Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:20 (2728213): wrapper (7.7.26015): starting
00:03:20 (2728213): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:03:20] Arguments: --nthreads 9
[2025-11-24 00:03:20] Threads: 9
[2025-11-24 00:03:20] Checking for CVMFS
[2025-11-24 00:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:03:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:03:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:03:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:03:43] 2.13.3.0 42195 26585 351476 153233 1 145 27843234 32935937 21344 16776704 0 158412716 99.787 92449460 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:03:43] CVMFS is ok
[2025-11-24 00:03:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:03:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:03:43] Further information can be found at the LHC@home message board.
[2025-11-24 00:03:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:03:43] Checking for apptainer binary...
[2025-11-24 00:03:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:03:43] Running /usr/bin/apptainer --version
[2025-11-24 00:03:43] apptainer version 1.4.4-1.el9
[2025-11-24 00:03:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:03:44] c-6-3.aglt2.org
[2025-11-24 00:03:44] apptainer works
[2025-11-24 00:03:44] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:03:44] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:03:44] Starting ATLAS job with PandaID=6895337214
[2025-11-24 00:03:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:27:08]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:27:08] 2025-11-25 00:25:49,605 | INFO     | time since job start (69649s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:25:50,593 | INFO     | monitor loop #4789: job 0:6895337214 is in state 'finished'
[2025-11-24 19:27:08] 2025-11-25 00:25:50,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:27:08] 2025-11-25 00:25:51,612 | INFO     | time since job start (69651s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:25:53,109 | INFO     | monitor loop #4790: job 0:6895337214 is in state 'finished'
[2025-11-24 19:27:08] 2025-11-25 00:25:53,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:27:08] 2025-11-25 00:25:53,619 | INFO     | time since job start (69653s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:25:55,615 | INFO     | monitor loop #4791: job 0:6895337214 is in state 'finished'
[2025-11-24 19:27:08] 2025-11-25 00:25:55,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:27:08] 2025-11-25 00:25:55,644 | INFO     | time since job start (69655s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:25:57,650 | INFO     | time since job start (69657s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:25:58,120 | INFO     | monitor loop #4792: job 0:6895337214 is in state 'finished'
[2025-11-24 19:27:08] 2025-11-25 00:25:58,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:27:08] 2025-11-25 00:25:59,670 | INFO     | time since job start (69659s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:26:00,633 | INFO     | monitor loop #4793: job 0:6895337214 is in state 'finished'
[2025-11-24 19:27:08] 2025-11-25 00:26:00,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,369 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 19:27:08] 2025-11-25 00:26:01,375 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.211799999999
[2025-11-24 19:27:08] 2025-11-25 00:26:01,381 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895337214/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,382 | INFO     | extracted standard info from prmon json
[2025-11-24 19:27:08] 2025-11-25 00:26:01,382 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:27:08] 2025-11-25 00:26:01,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:27:08] 2025-11-25 00:26:01,403 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:27:08] 2025-11-25 00:26:01,405 | INFO     | sum of square deviations: 458193450261.79486
[2025-11-24 19:27:08] 2025-11-25 00:26:01,442 | INFO     | sum of deviations: 3662651841519.0835
[2025-11-24 19:27:08] 2025-11-25 00:26:01,442 | INFO     | mean x: 1763995588.8735733
[2025-11-24 19:27:08] 2025-11-25 00:26:01,443 | INFO     | mean y: 3042061.6672519753
[2025-11-24 19:27:08] 2025-11-25 00:26:01,443 | INFO     | intersect: -14097774282.01425
[2025-11-24 19:27:08] 2025-11-25 00:26:01,444 | INFO     | chi2: 25.126043430489037
[2025-11-24 19:27:08] 2025-11-25 00:26:01,446 | INFO     | sum of square deviations: 452186041090.46234
[2025-11-24 19:27:08] 2025-11-25 00:26:01,527 | INFO     | sum of deviations: 4077525296204.242
[2025-11-24 19:27:08] 2025-11-25 00:26:01,528 | INFO     | mean x: 1763995436.377425
[2025-11-24 19:27:08] 2025-11-25 00:26:01,528 | INFO     | mean y: 3052591.7283950616
[2025-11-24 19:27:08] 2025-11-25 00:26:01,528 | INFO     | intersect: -15903533106.654198
[2025-11-24 19:27:08] 2025-11-25 00:26:01,529 | INFO     | chi2: 21.751590218095068
[2025-11-24 19:27:08] 2025-11-25 00:26:01,534 | INFO     | current chi2=21.751590218095068 (change=13.43010180544089 %)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,534 | INFO     | right removable region: 1133
[2025-11-24 19:27:08] 2025-11-25 00:26:01,536 | INFO     | sum of square deviations: 452185434140.46155
[2025-11-24 19:27:08] 2025-11-25 00:26:01,662 | INFO     | sum of deviations: 3169131380398.826
[2025-11-24 19:27:08] 2025-11-25 00:26:01,662 | INFO     | mean x: 1763995741.377425
[2025-11-24 19:27:08] 2025-11-25 00:26:01,662 | INFO     | mean y: 3054587.2433862435
[2025-11-24 19:27:08] 2025-11-25 00:26:01,662 | INFO     | intersect: -12359869639.883698
[2025-11-24 19:27:08] 2025-11-25 00:26:01,671 | INFO     | chi2: 20.655416236152316
[2025-11-24 19:27:08] 2025-11-25 00:26:01,672 | INFO     | current chi2=20.655416236152316 (change=17.79280214453449 %)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,672 | INFO     | left removable region: 10
[2025-11-24 19:27:08] 2025-11-25 00:26:01,673 | INFO     | sum of square deviations: 439153862581.4109
[2025-11-24 19:27:08] 2025-11-25 00:26:01,683 | INFO     | time since job start (69661s) is within the limit (172800.0s)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,736 | INFO     | sum of deviations: 3255833012157.552
[2025-11-24 19:27:08] 2025-11-25 00:26:01,737 | INFO     | mean x: 1763995710.8860197
[2025-11-24 19:27:08] 2025-11-25 00:26:01,737 | INFO     | mean y: 3077852.7934105075
[2025-11-24 19:27:08] 2025-11-25 00:26:01,737 | INFO     | intersect: -13074970544.748203
[2025-11-24 19:27:08] 2025-11-25 00:26:01,740 | INFO     | chi2: 13.68096119374432
[2025-11-24 19:27:08] 2025-11-25 00:26:01,741 | INFO     | current memory leak: 7.41 B/s (using 1123 data points, chi2=13.68)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,742 | INFO     | could have reported an average CPU frequency of 2600 MHz (42 samples)
[2025-11-24 19:27:08] 2025-11-25 00:26:01,742 | INFO     | ..............................
[2025-11-24 19:27:08] 2025-11-25 00:26:01,742 | INFO     | . Timing measurements:
[2025-11-24 19:27:08] 2025-11-25 00:26:01,742 | INFO     | . get job = 0 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | . initial setup = 7 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | . payload setup = 58 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | . stage-in = 0 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | . payload execution = 69476 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | . stage-out = 6 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | . log creation = 2 s
[2025-11-24 19:27:08] 2025-11-25 00:26:01,743 | INFO     | ..............................
[2025-11-24 19:27:08] 2025-11-25 00:26:02,069 | INFO     | 
[2025-11-24 19:27:08] 2025-11-25 00:26:02,069 | INFO     | job summary report
[2025-11-24 19:27:08] 2025-11-25 00:26:02,069 | INFO     | --------------------------------------------------
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | PanDA job id: 6895337214
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | task id: 47556137
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | errors: (none)
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | pilot state: finished 
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | transexitcode: 0
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | exeerrorcode: 0
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | exeerrordiag: 
[2025-11-24 19:27:08] 2025-11-25 00:26:02,070 | INFO     | exitcode: 0
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | exitmsg: OK
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | cpuconsumptiontime: 303983 s
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | nevents: 1000
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | neventsw: 0
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | pid: 2742716
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | pgrp: 2742716
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | corecount: 9
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | event service: False
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | sizes: {0: 2298585, 1: 2298784, 2: 2298812, 13: 2298812, 24: 2298868, 35: 2298896, 36: 2299314, 47: 2299342, 69538: 2358117, 69545: 2367902, 69548: 2367958, 69581:
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | --------------------------------------------------
[2025-11-24 19:27:08] 2025-11-25 00:26:02,071 | INFO     | 
[2025-11-24 19:27:08] 2025-11-25 00:26:02,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 19:27:08] 2025-11-25 00:26:02,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | job 6895337214 has completed (purged errors)
[2025-11-24 19:27:08] 2025-11-25 00:26:02,294 | INFO     | overall cleanup function is called
[2025-11-24 19:27:08] 2025-11-25 00:26:03,377 | INFO     | --- collectZombieJob: --- 10, [2742716]
[2025-11-24 19:27:08] 2025-11-25 00:26:03,377 | INFO     | zombie collector waiting for pid 2742716
[2025-11-24 19:27:08] 2025-11-25 00:26:03,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:27:08] 2025-11-25 00:26:03,377 | INFO     | collected zombie processes
[2025-11-24 19:27:08] 2025-11-25 00:26:03,377 | INFO     | will attempt to kill all subprocesses of pid=2742716
[2025-11-24 19:27:08] 2025-11-25 00:26:04,076 | INFO     | process IDs to be killed: [2742716] (in reverse order)
[2025-11-24 19:27:08] 2025-11-25 00:26:04,388 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:27:08] 2025-11-25 00:26:04,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:27:08] 2025-11-25 00:26:04,422 | INFO     | did not find any defunct processes belonging to 2742716
[2025-11-24 19:27:08] 2025-11-25 00:26:04,461 | INFO     | did not find any defunct processes belonging to 2742716
[2025-11-24 19:27:08] 2025-11-25 00:26:04,462 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:27:08] 2025-11-25 00:26:04,463 | INFO     | ready for new job
[2025-11-24 19:27:08] 2025-11-25 00:26:04,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:27:08] 2025-11-25 00:26:04,470 | INFO     | ***************************************
[2025-11-24 19:27:08] 2025-11-25 00:26:04,470 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:27:08] 2025-11-25 00:26:04,471 | INFO     | ***************************************
[2025-11-24 19:27:08] 2025-11-25 00:26:04,471 | INFO     | 
[2025-11-24 19:27:08] 2025-11-25 00:26:04,473 | INFO     | architecture information:
[2025-11-24 19:27:08] 2025-11-25 00:26:04,474 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:27:08] 2025-11-25 00:26:04,562 | INFO     | cat /etc/os-release:
[2025-11-24 19:27:08] NAME="CentOS Linux"
[2025-11-24 19:27:08] VERSION="7 (Core)"
[2025-11-24 19:27:08] ID="centos"
[2025-11-24 19:27:08] ID_LIKE="rhel fedora"
[2025-11-24 19:27:08] VERSION_ID="7"
[2025-11-24 19:27:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:27:08] ANSI_COLOR="0;31"
[2025-11-24 19:27:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:27:08] HOME_URL="https://www.centos.org/"
[2025-11-24 19:27:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:27:08] 
[2025-11-24 19:27:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:27:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:27:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:27:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:27:08] 
[2025-11-24 19:27:08] 2025-11-25 00:26:04,562 | INFO     | ***************************************
[2025-11-24 19:27:08] 2025-11-25 00:26:05,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 19:27:08] 2025-11-25 00:26:05,128 | INFO     | sufficient remaining disk space (71481425920 B)
[2025-11-24 19:27:08] 2025-11-25 00:26:05,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:27:08] 2025-11-25 00:26:05,129 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:27:08] 2025-11-25 00:26:05,129 | INFO     | update_server=False
[2025-11-24 19:27:08] 2025-11-25 00:26:05,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:27:08] 2025-11-25 00:26:05,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:27:08] 2025-11-25 00:26:05,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:27:08] 2025-11-25 00:26:05,130 | INFO     | aborting loop
[2025-11-24 19:27:08] 2025-11-25 00:26:05,185 | INFO     | all job control threads have been joined
[2025-11-24 19:27:08] 2025-11-25 00:26:06,021 | INFO     | all data control threads have been joined
[2025-11-24 19:27:08] 2025-11-25 00:26:06,142 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,145 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,170 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,180 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,191 | INFO     | [job] control thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,443 | INFO     | all payload control threads have been joined
[2025-11-24 19:27:08] 2025-11-25 00:26:06,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,640 | INFO     | [job] validate thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,672 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,871 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:06,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:27:08] 2025-11-25 00:26:06,982 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:07,027 | INFO     | [data] control thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:07,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:27:08] 2025-11-25 00:26:07,136 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:07,450 | INFO     | [payload] control thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:07,575 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:08,037 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:10,934 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:27:08] 2025-11-25 00:26:35,531 | INFO     | PID=2733434 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:27:08] 2025-11-25 00:26:35,531 | INFO     | .. there are 44 such processes running
[2025-11-24 19:27:08] 2025-11-25 00:26:35,532 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:27:08] 2025-11-25 00:26:35,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:27:08] 2025-11-25 00:26:35,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:27:08] 2025-11-25 00:27:00,655 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:27:08] 2025-11-25 00:27:01,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325334488896)>', '<ExcThread(monitor, started 140324668159744)>']
[2025-11-24 19:27:08] 2025-11-25 00:27:02,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:27:08] 2025-11-25 00:27:02,791 | INFO     | [monitor] control thread has ended
[2025-11-24 19:27:08] 2025-11-25 00:27:07,039 | INFO     | all workflow threads have been joined
[2025-11-24 19:27:08] 2025-11-25 00:27:07,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:27:08] 2025-11-25 00:27:07,039 | INFO     | traces error code: 0
[2025-11-24 19:27:08] 2025-11-25 00:27:07,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:27:08] 2025-11-25 00:27:07,391 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:27:08] 2025-11-25 00:27:07,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:27:08] 2025-11-25 00:27:07,401 [wrapper] pilotpid: 2733434
[2025-11-24 19:27:08] 2025-11-25 00:27:07,404 [wrapper] Pilot exit status: 0
[2025-11-24 19:27:08] 2025-11-25 00:27:07,440 [wrapper] pandaids: 6895337214
[2025-11-24 19:27:08] 2025-11-25 00:27:07,562 [wrapper] cleanup supervisor_pilot 2791531 2733435
[2025-11-24 19:27:08] 2025-11-25 00:27:07,608 [wrapper] Test setup, not cleaning
[2025-11-24 19:27:08] 2025-11-25 00:27:07,666 [wrapper] apfmon messages muted
[2025-11-24 19:27:08] 2025-11-25 00:27:07,685 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:27:08] 2025-11-25 00:27:07,702 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:27:08]  *** Error codes and diagnostics ***
[2025-11-24 19:27:08]     "exeErrorCode": 0,
[2025-11-24 19:27:08]     "exeErrorDiag": "",
[2025-11-24 19:27:08]     "pilotErrorCode": 0,
[2025-11-24 19:27:08]     "pilotErrorDiag": "",
[2025-11-24 19:27:08]  *** Listing of results directory ***
[2025-11-24 19:27:08] total 1325604
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:57 pilot3.tar.gz
[2025-11-24 19:27:08] -rwx------. 1 boincer umatlas     36292 Nov 22 01:03 runpilot2-wrapper.sh
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 01:03 queuedata.json
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:27:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:03 run_atlas
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:03 job.xml
[2025-11-24 19:27:08] -rw-r--r--. 2 boincer umatlas 409587652 Nov 24 00:03 EVNT.47483658._000293.pool.root.1
[2025-11-24 19:27:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:03 start_atlas.sh
[2025-11-24 19:27:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:03 shared
[2025-11-24 19:27:08] -rw-r--r--. 2 boincer umatlas    590093 Nov 24 00:03 input.tar.gz
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:03 boinc_lockfile
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:03 pandaJob.out
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas        57 Nov 24 00:03 setup.sh.local
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas    989786 Nov 24 00:04 agis_schedconf.cvmfs.json
[2025-11-24 19:27:08] drwx------. 5 boincer umatlas      4096 Nov 24 00:05 pilot3
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas       533 Nov 24 18:58 boinc_task_state.xml
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas      6656 Nov 24 19:22 init_data.xml
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas 919890154 Nov 24 19:24 HITS.47556137._002892.pool.root.1
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas      1064 Nov 24 19:25 memory_monitor_summary.json
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:25 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas   2433003 Nov 24 19:25 log.47556137._002892.job.log.tgz.1
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas        95 Nov 24 19:25 pilot_heartbeat.json
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas      8642 Nov 24 19:26 heartbeat.json
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:27 wrapper_checkpoint.txt
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas      4824 Nov 24 19:27 pilotlog.txt
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas   9577507 Nov 24 19:27 log.47556137._002892.job.log.1
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas       353 Nov 24 19:27 output.list
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:27 runtime_log
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas  12032000 Nov 24 19:27 result.tar.gz
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas      9328 Nov 24 19:27 runtime_log.err
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas       658 Nov 24 19:27 Or6NDmatvg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJ1JKDmHst0Dn.diag
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas     21819 Nov 24 19:27 stderr.txt
[2025-11-24 19:27:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:27 boinc_mmap_file
[2025-11-24 19:27:08] HITS file was successfully produced:
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas 919890154 Nov 24 19:24 shared/HITS.pool.root.1
[2025-11-24 19:27:08]  *** Contents of shared directory: ***
[2025-11-24 19:27:08] total 1310676
[2025-11-24 19:27:08] -rw-r--r--. 2 boincer umatlas 409587652 Nov 24 00:03 ATLAS.root_0
[2025-11-24 19:27:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:03 start_atlas.sh
[2025-11-24 19:27:08] -rw-r--r--. 2 boincer umatlas    590093 Nov 24 00:03 input.tar.gz
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas 919890154 Nov 24 19:24 HITS.pool.root.1
[2025-11-24 19:27:08] -rw-------. 1 boincer umatlas  12032000 Nov 24 19:27 result.tar.gz
19:27:09 (2728213): run_atlas exited; CPU time 305744.998169
19:27:09 (2728213): called boinc_finish(0)

</stderr_txt>
]]>

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