Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:11 (3705665): wrapper (7.7.26015): starting
00:02:11 (3705665): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:02:11] Arguments: --nthreads 9
[2025-11-23 00:02:11] Threads: 9
[2025-11-23 00:02:11] Checking for CVMFS
[2025-11-23 00:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:02:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:02:13] 2.13.2.0 12166 31076 270268 153197 3 93 33957784 40960001 21984 16776704 0 53544061 99.711 35226573 34326 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:02:13] CVMFS is ok
[2025-11-23 00:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:02:13] Further information can be found at the LHC@home message board.
[2025-11-23 00:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:02:13] Checking for apptainer binary...
[2025-11-23 00:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:02:13] Running /usr/bin/apptainer --version
[2025-11-23 00:02:13] apptainer version 1.4.4-1.el9
[2025-11-23 00:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:02:14] c-211-33-1.aglt2.org
[2025-11-23 00:02:14] apptainer works
[2025-11-23 00:02:14] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:02:14] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:02:14] Starting ATLAS job with PandaID=6895337168
[2025-11-23 00:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:55:03]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:55:03] 2025-11-24 11:15:57,496 | INFO     | time since job start (108764s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:15:58,518 | INFO     | monitor loop #6385: job 0:6895337168 is in state 'finished'
[2025-11-24 07:55:03] 2025-11-24 11:15:58,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:55:03] 2025-11-24 11:15:59,503 | INFO     | time since job start (108766s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:16:01,023 | INFO     | monitor loop #6386: job 0:6895337168 is in state 'finished'
[2025-11-24 07:55:03] 2025-11-24 11:16:01,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:55:03] 2025-11-24 11:16:01,512 | INFO     | time since job start (108768s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:16:03,519 | INFO     | time since job start (108770s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:16:03,528 | INFO     | monitor loop #6387: job 0:6895337168 is in state 'finished'
[2025-11-24 07:55:03] 2025-11-24 11:16:03,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:55:03] 2025-11-24 11:16:05,544 | INFO     | time since job start (108772s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:16:06,033 | INFO     | monitor loop #6388: job 0:6895337168 is in state 'finished'
[2025-11-24 07:55:03] 2025-11-24 11:16:06,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:55:03] 2025-11-24 11:16:07,551 | INFO     | time since job start (108774s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:16:08,293 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 07:55:03] 2025-11-24 11:16:08,379 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2565.7243437499997
[2025-11-24 07:55:03] 2025-11-24 11:16:08,483 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6895337168/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 07:55:03] 2025-11-24 11:16:08,504 | INFO     | extracted standard info from prmon json
[2025-11-24 07:55:03] 2025-11-24 11:16:08,504 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 07:55:03] 2025-11-24 11:16:08,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 07:55:03] 2025-11-24 11:16:08,643 | INFO     | monitor loop #6389: job 0:6895337168 is in state 'finished'
[2025-11-24 07:55:03] 2025-11-24 11:16:08,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:55:03] 2025-11-24 11:16:08,699 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:55:03] 2025-11-24 11:16:08,718 | INFO     | sum of square deviations: 1751753452802.3079
[2025-11-24 07:55:03] 2025-11-24 11:16:09,109 | INFO     | sum of deviations: 6111880310201.8125
[2025-11-24 07:55:03] 2025-11-24 11:16:09,127 | INFO     | mean x: 1763928614.3559797
[2025-11-24 07:55:03] 2025-11-24 11:16:09,127 | INFO     | mean y: 3026159.145423919
[2025-11-24 07:55:03] 2025-11-24 11:16:09,127 | INFO     | intersect: -6151333376.688497
[2025-11-24 07:55:03] 2025-11-24 11:16:09,129 | INFO     | chi2: 22.617490224004708
[2025-11-24 07:55:03] 2025-11-24 11:16:09,156 | INFO     | sum of square deviations: 1737045573147.731
[2025-11-24 07:55:03] 2025-11-24 11:16:09,521 | INFO     | sum of deviations: 6792462839197.807
[2025-11-24 07:55:03] 2025-11-24 11:16:09,522 | INFO     | mean x: 1763928461.8783784
[2025-11-24 07:55:03] 2025-11-24 11:16:09,522 | INFO     | mean y: 3033213.8277027025
[2025-11-24 07:55:03] 2025-11-24 11:16:09,522 | INFO     | intersect: -6894551232.73376
[2025-11-24 07:55:03] 2025-11-24 11:16:09,544 | INFO     | chi2: 18.78136541407018
[2025-11-24 07:55:03] 2025-11-24 11:16:09,545 | INFO     | current chi2=18.78136541407018 (change=16.96087749764171 %)
[2025-11-24 07:55:03] 2025-11-24 11:16:09,545 | INFO     | right removable region: 1775
[2025-11-24 07:55:03] 2025-11-24 11:16:09,547 | INFO     | sum of square deviations: 1737036712012.2166
[2025-11-24 07:55:03] 2025-11-24 11:16:09,625 | INFO     | time since job start (108776s) is within the limit (172800.0s)
[2025-11-24 07:55:03] 2025-11-24 11:16:09,785 | INFO     | sum of deviations: 5424457141598.124
[2025-11-24 07:55:03] 2025-11-24 11:16:09,785 | INFO     | mean x: 1763928766.8795044
[2025-11-24 07:55:03] 2025-11-24 11:16:09,786 | INFO     | mean y: 3033282.2201576577
[2025-11-24 07:55:03] 2025-11-24 11:16:09,786 | INFO     | intersect: -5505402970.509201
[2025-11-24 07:55:03] 2025-11-24 11:16:09,788 | INFO     | chi2: 19.25167703916286
[2025-11-24 07:55:03] 2025-11-24 11:16:09,788 | INFO     | current chi2=19.25167703916286 (change=14.881461875330428 %)
[2025-11-24 07:55:03] 2025-11-24 11:16:09,788 | INFO     | left removable region: 10
[2025-11-24 07:55:03] 2025-11-24 11:16:09,790 | INFO     | sum of square deviations: 1704961222086.4656
[2025-11-24 07:55:03] 2025-11-24 11:16:09,851 | INFO     | sum of deviations: 5880332031832.87
[2025-11-24 07:55:03] 2025-11-24 11:16:09,851 | INFO     | mean x: 1763928736.4294617
[2025-11-24 07:55:03] 2025-11-24 11:16:09,852 | INFO     | mean y: 3045350.083286119
[2025-11-24 07:55:03] 2025-11-24 11:16:09,852 | INFO     | intersect: -6080662898.719695
[2025-11-24 07:55:03] 2025-11-24 11:16:09,854 | INFO     | chi2: 13.9072977129455
[2025-11-24 07:55:03] 2025-11-24 11:16:09,854 | INFO     | current memory leak: 3.45 B/s (using 1765 data points, chi2=13.91)
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | could have reported an average CPU frequency of 2566 MHz (63 samples)
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | ..............................
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | . Timing measurements:
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | . get job = 0 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | . initial setup = 5 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | . payload setup = 37 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | . stage-in = 0 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,856 | INFO     | . payload execution = 108618 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,857 | INFO     | . stage-out = 14 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,857 | INFO     | . log creation = 5 s
[2025-11-24 07:55:03] 2025-11-24 11:16:09,857 | INFO     | ..............................
[2025-11-24 07:55:03] 2025-11-24 11:16:10,450 | INFO     | 
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | job summary report
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | --------------------------------------------------
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | PanDA job id: 6895337168
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | task id: 47556149
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | errors: (none)
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | pilot state: finished 
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | transexitcode: 0
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | exeerrorcode: 0
[2025-11-24 07:55:03] 2025-11-24 11:16:10,451 | INFO     | exeerrordiag: 
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | exitcode: 0
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | exitmsg: OK
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | cpuconsumptiontime: 285926 s
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | nevents: 1000
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | neventsw: 0
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | pid: 3756091
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | pgrp: 3756091
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | corecount: 9
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | event service: False
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | sizes: {0: 2298633, 1: 2298832, 2: 2298832, 12: 2298860, 23: 2298888, 29: 2299178, 34: 2299334, 108661: 2372501, 108677: 2381495, 108681: 2381551, 108715: 2381797}
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | --------------------------------------------------
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | 
[2025-11-24 07:55:03] 2025-11-24 11:16:10,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-24 07:55:03] 2025-11-24 11:16:10,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:55:03] 2025-11-24 11:16:10,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:55:03] 2025-11-24 11:16:10,514 | INFO     | job 6895337168 has completed (purged errors)
[2025-11-24 07:55:03] 2025-11-24 11:16:10,514 | INFO     | overall cleanup function is called
[2025-11-24 07:55:03] 2025-11-24 11:16:11,585 | INFO     | --- collectZombieJob: --- 10, [3756091]
[2025-11-24 07:55:03] 2025-11-24 11:16:11,585 | INFO     | zombie collector waiting for pid 3756091
[2025-11-24 07:55:03] 2025-11-24 11:16:11,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:55:03] 2025-11-24 11:16:11,585 | INFO     | collected zombie processes
[2025-11-24 07:55:03] 2025-11-24 11:16:11,585 | INFO     | will attempt to kill all subprocesses of pid=3756091
[2025-11-24 07:55:03] 2025-11-24 11:16:13,693 | INFO     | process IDs to be killed: [3756091] (in reverse order)
[2025-11-24 07:55:03] 2025-11-24 11:16:14,093 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:55:03] 2025-11-24 11:16:14,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:55:03] 2025-11-24 11:16:14,142 | INFO     | did not find any defunct processes belonging to 3756091
[2025-11-24 07:55:03] 2025-11-24 11:16:14,161 | INFO     | did not find any defunct processes belonging to 3756091
[2025-11-24 07:55:03] 2025-11-24 11:16:14,182 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:55:03] 2025-11-24 11:16:14,182 | INFO     | ready for new job
[2025-11-24 07:55:03] 2025-11-24 11:16:14,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:55:03] 2025-11-24 11:16:14,217 | INFO     | ***************************************
[2025-11-24 07:55:03] 2025-11-24 11:16:14,244 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:55:03] 2025-11-24 11:16:14,245 | INFO     | ***************************************
[2025-11-24 07:55:03] 2025-11-24 11:16:14,245 | INFO     | 
[2025-11-24 07:55:03] 2025-11-24 11:16:14,271 | INFO     | architecture information:
[2025-11-24 07:55:03] 2025-11-24 11:16:14,289 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:55:03] 2025-11-24 11:16:14,437 | INFO     | cat /etc/os-release:
[2025-11-24 07:55:03] NAME="CentOS Linux"
[2025-11-24 07:55:03] VERSION="7 (Core)"
[2025-11-24 07:55:03] ID="centos"
[2025-11-24 07:55:03] ID_LIKE="rhel fedora"
[2025-11-24 07:55:03] VERSION_ID="7"
[2025-11-24 07:55:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:55:03] ANSI_COLOR="0;31"
[2025-11-24 07:55:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:55:03] HOME_URL="https://www.centos.org/"
[2025-11-24 07:55:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:55:03] 
[2025-11-24 07:55:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:55:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:55:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:55:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:55:03] 
[2025-11-24 07:55:03] 2025-11-24 11:16:14,437 | INFO     | ***************************************
[2025-11-24 07:55:03] 2025-11-24 11:16:14,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-24 07:55:03] 2025-11-24 11:16:15,179 | INFO     | sufficient remaining disk space (122478919680 B)
[2025-11-24 07:55:03] 2025-11-24 11:16:15,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:55:03] 2025-11-24 11:16:15,179 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:55:03] 2025-11-24 11:16:15,180 | INFO     | update_server=False
[2025-11-24 07:55:03] 2025-11-24 11:16:15,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:55:03] 2025-11-24 11:16:15,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:55:03] 2025-11-24 11:16:15,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:55:03] 2025-11-24 11:16:15,186 | INFO     | aborting loop
[2025-11-24 07:55:03] 2025-11-24 11:16:15,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:55:03] 2025-11-24 11:16:15,778 | INFO     | all data control threads have been joined
[2025-11-24 07:55:03] 2025-11-24 11:16:16,186 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,192 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,200 | INFO     | all job control threads have been joined
[2025-11-24 07:55:03] 2025-11-24 11:16:16,291 | INFO     | all payload control threads have been joined
[2025-11-24 07:55:03] 2025-11-24 11:16:16,590 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,671 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,684 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,684 | INFO     | [job] validate thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,691 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:16,784 | INFO     | [data] control thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,191 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,207 | INFO     | [job] control thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,290 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,297 | INFO     | [payload] control thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,351 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:17,684 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:18,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:55:03] 2025-11-24 11:16:22,039 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:55:03] 2025-11-24 11:16:27,552 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:55:03] 2025-11-24 11:16:29,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466752743232)>', '<ExcThread(monitor, started 140466393687808)>']
[2025-11-24 07:55:03] 2025-11-24 11:16:34,267 | INFO     | all workflow threads have been joined
[2025-11-24 07:55:03] 2025-11-24 11:16:34,267 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:55:03] 2025-11-24 11:16:34,267 | INFO     | traces error code: 0
[2025-11-24 07:55:03] 2025-11-24 11:16:34,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:55:03] 2025-11-24 11:16:44,625 | INFO     | PID=3719427 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 07:55:03] 2025-11-24 11:16:44,625 | INFO     | .. there are 18 such processes running
[2025-11-24 07:55:03] 2025-11-24 11:16:44,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:55:03] 2025-11-24 11:16:44,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:55:03] 2025-11-24 11:16:44,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:55:03] 2025-11-24 11:16:44,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:55:03] 2025-11-24 11:16:44,626 | INFO     | [monitor] control thread has ended
[2025-11-24 07:55:03] 2025-11-24 11:16:45,870 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:55:03] 2025-11-24 11:16:45,890 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:55:03] 2025-11-24 11:16:45,910 [wrapper] pilotpid: 3719427
[2025-11-24 07:55:03] 2025-11-24 11:16:45,934 [wrapper] Pilot exit status: 0
[2025-11-24 07:55:03] 2025-11-24 11:16:46,121 [wrapper] pandaids: 6895337168
[2025-11-24 07:55:03] 2025-11-24 11:16:46,465 [wrapper] cleanup supervisor_pilot 2902745 3719428
[2025-11-24 07:55:03] 2025-11-24 11:16:46,516 [wrapper] Test setup, not cleaning
[2025-11-24 07:55:03] 2025-11-24 11:16:46,557 [wrapper] apfmon messages muted
[2025-11-24 07:55:03] 2025-11-24 11:16:46,600 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:55:03] 2025-11-24 11:16:46,633 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:55:03]  *** Error codes and diagnostics ***
[2025-11-24 07:55:03]     "exeErrorCode": 0,
[2025-11-24 07:55:03]     "exeErrorDiag": "",
[2025-11-24 07:55:03]     "pilotErrorCode": 0,
[2025-11-24 07:55:03]     "pilotErrorDiag": "",
[2025-11-24 07:55:03]  *** Listing of results directory ***
[2025-11-24 07:55:03] total 1327632
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:46 pilot3.tar.gz
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:51 queuedata.json
[2025-11-24 07:55:03] -rwx------. 1 boincer umatlas     36292 Nov 22 00:54 runpilot2-wrapper.sh
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:55:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:02 run_atlas
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:02 job.xml
[2025-11-24 07:55:03] -rw-r--r--. 2 boincer umatlas 407829653 Nov 23 00:02 EVNT.47483658._001072.pool.root.1
[2025-11-24 07:55:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:02 start_atlas.sh
[2025-11-24 07:55:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:02 shared
[2025-11-24 07:55:03] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 00:02 input.tar.gz
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:02 boinc_lockfile
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:02 pandaJob.out
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas        57 Nov 23 00:02 setup.sh.local
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas    989784 Nov 23 00:03 agis_schedconf.cvmfs.json
[2025-11-24 07:55:03] drwx------. 5 boincer umatlas      4096 Nov 23 00:03 pilot3
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas       533 Nov 24 05:35 boinc_task_state.xml
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas 914942923 Nov 24 06:13 HITS.47556149._000584.pool.root.1
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas      1060 Nov 24 06:15 memory_monitor_summary.json
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas   1526164 Nov 24 06:15 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas   2808970 Nov 24 06:15 log.47556149._000584.job.log.tgz.1
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas        95 Nov 24 06:16 pilot_heartbeat.json
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas      7965 Nov 24 06:16 heartbeat.json
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas       823 Nov 24 06:16 pilotlog.txt
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas  13591789 Nov 24 06:16 log.47556149._000584.job.log.1
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas       353 Nov 24 06:16 output.list
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas       620 Nov 24 06:16 runtime_log
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas  16424960 Nov 24 06:16 result.tar.gz
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas      9354 Nov 24 06:16 runtime_log.err
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas       664 Nov 24 06:16 LLvKDmWkvg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb0JKDmv5l6Jo.diag
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas        29 Nov 24 07:54 wrapper_checkpoint.txt
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas      6881 Nov 24 07:55 init_data.xml
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 07:55 boinc_mmap_file
[2025-11-24 07:55:03] -rw-r--r--. 1 boincer umatlas     21824 Nov 24 07:55 stderr.txt
[2025-11-24 07:55:03] HITS file was successfully produced:
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas 914942923 Nov 24 06:13 shared/HITS.pool.root.1
[2025-11-24 07:55:03]  *** Contents of shared directory: ***
[2025-11-24 07:55:03] total 1308416
[2025-11-24 07:55:03] -rw-r--r--. 2 boincer umatlas 407829653 Nov 23 00:02 ATLAS.root_0
[2025-11-24 07:55:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:02 start_atlas.sh
[2025-11-24 07:55:03] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 00:02 input.tar.gz
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas 914942923 Nov 24 06:13 HITS.pool.root.1
[2025-11-24 07:55:03] -rw-------. 1 boincer umatlas  16424960 Nov 24 06:16 result.tar.gz
07:55:05 (3705665): run_atlas exited; CPU time 288838.660181
07:55:05 (3705665): called boinc_finish(0)

</stderr_txt>
]]>

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