Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:27:18 (20966): wrapper (7.7.26015): starting
00:27:18 (20966): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:27:18] Arguments: --nthreads 8
[2025-11-26 00:27:18] Threads: 8
[2025-11-26 00:27:18] Checking for CVMFS
[2025-11-26 00:27:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:27:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:27:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:27:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:27:20] 2.11.2.0 19422 284569 141420 153302 1 84 24334118 25165825 4264 130560 12 138227032 99.872 84524699 2890 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 00:27:20] CVMFS is ok
[2025-11-26 00:27:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:27:20] Checking for apptainer binary...
[2025-11-26 00:27:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:27:20] Running /usr/bin/apptainer --version
[2025-11-26 00:27:21] apptainer version 1.3.2-1.el7
[2025-11-26 00:27:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:27:43] cg-vwn320.simple-grid.lan
[2025-11-26 00:27:43] apptainer works
[2025-11-26 00:27:43] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:27:43] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:27:44] Starting ATLAS job with PandaID=6893834907
[2025-11-26 00:27:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:39:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:39:12] 2025-11-26 23:38:16,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:39:12] 2025-11-26 23:38:16,893 | INFO     | time since job start (86803s) is within the limit (172800.0s)
[2025-11-27 00:39:12] 2025-11-26 23:38:18,749 | INFO     | monitor loop #5845: job 0:6893834907 is in state 'finished'
[2025-11-27 00:39:12] 2025-11-26 23:38:18,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:39:12] 2025-11-26 23:38:18,900 | INFO     | time since job start (86805s) is within the limit (172800.0s)
[2025-11-27 00:39:12] 2025-11-26 23:38:20,907 | INFO     | time since job start (86807s) is within the limit (172800.0s)
[2025-11-27 00:39:12] 2025-11-26 23:38:21,256 | INFO     | monitor loop #5846: job 0:6893834907 is in state 'finished'
[2025-11-27 00:39:12] 2025-11-26 23:38:21,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:39:12] 2025-11-26 23:38:22,913 | INFO     | time since job start (86809s) is within the limit (172800.0s)
[2025-11-27 00:39:12] 2025-11-26 23:38:23,760 | INFO     | monitor loop #5847: job 0:6893834907 is in state 'finished'
[2025-11-27 00:39:12] 2025-11-26 23:38:23,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:39:12] 2025-11-26 23:38:24,920 | INFO     | time since job start (86811s) is within the limit (172800.0s)
[2025-11-27 00:39:12] 2025-11-26 23:38:25,986 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:39:12] 2025-11-26 23:38:25,987 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 00:39:12] 2025-11-26 23:38:25,988 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893834907/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:39:12] 2025-11-26 23:38:25,989 | INFO     | extracted standard info from prmon json
[2025-11-27 00:39:12] 2025-11-26 23:38:25,989 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:39:12] 2025-11-26 23:38:25,989 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:39:12] 2025-11-26 23:38:26,020 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:39:12] 2025-11-26 23:38:26,023 | INFO     | sum of square deviations: 874790164859.3127
[2025-11-27 00:39:12] 2025-11-26 23:38:26,159 | INFO     | sum of deviations: 3541160572364.643
[2025-11-27 00:39:12] 2025-11-26 23:38:26,159 | INFO     | mean x: 1764157089.0828025
[2025-11-27 00:39:12] 2025-11-26 23:38:26,159 | INFO     | mean y: 2852573.0799716916
[2025-11-27 00:39:12] 2025-11-26 23:38:26,159 | INFO     | intersect: -7138475459.937288
[2025-11-27 00:39:12] 2025-11-26 23:38:26,161 | INFO     | chi2: 19.54269845039649
[2025-11-27 00:39:12] 2025-11-26 23:38:26,163 | INFO     | sum of square deviations: 865536913813.4287
[2025-11-27 00:39:12] 2025-11-26 23:38:26,279 | INFO     | monitor loop #5848: job 0:6893834907 is in state 'finished'
[2025-11-27 00:39:12] 2025-11-26 23:38:26,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:39:12] 2025-11-26 23:38:26,345 | INFO     | PID=24731 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:39:12] 2025-11-26 23:38:26,345 | INFO     | .. there are 9 such processes running
[2025-11-27 00:39:12] 2025-11-26 23:38:26,372 | INFO     | sum of deviations: 4031422368452.7095
[2025-11-27 00:39:12] 2025-11-26 23:38:26,372 | INFO     | mean x: 1764156936.5866477
[2025-11-27 00:39:12] 2025-11-26 23:38:26,372 | INFO     | mean y: 2860652.7933238638
[2025-11-27 00:39:12] 2025-11-26 23:38:26,373 | INFO     | intersect: -8214075704.4115
[2025-11-27 00:39:12] 2025-11-26 23:38:26,374 | INFO     | chi2: 16.114669441693152
[2025-11-27 00:39:12] 2025-11-26 23:38:26,374 | INFO     | current chi2=16.114669441693152 (change=17.541226547625456 %)
[2025-11-27 00:39:12] 2025-11-26 23:38:26,375 | INFO     | right removable region: 1407
[2025-11-27 00:39:12] 2025-11-26 23:38:26,376 | INFO     | sum of square deviations: 865535980513.4288
[2025-11-27 00:39:12] 2025-11-26 23:38:26,466 | INFO     | sum of deviations: 2943390272367.8945
[2025-11-27 00:39:12] 2025-11-26 23:38:26,466 | INFO     | mean x: 1764157241.5866477
[2025-11-27 00:39:12] 2025-11-26 23:38:26,466 | INFO     | mean y: 2862423.4517045454
[2025-11-27 00:39:12] 2025-11-26 23:38:26,467 | INFO     | intersect: -5996429784.751247
[2025-11-27 00:39:12] 2025-11-26 23:38:26,468 | INFO     | chi2: 14.776899008110277
[2025-11-27 00:39:12] 2025-11-26 23:38:26,468 | INFO     | current chi2=14.776899008110277 (change=24.386598679720827 %)
[2025-11-27 00:39:12] 2025-11-26 23:38:26,473 | INFO     | left removable region: 10
[2025-11-27 00:39:12] 2025-11-26 23:38:26,475 | INFO     | sum of square deviations: 845408090856.3378
[2025-11-27 00:39:12] 2025-11-26 23:38:26,597 | INFO     | sum of deviations: 3026922880549.447
[2025-11-27 00:39:12] 2025-11-26 23:38:26,598 | INFO     | mean x: 1764157211.095204
[2025-11-27 00:39:12] 2025-11-26 23:38:26,598 | INFO     | mean y: 2880757.485325698
[2025-11-27 00:39:12] 2025-11-26 23:38:26,598 | INFO     | intersect: -6313557285.757635
[2025-11-27 00:39:12] 2025-11-26 23:38:26,600 | INFO     | chi2: 7.255910078603493
[2025-11-27 00:39:12] 2025-11-26 23:38:26,600 | INFO     | current memory leak: 3.58 B/s (using 1397 data points, chi2=7.26)
[2025-11-27 00:39:12] 2025-11-26 23:38:26,601 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | ..............................
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . Timing measurements:
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . get job = 0 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . initial setup = 14 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . payload setup = 166 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . stage-in = 0 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . payload execution = 86335 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,602 | INFO     | . stage-out = 5 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,603 | INFO     | . log creation = 2 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,603 | INFO     | ..............................
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | 
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | job summary report
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | --------------------------------------------------
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | PanDA job id: 6893834907
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | task id: 47523449
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | errors: (none)
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:39:12] 2025-11-26 23:38:26,728 | INFO     | pilot state: finished 
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | transexitcode: 0
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | exeerrorcode: 0
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | exeerrordiag: 
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | exitcode: 0
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | exitmsg: OK
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | cpuconsumptiontime: 325370 s
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | nevents: 1000
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | neventsw: 0
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | pid: 31316
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | pgrp: 31316
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | corecount: 8
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | event service: False
[2025-11-27 00:39:12] 2025-11-26 23:38:26,729 | INFO     | sizes: {0: 2283483, 1: 2284168, 2: 2284367, 13: 2284367, 24: 2284423, 34: 2284451, 45: 2284607, 56: 2284635, 66: 2284663, 77: 2284691, 88: 2284747, 99: 2285055, 10
[2025-11-27 00:39:12] 2025-11-26 23:38:26,730 | INFO     | --------------------------------------------------
[2025-11-27 00:39:12] 2025-11-26 23:38:26,730 | INFO     | 
[2025-11-27 00:39:12] 2025-11-26 23:38:26,730 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-27 00:39:12] 2025-11-26 23:38:27,215 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,216 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,216 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,216 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:39:12] 2025-11-26 23:38:27,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:39:12] 2025-11-26 23:38:27,218 | INFO     | job 6893834907 has completed (purged errors)
[2025-11-27 00:39:12] 2025-11-26 23:38:27,218 | INFO     | overall cleanup function is called
[2025-11-27 00:39:12] 2025-11-26 23:38:28,242 | INFO     | --- collectZombieJob: --- 10, [31316]
[2025-11-27 00:39:12] 2025-11-26 23:38:28,242 | INFO     | zombie collector waiting for pid 31316
[2025-11-27 00:39:12] 2025-11-26 23:38:28,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:39:12] 2025-11-26 23:38:28,242 | INFO     | collected zombie processes
[2025-11-27 00:39:12] 2025-11-26 23:38:28,242 | INFO     | will attempt to kill all subprocesses of pid=31316
[2025-11-27 00:39:12] 2025-11-26 23:38:28,354 | INFO     | process IDs to be killed: [31316] (in reverse order)
[2025-11-27 00:39:12] 2025-11-26 23:38:28,920 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:39:12] 2025-11-26 23:38:28,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:39:12] 2025-11-26 23:38:28,923 | INFO     | did not find any defunct processes belonging to 31316
[2025-11-27 00:39:12] 2025-11-26 23:38:28,926 | INFO     | did not find any defunct processes belonging to 31316
[2025-11-27 00:39:12] 2025-11-26 23:38:28,948 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:39:12] 2025-11-26 23:38:28,949 | INFO     | ready for new job
[2025-11-27 00:39:12] 2025-11-26 23:38:28,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:39:12] 2025-11-26 23:38:28,954 | INFO     | ***************************************
[2025-11-27 00:39:12] 2025-11-26 23:38:28,954 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:39:12] 2025-11-26 23:38:28,954 | INFO     | ***************************************
[2025-11-27 00:39:12] 2025-11-26 23:38:28,954 | INFO     | 
[2025-11-27 00:39:12] 2025-11-26 23:38:28,955 | INFO     | pilot is running in a VM
[2025-11-27 00:39:12] 2025-11-26 23:38:28,955 | INFO     | architecture information:
[2025-11-27 00:39:12] 2025-11-26 23:38:28,955 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:39:12] 2025-11-26 23:38:29,003 | INFO     | cat /etc/os-release:
[2025-11-27 00:39:12] NAME="CentOS Linux"
[2025-11-27 00:39:12] VERSION="7 (Core)"
[2025-11-27 00:39:12] ID="centos"
[2025-11-27 00:39:12] ID_LIKE="rhel fedora"
[2025-11-27 00:39:12] VERSION_ID="7"
[2025-11-27 00:39:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:39:12] ANSI_COLOR="0;31"
[2025-11-27 00:39:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:39:12] HOME_URL="https://www.centos.org/"
[2025-11-27 00:39:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:39:12] 
[2025-11-27 00:39:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:39:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:39:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:39:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:39:12] 
[2025-11-27 00:39:12] 2025-11-26 23:38:29,004 | INFO     | ***************************************
[2025-11-27 00:39:12] 2025-11-26 23:38:29,508 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-27 00:39:12] 2025-11-26 23:38:29,789 | INFO     | sufficient remaining disk space (495428042752 B)
[2025-11-27 00:39:12] 2025-11-26 23:38:29,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:39:12] 2025-11-26 23:38:29,789 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:39:12] 2025-11-26 23:38:29,789 | INFO     | update_server=False
[2025-11-27 00:39:12] 2025-11-26 23:38:29,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:39:12] 2025-11-26 23:38:29,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:39:12] 2025-11-26 23:38:29,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:39:12] 2025-11-26 23:38:29,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:39:12] 2025-11-26 23:38:29,796 | INFO     | aborting loop
[2025-11-27 00:39:12] 2025-11-26 23:38:29,980 | INFO     | all payload control threads have been joined
[2025-11-27 00:39:12] 2025-11-26 23:38:30,392 | INFO     | all data control threads have been joined
[2025-11-27 00:39:12] 2025-11-26 23:38:30,795 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:30,802 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:30,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:30,986 | INFO     | [payload] control thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,131 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,150 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,221 | INFO     | all job control threads have been joined
[2025-11-27 00:39:12] 2025-11-26 23:38:31,402 | INFO     | [data] control thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:39:12] 2025-11-26 23:38:31,786 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,797 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,880 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,884 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:31,914 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:32,048 | INFO     | [job] validate thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:32,227 | INFO     | [job] control thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:32,748 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:33,800 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:39:12] 2025-11-26 23:38:58,493 | INFO     | PID=24731 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:39:12] 2025-11-26 23:38:58,493 | INFO     | .. there are 9 such processes running
[2025-11-27 00:39:12] 2025-11-26 23:38:58,494 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:39:12] 2025-11-26 23:38:58,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:39:12] 2025-11-26 23:38:58,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:39:12] 2025-11-26 23:39:04,382 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:39:12] 2025-11-26 23:39:06,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971800074048)>', '<ExcThread(monitor, started 139971222558464)>']
[2025-11-27 00:39:12] 2025-11-26 23:39:06,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:39:12] 2025-11-26 23:39:06,542 | INFO     | [monitor] control thread has ended
[2025-11-27 00:39:12] 2025-11-26 23:39:11,439 | INFO     | all workflow threads have been joined
[2025-11-27 00:39:12] 2025-11-26 23:39:11,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:39:12] 2025-11-26 23:39:11,439 | INFO     | traces error code: 0
[2025-11-27 00:39:12] 2025-11-26 23:39:11,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:39:12] 2025-11-26 23:39:11,568 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:39:12] 2025-11-26 23:39:11,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:39:12] 2025-11-26 23:39:11,582 [wrapper] pilotpid: 24731
[2025-11-27 00:39:12] 2025-11-26 23:39:11,584 [wrapper] Pilot exit status: 0
[2025-11-27 00:39:12] 2025-11-26 23:39:11,602 [wrapper] pandaids: 6893834907
[2025-11-27 00:39:12] 2025-11-26 23:39:11,638 [wrapper] cleanup supervisor_pilot 18222 24732
[2025-11-27 00:39:12] 2025-11-26 23:39:11,649 [wrapper] Test setup, not cleaning
[2025-11-27 00:39:12] 2025-11-26 23:39:11,653 [wrapper] apfmon messages muted
[2025-11-27 00:39:12] 2025-11-26 23:39:11,661 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:39:12] 2025-11-26 23:39:11,671 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:39:12]  *** Error codes and diagnostics ***
[2025-11-27 00:39:12]     "exeErrorCode": 0,
[2025-11-27 00:39:12]     "exeErrorDiag": "",
[2025-11-27 00:39:12]     "pilotErrorCode": 0,
[2025-11-27 00:39:12]     "pilotErrorDiag": "",
[2025-11-27 00:39:12]  *** Listing of results directory ***
[2025-11-27 00:39:12] total 1323808
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-27 00:39:12] -rwx------. 1 boinc boinc     36292 Nov 20 11:14 runpilot2-wrapper.sh
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:15 queuedata.json
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc       100 Nov 26 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:39:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 00:27 run_atlas
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc       105 Nov 26 00:27 job.xml
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc      6391 Nov 26 00:27 init_data.xml
[2025-11-27 00:39:12] -rw-r--r--. 2 boinc boinc 410513501 Nov 26 00:27 EVNT.47493127._000075.pool.root.1
[2025-11-27 00:39:12] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:27 start_atlas.sh
[2025-11-27 00:39:12] drwxrwx--x. 2 boinc boinc        68 Nov 26 00:27 shared
[2025-11-27 00:39:12] -rw-r--r--. 2 boinc boinc    590100 Nov 26 00:27 input.tar.gz
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc         0 Nov 26 00:27 boinc_lockfile
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc      2784 Nov 26 00:27 pandaJob.out
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc    991877 Nov 26 00:31 agis_schedconf.cvmfs.json
[2025-11-27 00:39:12] drwx------. 5 boinc boinc      4096 Nov 26 00:31 pilot3
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc       533 Nov 27 00:16 boinc_task_state.xml
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc 913077462 Nov 27 00:35 HITS.47523449._000749.pool.root.1
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc      1031 Nov 27 00:36 memory_monitor_summary.json
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc   1516240 Nov 27 00:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc   2485274 Nov 27 00:36 log.47523449._000749.job.log.tgz.1
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc      8639 Nov 27 00:38 heartbeat.json
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc      8192 Nov 27 00:38 boinc_mmap_file
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc        29 Nov 27 00:38 wrapper_checkpoint.txt
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc        95 Nov 27 00:38 pilot_heartbeat.json
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc      4884 Nov 27 00:39 pilotlog.txt
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc  11554621 Nov 27 00:39 log.47523449._000749.job.log.1
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc       353 Nov 27 00:39 output.list
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc       620 Nov 27 00:39 runtime_log
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc  14059520 Nov 27 00:39 result.tar.gz
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc      8817 Nov 27 00:39 runtime_log.err
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc       662 Nov 27 00:39 mV6LDmcrGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbEHKDmvUGaXo.diag
[2025-11-27 00:39:12] -rw-r--r--. 1 boinc boinc     21522 Nov 27 00:39 stderr.txt
[2025-11-27 00:39:12] HITS file was successfully produced:
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc 913077462 Nov 27 00:35 shared/HITS.pool.root.1
[2025-11-27 00:39:12]  *** Contents of shared directory: ***
[2025-11-27 00:39:12] total 1306904
[2025-11-27 00:39:12] -rw-r--r--. 2 boinc boinc 410513501 Nov 26 00:27 ATLAS.root_0
[2025-11-27 00:39:12] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:27 start_atlas.sh
[2025-11-27 00:39:12] -rw-r--r--. 2 boinc boinc    590100 Nov 26 00:27 input.tar.gz
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc 913077462 Nov 27 00:35 HITS.pool.root.1
[2025-11-27 00:39:12] -rw-------. 1 boinc boinc  14059520 Nov 27 00:39 result.tar.gz
00:39:13 (20966): run_atlas exited; CPU time 326012.215133
00:39:13 (20966): called boinc_finish(0)

</stderr_txt>
]]>

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