Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:42 (2002096): wrapper (7.7.26015): starting
00:14:42 (2002096): wrapper: running run_atlas (--nthreads 11)
[2025-11-23 00:14:42] Arguments: --nthreads 11
[2025-11-23 00:14:42] Threads: 11
[2025-11-23 00:14:42] Checking for CVMFS
[2025-11-23 00:14:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:14:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:14:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:14:45] 2.13.2.0 5986 30841 269292 153198 3 92 30828021 40960001 15049 16776704 0 60470788 99.796 49589571 34827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:14:45] CVMFS is ok
[2025-11-23 00:14:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:14:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:14:45] Further information can be found at the LHC@home message board.
[2025-11-23 00:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:14:45] Checking for apptainer binary...
[2025-11-23 00:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:14:45] Running /usr/bin/apptainer --version
[2025-11-23 00:14:45] apptainer version 1.4.4-1.el9
[2025-11-23 00:14:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:14:46] c-210-31-1.aglt2.org
[2025-11-23 00:14:46] apptainer works
[2025-11-23 00:14:46] Set ATHENA_PROC_NUMBER=11
[2025-11-23 00:14:46] Set ATHENA_CORE_NUMBER=11
[2025-11-23 00:14:46] Starting ATLAS job with PandaID=6895337275
[2025-11-23 00:14:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:18:19]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:18:19] 2025-11-23 21:17:11,325 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2655.876232142858
[2025-11-23 16:18:19] 2025-11-23 21:17:11,336 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895337275/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,336 | INFO     | extracted standard info from prmon json
[2025-11-23 16:18:19] 2025-11-23 21:17:11,337 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:18:19] 2025-11-23 21:17:11,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:18:19] 2025-11-23 21:17:11,352 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:18:19] 2025-11-23 21:17:11,354 | INFO     | sum of square deviations: 259192520880.2347
[2025-11-23 16:18:19] 2025-11-23 21:17:11,372 | INFO     | sum of deviations: 3559272657828.198
[2025-11-23 16:18:19] 2025-11-23 21:17:11,372 | INFO     | mean x: 1763903900.9288747
[2025-11-23 16:18:19] 2025-11-23 21:17:11,372 | INFO     | mean y: 3397381.032908705
[2025-11-23 16:18:19] 2025-11-23 21:17:11,372 | INFO     | intersect: -24218809742.426575
[2025-11-23 16:18:19] 2025-11-23 21:17:11,373 | INFO     | chi2: 15.78628889660933
[2025-11-23 16:18:19] 2025-11-23 21:17:11,375 | INFO     | sum of square deviations: 255088024343.6352
[2025-11-23 16:18:19] 2025-11-23 21:17:11,394 | INFO     | sum of deviations: 3954878109187.247
[2025-11-23 16:18:19] 2025-11-23 21:17:11,394 | INFO     | mean x: 1763903748.447172
[2025-11-23 16:18:19] 2025-11-23 21:17:11,394 | INFO     | mean y: 3412076.732123799
[2025-11-23 16:18:19] 2025-11-23 21:17:11,395 | INFO     | intersect: -27344105861.03464
[2025-11-23 16:18:19] 2025-11-23 21:17:11,396 | INFO     | chi2: 12.275195975663975
[2025-11-23 16:18:19] 2025-11-23 21:17:11,396 | INFO     | current chi2=12.275195975663975 (change=22.241407996147135 %)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,396 | INFO     | right removable region: 936
[2025-11-23 16:18:19] 2025-11-23 21:17:11,397 | INFO     | sum of square deviations: 255086054043.63495
[2025-11-23 16:18:19] 2025-11-23 21:17:11,414 | INFO     | sum of deviations: 3101842638050.8447
[2025-11-23 16:18:19] 2025-11-23 21:17:11,415 | INFO     | mean x: 1763904053.447172
[2025-11-23 16:18:19] 2025-11-23 21:17:11,415 | INFO     | mean y: 3414367.5827107793
[2025-11-23 16:18:19] 2025-11-23 21:17:11,415 | INFO     | intersect: -21445632789.95898
[2025-11-23 16:18:19] 2025-11-23 21:17:11,416 | INFO     | chi2: 11.324737011262108
[2025-11-23 16:18:19] 2025-11-23 21:17:11,416 | INFO     | current chi2=11.324737011262108 (change=28.262195849624284 %)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,417 | INFO     | sum of square deviations: 251023169418.90173
[2025-11-23 16:18:19] 2025-11-23 21:17:11,434 | INFO     | sum of deviations: 2697599196384.749
[2025-11-23 16:18:19] 2025-11-23 21:17:11,435 | INFO     | mean x: 1763904205.9656653
[2025-11-23 16:18:19] 2025-11-23 21:17:11,435 | INFO     | mean y: 3429543.55472103
[2025-11-23 16:18:19] 2025-11-23 21:17:11,435 | INFO     | intersect: -18952217377.515358
[2025-11-23 16:18:19] 2025-11-23 21:17:11,436 | INFO     | chi2: 8.022065994149166
[2025-11-23 16:18:19] 2025-11-23 21:17:11,436 | INFO     | current chi2=8.022065994149166 (change=29.16333521766144 %)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,437 | INFO     | sum of square deviations: 247003691057.49063
[2025-11-23 16:18:19] 2025-11-23 21:17:11,454 | INFO     | sum of deviations: 2381858165456.439
[2025-11-23 16:18:19] 2025-11-23 21:17:11,454 | INFO     | mean x: 1763904358.4832795
[2025-11-23 16:18:19] 2025-11-23 21:17:11,454 | INFO     | mean y: 3441521.7378640776
[2025-11-23 16:18:19] 2025-11-23 21:17:11,455 | INFO     | intersect: -17005899437.299559
[2025-11-23 16:18:19] 2025-11-23 21:17:11,456 | INFO     | chi2: 6.167832094437409
[2025-11-23 16:18:19] 2025-11-23 21:17:11,456 | INFO     | current chi2=6.167832094437409 (change=23.11416910636398 %)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,456 | INFO     | left removable region: 30
[2025-11-23 16:18:19] 2025-11-23 21:17:11,457 | INFO     | sum of square deviations: 230593936087.2537
[2025-11-23 16:18:19] 2025-11-23 21:17:11,473 | INFO     | sum of deviations: 2571192585915.503
[2025-11-23 16:18:19] 2025-11-23 21:17:11,473 | INFO     | mean x: 1763904633.0286975
[2025-11-23 16:18:19] 2025-11-23 21:17:11,473 | INFO     | mean y: 3470743.8653421635
[2025-11-23 16:18:19] 2025-11-23 21:17:11,473 | INFO     | intersect: -19664602890.94733
[2025-11-23 16:18:19] 2025-11-23 21:17:11,474 | INFO     | chi2: 1.5525772150854706
[2025-11-23 16:18:19] 2025-11-23 21:17:11,475 | INFO     | current memory leak: 11.15 B/s (using 906 data points, chi2=1.55)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | could have reported an average CPU frequency of 2675 MHz (35 samples)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | ..............................
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . Timing measurements:
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . get job = 0 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . initial setup = 12 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . payload setup = 69 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . stage-in = 1 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . payload execution = 57448 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,476 | INFO     | . stage-out = 4 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,477 | INFO     | . log creation = 0 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,477 | INFO     | ..............................
[2025-11-23 16:18:19] 2025-11-23 21:17:11,485 | INFO     | time since job start (57644s) is within the limit (172800.0s)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,485 | INFO     | 57656s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 16:18:19] 2025-11-23 21:17:11,642 | INFO     | 
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | job summary report
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | --------------------------------------------------
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | PanDA job id: 6895337275
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | task id: 47556137
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | errors: (none)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | pilot state: finished 
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | transexitcode: 0
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | exeerrorcode: 0
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | exeerrordiag: 
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | exitcode: 0
[2025-11-23 16:18:19] 2025-11-23 21:17:11,643 | INFO     | exitmsg: OK
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | cpuconsumptiontime: 258785 s
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | nevents: 1000
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | neventsw: 0
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | pid: 2017807
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | pgrp: 2017807
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | corecount: 11
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | event service: False
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | sizes: {0: 2298478, 1: 2298562, 2: 2298562, 3: 2298761, 4: 2298789, 15: 2298817, 25: 2298973, 36: 2299001, 49: 2299001, 50: 2299291, 60: 2299319, 57521: 2351436, 5
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | --------------------------------------------------
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | 
[2025-11-23 16:18:19] 2025-11-23 21:17:11,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 16:18:19] 2025-11-23 21:17:11,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,720 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:18:19] 2025-11-23 21:17:11,721 | INFO     | job 6895337275 has completed (purged errors)
[2025-11-23 16:18:19] 2025-11-23 21:17:11,721 | INFO     | overall cleanup function is called
[2025-11-23 16:18:19] 2025-11-23 21:17:12,800 | INFO     | --- collectZombieJob: --- 10, [2017807]
[2025-11-23 16:18:19] 2025-11-23 21:17:12,800 | INFO     | zombie collector waiting for pid 2017807
[2025-11-23 16:18:19] 2025-11-23 21:17:12,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:18:19] 2025-11-23 21:17:12,800 | INFO     | collected zombie processes
[2025-11-23 16:18:19] 2025-11-23 21:17:12,800 | INFO     | will attempt to kill all subprocesses of pid=2017807
[2025-11-23 16:18:19] 2025-11-23 21:17:13,417 | INFO     | PID=2008972 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 16:18:19] 2025-11-23 21:17:13,418 | INFO     | .. there are 17 such processes running
[2025-11-23 16:18:19] 2025-11-23 21:17:13,525 | INFO     | process IDs to be killed: [2017807] (in reverse order)
[2025-11-23 16:18:19] 2025-11-23 21:17:13,622 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:18:19] 2025-11-23 21:17:13,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:18:19] 2025-11-23 21:17:13,665 | INFO     | did not find any defunct processes belonging to 2017807
[2025-11-23 16:18:19] 2025-11-23 21:17:13,677 | INFO     | did not find any defunct processes belonging to 2017807
[2025-11-23 16:18:19] 2025-11-23 21:17:13,680 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:18:19] 2025-11-23 21:17:13,680 | INFO     | ready for new job
[2025-11-23 16:18:19] 2025-11-23 21:17:13,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:18:19] 2025-11-23 21:17:13,685 | INFO     | ***************************************
[2025-11-23 16:18:19] 2025-11-23 21:17:13,686 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:18:19] 2025-11-23 21:17:13,686 | INFO     | ***************************************
[2025-11-23 16:18:19] 2025-11-23 21:17:13,686 | INFO     | 
[2025-11-23 16:18:19] 2025-11-23 21:17:13,690 | INFO     | architecture information:
[2025-11-23 16:18:19] 2025-11-23 21:17:13,691 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:18:19] 2025-11-23 21:17:13,791 | INFO     | cat /etc/os-release:
[2025-11-23 16:18:19] NAME="CentOS Linux"
[2025-11-23 16:18:19] VERSION="7 (Core)"
[2025-11-23 16:18:19] ID="centos"
[2025-11-23 16:18:19] ID_LIKE="rhel fedora"
[2025-11-23 16:18:19] VERSION_ID="7"
[2025-11-23 16:18:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:18:19] ANSI_COLOR="0;31"
[2025-11-23 16:18:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:18:19] HOME_URL="https://www.centos.org/"
[2025-11-23 16:18:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:18:19] 
[2025-11-23 16:18:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:18:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:18:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:18:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:18:19] 
[2025-11-23 16:18:19] 2025-11-23 21:17:13,792 | INFO     | ***************************************
[2025-11-23 16:18:19] 2025-11-23 21:17:14,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 16:18:19] 2025-11-23 21:17:14,427 | INFO     | sufficient remaining disk space (72262615040 B)
[2025-11-23 16:18:19] 2025-11-23 21:17:14,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:18:19] 2025-11-23 21:17:14,430 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:18:19] 2025-11-23 21:17:14,430 | INFO     | update_server=False
[2025-11-23 16:18:19] 2025-11-23 21:17:14,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:18:19] 2025-11-23 21:17:14,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:18:19] 2025-11-23 21:17:14,431 | INFO     | aborting loop
[2025-11-23 16:18:19] 2025-11-23 21:17:14,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:18:19] 2025-11-23 21:17:14,843 | INFO     | all data control threads have been joined
[2025-11-23 16:18:19] 2025-11-23 21:17:15,153 | INFO     | all payload control threads have been joined
[2025-11-23 16:18:19] 2025-11-23 21:17:15,439 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,440 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,482 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,509 | INFO     | [job] validate thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,526 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,849 | INFO     | [data] control thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,923 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,947 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:15,981 | INFO     | all job control threads have been joined
[2025-11-23 16:18:19] 2025-11-23 21:17:16,172 | INFO     | [payload] control thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:16,297 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:16,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:16,438 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:16,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:18:19] 2025-11-23 21:17:16,711 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:16,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:18:19] 2025-11-23 21:17:16,987 | INFO     | [job] control thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:17,700 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:20,745 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:18:19] 2025-11-23 21:17:46,119 | INFO     | PID=2008972 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 16:18:19] 2025-11-23 21:17:46,119 | INFO     | .. there are 17 such processes running
[2025-11-23 16:18:19] 2025-11-23 21:17:46,120 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:18:19] 2025-11-23 21:17:46,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:18:19] 2025-11-23 21:17:46,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:18:19] 2025-11-23 21:18:12,749 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:18:19] 2025-11-23 21:18:13,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611759585088)>', '<ExcThread(monitor, started 140611021682432)>']
[2025-11-23 16:18:19] 2025-11-23 21:18:14,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:18:19] 2025-11-23 21:18:14,326 | INFO     | [monitor] control thread has ended
[2025-11-23 16:18:19] 2025-11-23 21:18:18,719 | INFO     | all workflow threads have been joined
[2025-11-23 16:18:19] 2025-11-23 21:18:18,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:18:19] 2025-11-23 21:18:18,719 | INFO     | traces error code: 0
[2025-11-23 16:18:19] 2025-11-23 21:18:18,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:18:19] 2025-11-23 21:18:18,982 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:18:19] 2025-11-23 21:18:19,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:18:19] 2025-11-23 21:18:19,032 [wrapper] pilotpid: 2008972
[2025-11-23 16:18:19] 2025-11-23 21:18:19,058 [wrapper] Pilot exit status: 0
[2025-11-23 16:18:19] 2025-11-23 21:18:19,226 [wrapper] pandaids: 6895337275
[2025-11-23 16:18:19] 2025-11-23 21:18:19,314 [wrapper] cleanup supervisor_pilot 3512331 2008973
[2025-11-23 16:18:19] 2025-11-23 21:18:19,319 [wrapper] Test setup, not cleaning
[2025-11-23 16:18:19] 2025-11-23 21:18:19,322 [wrapper] apfmon messages muted
[2025-11-23 16:18:19] 2025-11-23 21:18:19,326 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:18:19] 2025-11-23 21:18:19,329 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:18:19]  *** Error codes and diagnostics ***
[2025-11-23 16:18:19]     "exeErrorCode": 0,
[2025-11-23 16:18:19]     "exeErrorDiag": "",
[2025-11-23 16:18:19]     "pilotErrorCode": 0,
[2025-11-23 16:18:19]     "pilotErrorDiag": "",
[2025-11-23 16:18:19]  *** Listing of results directory ***
[2025-11-23 16:18:19] total 1311724
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:57 pilot3.tar.gz
[2025-11-23 16:18:19] -rwx------. 1 boincer umatlas     36292 Nov 22 01:24 runpilot2-wrapper.sh
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 01:24 queuedata.json
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:18:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:14 run_atlas
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:14 job.xml
[2025-11-23 16:18:19] -rw-r--r--. 2 boincer umatlas 411279295 Nov 23 00:14 EVNT.47483658._000295.pool.root.1
[2025-11-23 16:18:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:14 start_atlas.sh
[2025-11-23 16:18:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:14 shared
[2025-11-23 16:18:19] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 00:14 input.tar.gz
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:14 boinc_lockfile
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:14 pandaJob.out
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas        57 Nov 23 00:14 setup.sh.local
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas    989784 Nov 23 00:16 agis_schedconf.cvmfs.json
[2025-11-23 16:18:19] drwx------. 5 boincer umatlas      4096 Nov 23 00:16 pilot3
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas       533 Nov 23 16:02 boinc_task_state.xml
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas      6845 Nov 23 16:11 init_data.xml
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas 908446626 Nov 23 16:16 HITS.47556137._002917.pool.root.1
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas      1059 Nov 23 16:16 memory_monitor_summary.json
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas   1526164 Nov 23 16:16 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas   2435626 Nov 23 16:16 log.47556137._002917.job.log.tgz.1
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas        95 Nov 23 16:17 pilot_heartbeat.json
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas      8632 Nov 23 16:17 heartbeat.json
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 16:18 boinc_mmap_file
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas        29 Nov 23 16:18 wrapper_checkpoint.txt
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas      4824 Nov 23 16:18 pilotlog.txt
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas   7341921 Nov 23 16:18 log.47556137._002917.job.log.1
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas       353 Nov 23 16:18 output.list
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas       620 Nov 23 16:18 runtime_log
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas   9799680 Nov 23 16:18 result.tar.gz
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas       663 Nov 23 16:18 WqOODmZDwg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmL0HKDmfeZmRm.diag
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas      9355 Nov 23 16:18 runtime_log.err
[2025-11-23 16:18:19] -rw-r--r--. 1 boincer umatlas     21496 Nov 23 16:18 stderr.txt
[2025-11-23 16:18:19] HITS file was successfully produced:
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas 908446626 Nov 23 16:16 shared/HITS.pool.root.1
[2025-11-23 16:18:19]  *** Contents of shared directory: ***
[2025-11-23 16:18:19] total 1298968
[2025-11-23 16:18:19] -rw-r--r--. 2 boincer umatlas 411279295 Nov 23 00:14 ATLAS.root_0
[2025-11-23 16:18:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:14 start_atlas.sh
[2025-11-23 16:18:19] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 00:14 input.tar.gz
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas 908446626 Nov 23 16:16 HITS.pool.root.1
[2025-11-23 16:18:19] -rw-------. 1 boincer umatlas   9799680 Nov 23 16:18 result.tar.gz
16:18:21 (2002096): run_atlas exited; CPU time 259475.390148
16:18:21 (2002096): called boinc_finish(0)

</stderr_txt>
]]>

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