-24 05:18:45,045 | INFO     | zombie collector waiting for pid 3569350
[2025-11-24 00:19:34] 2025-11-24 05:18:45,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:19:34] 2025-11-24 05:18:45,045 | INFO     | collected zombie processes
[2025-11-24 00:19:34] 2025-11-24 05:18:45,045 | INFO     | will attempt to kill all subprocesses of pid=3569350
[2025-11-24 00:19:34] 2025-11-24 05:18:46,503 | INFO     | process IDs to be killed: [3569350] (in reverse order)
[2025-11-24 00:19:34] 2025-11-24 05:18:46,866 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:19:34] 2025-11-24 05:18:46,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:19:34] 2025-11-24 05:18:46,879 | INFO     | did not find any defunct processes belonging to 3569350
[2025-11-24 00:19:34] 2025-11-24 05:18:46,891 | INFO     | did not find any defunct processes belonging to 3569350
[2025-11-24 00:19:34] 2025-11-24 05:18:46,901 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:19:34] 2025-11-24 05:18:46,901 | INFO     | ready for new job
[2025-11-24 00:19:34] 2025-11-24 05:18:46,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:19:34] 2025-11-24 05:18:46,965 | INFO     | ***************************************
[2025-11-24 00:19:34] 2025-11-24 05:18:46,965 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:19:34] 2025-11-24 05:18:46,965 | INFO     | ***************************************
[2025-11-24 00:19:34] 2025-11-24 05:18:46,965 | INFO     | 
[2025-11-24 00:19:34] 2025-11-24 05:18:47,006 | INFO     | architecture information:
[2025-11-24 00:19:34] 2025-11-24 05:18:47,092 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:19:34] 2025-11-24 05:18:47,355 | INFO     | cat /etc/os-release:
[2025-11-24 00:19:34] NAME="CentOS Linux"
[2025-11-24 00:19:34] VERSION="7 (Core)"
[2025-11-24 00:19:34] ID="centos"
[2025-11-24 00:19:34] ID_LIKE="rhel fedora"
[2025-11-24 00:19:34] VERSION_ID="7"
[2025-11-24 00:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:19:34] ANSI_COLOR="0;31"
[2025-11-24 00:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:19:34] HOME_URL="https://www.centos.org/"
[2025-11-24 00:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:19:34] 
[2025-11-24 00:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:19:34] 
[2025-11-24 00:19:34] 2025-11-24 05:18:47,356 | INFO     | ***************************************
[2025-11-24 00:19:34] 2025-11-24 05:18:47,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-24 00:19:34] 2025-11-24 05:18:48,119 | INFO     | sufficient remaining disk space (81144053760 B)
[2025-11-24 00:19:34] 2025-11-24 05:18:48,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:19:34] 2025-11-24 05:18:48,119 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:19:34] 2025-11-24 05:18:48,120 | INFO     | update_server=False
[2025-11-24 00:19:34] 2025-11-24 05:18:48,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:19:34] 2025-11-24 05:18:48,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:19:34] 2025-11-24 05:18:48,466 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 00:19:34] 2025-11-24 05:18:48,469 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 00:19:34] 2025-11-24 05:18:48,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:19:34] 2025-11-24 05:18:48,470 | INFO     | will abort loop
[2025-11-24 00:19:34] 2025-11-24 05:18:48,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:19:34] 2025-11-24 05:18:48,630 | INFO     | all data control threads have been joined
[2025-11-24 00:19:34] 2025-11-24 05:18:49,106 | INFO     | all payload control threads have been joined
[2025-11-24 00:19:34] 2025-11-24 05:18:49,126 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,212 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,415 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,431 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,477 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,520 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,597 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,638 | INFO     | [data] control thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,702 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:49,780 | INFO     | all job control threads have been joined
[2025-11-24 00:19:34] 2025-11-24 05:18:49,888 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:50,009 | INFO     | [job] validate thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:50,114 | INFO     | [payload] control thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:50,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:50,542 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:50,791 | INFO     | [job] control thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:51,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:19:34] 2025-11-24 05:18:55,624 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:19:34] 2025-11-24 05:18:57,639 [wrapper] supervise_pilot (15 min periods counter: 98)
[2025-11-24 00:19:34] 2025-11-24 05:19:16,003 | INFO     | PID=3534743 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:19:34] 2025-11-24 05:19:16,003 | INFO     | .. there are 19 such processes running
[2025-11-24 00:19:34] 2025-11-24 05:19:16,004 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:19:34] 2025-11-24 05:19:16,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:19:34] 2025-11-24 05:19:16,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:19:34] 2025-11-24 05:19:26,763 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:19:34] 2025-11-24 05:19:27,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503166326592)>', '<ExcThread(monitor, started 140502540220160)>']
[2025-11-24 00:19:34] 2025-11-24 05:19:28,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:19:34] 2025-11-24 05:19:28,091 | INFO     | [monitor] control thread has ended
[2025-11-24 00:19:34] 2025-11-24 05:19:32,962 | INFO     | all workflow threads have been joined
[2025-11-24 00:19:34] 2025-11-24 05:19:32,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:19:34] 2025-11-24 05:19:32,963 | INFO     | traces error code: 0
[2025-11-24 00:19:34] 2025-11-24 05:19:32,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:19:34] 2025-11-24 05:19:33,448 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:19:34] 2025-11-24 05:19:33,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:19:34] 2025-11-24 05:19:33,454 [wrapper] pilotpid: 3534743
[2025-11-24 00:19:34] 2025-11-24 05:19:33,456 [wrapper] Pilot exit status: 0
[2025-11-24 00:19:34] 2025-11-24 05:19:33,470 [wrapper] pandaids: 6895346493
[2025-11-24 00:19:34] 2025-11-24 05:19:34,023 [wrapper] cleanup supervisor_pilot 2843492 3534744
[2025-11-24 00:19:34] 2025-11-24 05:19:34,053 [wrapper] Test setup, not cleaning
[2025-11-24 00:19:34] 2025-11-24 05:19:34,086 [wrapper] apfmon messages muted
[2025-11-24 00:19:34] 2025-11-24 05:19:34,089 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:19:34] 2025-11-24 05:19:34,092 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:19:34]  *** Error codes and diagnostics ***
[2025-11-24 00:19:34]     "exeErrorCode": 0,
[2025-11-24 00:19:34]     "exeErrorDiag": "",
[2025-11-24 00:19:34]     "pilotErrorCode": 0,
[2025-11-24 00:19:34]     "pilotErrorDiag": "",
[2025-11-24 00:19:34]  *** Listing of results directory ***
[2025-11-24 00:19:34] total 1326924
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-24 00:19:34] -rwx------. 1 boincer umatlas     36292 Nov 22 13:05 runpilot2-wrapper.sh
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 13:05 queuedata.json
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:19:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:03 run_atlas
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:03 job.xml
[2025-11-24 00:19:34] -rw-r--r--. 2 boincer umatlas 409115988 Nov 23 00:03 EVNT.47483658._000458.pool.root.1
[2025-11-24 00:19:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:03 start_atlas.sh
[2025-11-24 00:19:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:03 shared
[2025-11-24 00:19:34] -rw-r--r--. 2 boincer umatlas    590096 Nov 23 00:03 input.tar.gz
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:03 boinc_lockfile
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:03 pandaJob.out
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas        57 Nov 23 00:03 setup.sh.local
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas    989784 Nov 23 00:03 agis_schedconf.cvmfs.json
[2025-11-24 00:19:34] drwx------. 5 boincer umatlas      4096 Nov 23 00:03 pilot3
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas       532 Nov 24 00:04 boinc_task_state.xml
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas      6901 Nov 24 00:11 init_data.xml
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas 918833877 Nov 24 00:17 HITS.47556137._004536.pool.root.1
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas      1051 Nov 24 00:18 memory_monitor_summary.json
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas   1526164 Nov 24 00:18 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas   2442336 Nov 24 00:18 log.47556137._004536.job.log.tgz.1
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas      8578 Nov 24 00:18 heartbeat.json
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas        95 Nov 24 00:19 pilot_heartbeat.json
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas        28 Nov 24 00:19 wrapper_checkpoint.txt
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 00:19 boinc_mmap_file
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas      5010 Nov 24 00:19 pilotlog.txt
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas  11004959 Nov 24 00:19 log.47556137._004536.job.log.1
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas       353 Nov 24 00:19 output.list
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas       620 Nov 24 00:19 runtime_log
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas  13465600 Nov 24 00:19 result.tar.gz
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas      9343 Nov 24 00:19 runtime_log.err
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas       661 Nov 24 00:19 gh5KDmmA7g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcDIKDmAuSUSn.diag
[2025-11-24 00:19:34] -rw-r--r--. 1 boincer umatlas     21146 Nov 24 00:19 stderr.txt
[2025-11-24 00:19:34] HITS file was successfully produced:
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas 918833877 Nov 24 00:17 shared/HITS.pool.root.1
[2025-11-24 00:19:34]  *** Contents of shared directory: ***
[2025-11-24 00:19:34] total 1310584
[2025-11-24 00:19:34] -rw-r--r--. 2 boincer umatlas 409115988 Nov 23 00:03 ATLAS.root_0
[2025-11-24 00:19:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:03 start_atlas.sh
[2025-11-24 00:19:34] -rw-r--r--. 2 boincer umatlas    590096 Nov 23 00:03 input.tar.gz
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas 918833877 Nov 24 00:17 HITS.pool.root.1
[2025-11-24 00:19:34] -rw-------. 1 boincer umatlas  13465600 Nov 24 00:19 result.tar.gz
00:19:35 (3522463): run_atlas exited; CPU time 198268.132738
00:19:35 (3522463): called boinc_finish(0)

</stderr_txt>
]]>

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