Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:44:04 (2668549): wrapper (7.7.26015): starting
22:44:04 (2668549): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 22:44:04] Arguments: --nthreads 9
[2025-11-23 22:44:04] Threads: 9
[2025-11-23 22:44:04] Checking for CVMFS
[2025-11-23 22:44:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 22:44:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 22:44:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 22:44:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 22:44:05] 2.13.3.0 9158 26601 316240 153231 0 211 21979348 32935936 25876 16776704 0 159230687 99.797 86159299 33899 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 22:44:05] CVMFS is ok
[2025-11-23 22:44:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 22:44:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 22:44:05] Further information can be found at the LHC@home message board.
[2025-11-23 22:44:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 22:44:05] Checking for apptainer binary...
[2025-11-23 22:44:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 22:44:05] Running /usr/bin/apptainer --version
[2025-11-23 22:44:05] apptainer version 1.4.4-1.el9
[2025-11-23 22:44:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 22:44:05] c-8-16.aglt2.org
[2025-11-23 22:44:05] apptainer works
[2025-11-23 22:44:05] Set ATHENA_PROC_NUMBER=9
[2025-11-23 22:44:05] Set ATHENA_CORE_NUMBER=9
[2025-11-23 22:44:05] Starting ATLAS job with PandaID=6895346094
[2025-11-23 22:44:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:27:42 (3178441): wrapper (7.7.26015): starting
01:27:42 (3178441): wrapper: running run_atlas (--nthreads 11)
[2025-11-24 01:27:42] Arguments: --nthreads 11
[2025-11-24 01:27:42] Threads: 11
[2025-11-24 01:27:42] This job has been restarted, cleaning up previous attempt
[2025-11-24 01:27:42] Checking for CVMFS
[2025-11-24 01:27:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:27:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:27:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:27:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:27:43] 2.13.3.0 9158 26764 308848 153236 0 72 25728780 32935937 24043 16776704 0 159866163 99.794 87234786 33861 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 01:27:43] CVMFS is ok
[2025-11-24 01:27:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 01:27:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 01:27:43] Further information can be found at the LHC@home message board.
[2025-11-24 01:27:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:27:43] Checking for apptainer binary...
[2025-11-24 01:27:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:27:43] Running /usr/bin/apptainer --version
[2025-11-24 01:27:43] apptainer version 1.4.4-1.el9
[2025-11-24 01:27:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:27:43] c-8-16.aglt2.org
[2025-11-24 01:27:43] apptainer works
[2025-11-24 01:27:43] Set ATHENA_PROC_NUMBER=11
[2025-11-24 01:27:43] Set ATHENA_CORE_NUMBER=11
[2025-11-24 01:27:43] Starting ATLAS job with PandaID=6895346094
[2025-11-24 01:27:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:00:07 (3178441): BOINC client no longer exists - exiting
13:00:07 (3178441): timer handler: client dead, exiting
13:12:25 (998748): wrapper (7.7.26015): starting
13:12:25 (998748): wrapper: running run_atlas (--nthreads 10)
[2025-11-24 13:12:25] Arguments: --nthreads 10
[2025-11-24 13:12:25] Threads: 10
[2025-11-24 13:12:25] This job has been restarted, cleaning up previous attempt
[2025-11-24 13:12:25] Checking for CVMFS
[2025-11-24 13:12:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:12:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:12:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:12:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:12:26] 2.13.3.0 9158 27469 321428 153254 1 442 18088534 32935936 23670 16776704 0 162191086 99.791 89471353 33947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 13:12:26] CVMFS is ok
[2025-11-24 13:12:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:12:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:12:26] Further information can be found at the LHC@home message board.
[2025-11-24 13:12:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:12:26] Checking for apptainer binary...
[2025-11-24 13:12:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:12:26] Running /usr/bin/apptainer --version
[2025-11-24 13:12:26] apptainer version 1.4.4-1.el9
[2025-11-24 13:12:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:12:26] c-8-16.aglt2.org
[2025-11-24 13:12:26] apptainer works
[2025-11-24 13:12:26] Set ATHENA_PROC_NUMBER=10
[2025-11-24 13:12:26] Set ATHENA_CORE_NUMBER=10
[2025-11-24 13:12:26] Starting ATLAS job with PandaID=6895346094
[2025-11-24 13:12:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:04:51]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:04:51] 2025-11-25 05:03:50,504 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:04:51] 2025-11-25 05:03:50,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:04:51] 2025-11-25 05:03:50,516 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:04:51] 2025-11-25 05:03:50,517 | INFO     | sum of square deviations: 81287021419.93616
[2025-11-25 00:04:51] 2025-11-25 05:03:50,527 | INFO     | sum of deviations: 948025804409.674
[2025-11-25 00:04:51] 2025-11-25 05:03:50,527 | INFO     | mean x: 1764027471.5796876
[2025-11-25 00:04:51] 2025-11-25 05:03:50,527 | INFO     | mean y: 3217357.4671875
[2025-11-25 00:04:51] 2025-11-25 05:03:50,527 | INFO     | intersect: -20570098450.300175
[2025-11-25 00:04:51] 2025-11-25 05:03:50,528 | INFO     | chi2: 6.758041753223672
[2025-11-25 00:04:51] 2025-11-25 05:03:50,529 | INFO     | sum of square deviations: 79396926959.0615
[2025-11-25 00:04:51] 2025-11-25 05:03:50,539 | INFO     | sum of deviations: 1179580440135.763
[2025-11-25 00:04:51] 2025-11-25 05:03:50,540 | INFO     | mean x: 1764027319.088189
[2025-11-25 00:04:51] 2025-11-25 05:03:50,540 | INFO     | mean y: 3236040.91496063
[2025-11-25 00:04:51] 2025-11-25 05:03:50,540 | INFO     | intersect: -26204480065.458538
[2025-11-25 00:04:51] 2025-11-25 05:03:50,541 | INFO     | chi2: 3.755633110893075
[2025-11-25 00:04:51] 2025-11-25 05:03:50,541 | INFO     | current chi2=3.755633110893075 (change=44.42719876506253 %)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,542 | INFO     | sum of square deviations: 77536367935.59367
[2025-11-25 00:04:51] 2025-11-25 05:03:50,551 | INFO     | sum of deviations: 1320033964342.1367
[2025-11-25 00:04:51] 2025-11-25 05:03:50,551 | INFO     | mean x: 1764027166.5968254
[2025-11-25 00:04:51] 2025-11-25 05:03:50,552 | INFO     | mean y: 3247528.268253968
[2025-11-25 00:04:51] 2025-11-25 05:03:50,552 | INFO     | intersect: -30028798541.57458
[2025-11-25 00:04:51] 2025-11-25 05:03:50,553 | INFO     | chi2: 2.2695146584816603
[2025-11-25 00:04:51] 2025-11-25 05:03:50,553 | INFO     | current chi2=2.2695146584816603 (change=39.57038423431147 %)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,553 | INFO     | sum of square deviations: 75705035295.44646
[2025-11-25 00:04:51] 2025-11-25 05:03:50,563 | INFO     | sum of deviations: 1337234958288.626
[2025-11-25 00:04:51] 2025-11-25 05:03:50,563 | INFO     | mean x: 1764027014.1024
[2025-11-25 00:04:51] 2025-11-25 05:03:50,563 | INFO     | mean y: 3248945.8496
[2025-11-25 00:04:51] 2025-11-25 05:03:50,563 | INFO     | intersect: -31156086512.053787
[2025-11-25 00:04:51] 2025-11-25 05:03:50,564 | INFO     | chi2: 2.0963579884507846
[2025-11-25 00:04:51] 2025-11-25 05:03:50,564 | INFO     | current chi2=2.0963579884507846 (change=7.629678415327803 %)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,565 | INFO     | right removable region: 624
[2025-11-25 00:04:51] 2025-11-25 05:03:50,565 | INFO     | sum of square deviations: 79396583165.40775
[2025-11-25 00:04:51] 2025-11-25 05:03:50,575 | INFO     | sum of deviations: 770984939309.7905
[2025-11-25 00:04:51] 2025-11-25 05:03:50,575 | INFO     | mean x: 1764027624.0850394
[2025-11-25 00:04:51] 2025-11-25 05:03:50,575 | INFO     | mean y: 3231606.577952756
[2025-11-25 00:04:51] 2025-11-25 05:03:50,575 | INFO     | intersect: -17126456806.620066
[2025-11-25 00:04:51] 2025-11-25 05:03:50,576 | INFO     | chi2: 4.858883382310193
[2025-11-25 00:04:51] 2025-11-25 05:03:50,576 | INFO     | current chi2=4.858883382310193 (change=28.102199427926834 %)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,577 | INFO     | sum of square deviations: 77535796922.87132
[2025-11-25 00:04:51] 2025-11-25 05:03:50,587 | INFO     | sum of deviations: 709679327583.5574
[2025-11-25 00:04:51] 2025-11-25 05:03:50,587 | INFO     | mean x: 1764027776.5857143
[2025-11-25 00:04:51] 2025-11-25 05:03:50,587 | INFO     | mean y: 3236628.6841269843
[2025-11-25 00:04:51] 2025-11-25 05:03:50,587 | INFO     | intersect: -16142777161.19654
[2025-11-25 00:04:51] 2025-11-25 05:03:50,588 | INFO     | chi2: 4.767471955091101
[2025-11-25 00:04:51] 2025-11-25 05:03:50,588 | INFO     | current chi2=4.767471955091101 (change=1.8813258114383835 %)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,588 | INFO     | left removable region: 20
[2025-11-25 00:04:51] 2025-11-25 05:03:50,589 | INFO     | sum of square deviations: 68327384861.787926
[2025-11-25 00:04:51] 2025-11-25 05:03:50,598 | INFO     | sum of deviations: 1010581999084.0001
[2025-11-25 00:04:51] 2025-11-25 05:03:50,598 | INFO     | mean x: 1764027593.6092715
[2025-11-25 00:04:51] 2025-11-25 05:03:50,598 | INFO     | mean y: 3276157.75
[2025-11-25 00:04:51] 2025-11-25 05:03:50,599 | INFO     | intersect: -26087207703.07704
[2025-11-25 00:04:51] 2025-11-25 05:03:50,599 | INFO     | chi2: 0.047433824867655565
[2025-11-25 00:04:51] 2025-11-25 05:03:50,600 | INFO     | current memory leak: 14.79 B/s (using 604 data points, chi2=0.05)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,600 | INFO     | could have reported an average CPU frequency of 2604 MHz (25 samples)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | ..............................
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . Timing measurements:
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . get job = 0 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . initial setup = 2 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . payload setup = 4 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . stage-in = 0 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . payload execution = 39033 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . stage-out = 3 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | . log creation = 0 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,601 | INFO     | ..............................
[2025-11-25 00:04:51] 2025-11-25 05:03:50,742 | INFO     | 
[2025-11-25 00:04:51] 2025-11-25 05:03:50,742 | INFO     | job summary report
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | --------------------------------------------------
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | PanDA job id: 6895346094
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | task id: 47556137
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | errors: (none)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | pilot state: finished 
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | transexitcode: 0
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | exeerrorcode: 0
[2025-11-25 00:04:51] 2025-11-25 05:03:50,743 | INFO     | exeerrordiag: 
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | exitcode: 0
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | exitmsg: OK
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | cpuconsumptiontime: 291157 s
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | nevents: 1000
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | neventsw: 0
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | pid: 1034242
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | pgrp: 1034242
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | corecount: 10
[2025-11-25 00:04:51] 2025-11-25 05:03:50,744 | INFO     | event service: False
[2025-11-25 00:04:51] 2025-11-25 05:03:50,745 | INFO     | sizes: {0: 2284258, 4: 2284520, 11: 2284548, 39042: 2328466, 39046: 2337516, 39058: 2337770}
[2025-11-25 00:04:51] 2025-11-25 05:03:50,745 | INFO     | --------------------------------------------------
[2025-11-25 00:04:51] 2025-11-25 05:03:50,745 | INFO     | 
[2025-11-25 00:04:51] 2025-11-25 05:03:50,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 00:04:51] 2025-11-25 05:03:50,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | job 6895346094 has completed (purged errors)
[2025-11-25 00:04:51] 2025-11-25 05:03:50,789 | INFO     | overall cleanup function is called
[2025-11-25 00:04:51] 2025-11-25 05:03:51,807 | INFO     | --- collectZombieJob: --- 10, [1034242]
[2025-11-25 00:04:51] 2025-11-25 05:03:51,808 | INFO     | zombie collector waiting for pid 1034242
[2025-11-25 00:04:51] 2025-11-25 05:03:51,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:04:51] 2025-11-25 05:03:51,808 | INFO     | collected zombie processes
[2025-11-25 00:04:51] 2025-11-25 05:03:51,808 | INFO     | will attempt to kill all subprocesses of pid=1034242
[2025-11-25 00:04:51] 2025-11-25 05:03:52,375 | INFO     | process IDs to be killed: [1034242] (in reverse order)
[2025-11-25 00:04:51] 2025-11-25 05:03:52,610 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:04:51] 2025-11-25 05:03:52,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:04:51] 2025-11-25 05:03:52,640 | INFO     | did not find any defunct processes belonging to 1034242
[2025-11-25 00:04:51] 2025-11-25 05:03:52,655 | INFO     | did not find any defunct processes belonging to 1034242
[2025-11-25 00:04:51] 2025-11-25 05:03:52,677 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:04:51] 2025-11-25 05:03:52,677 | INFO     | ready for new job
[2025-11-25 00:04:51] 2025-11-25 05:03:52,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:04:51] 2025-11-25 05:03:52,688 | INFO     | ***************************************
[2025-11-25 00:04:51] 2025-11-25 05:03:52,688 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:04:51] 2025-11-25 05:03:52,688 | INFO     | ***************************************
[2025-11-25 00:04:51] 2025-11-25 05:03:52,688 | INFO     | 
[2025-11-25 00:04:51] 2025-11-25 05:03:52,690 | INFO     | architecture information:
[2025-11-25 00:04:51] 2025-11-25 05:03:52,721 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:04:51] 2025-11-25 05:03:52,795 | INFO     | cat /etc/os-release:
[2025-11-25 00:04:51] NAME="CentOS Linux"
[2025-11-25 00:04:51] VERSION="7 (Core)"
[2025-11-25 00:04:51] ID="centos"
[2025-11-25 00:04:51] ID_LIKE="rhel fedora"
[2025-11-25 00:04:51] VERSION_ID="7"
[2025-11-25 00:04:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:04:51] ANSI_COLOR="0;31"
[2025-11-25 00:04:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:04:51] HOME_URL="https://www.centos.org/"
[2025-11-25 00:04:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:04:51] 
[2025-11-25 00:04:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:04:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:04:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:04:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:04:51] 
[2025-11-25 00:04:51] 2025-11-25 05:03:52,795 | INFO     | ***************************************
[2025-11-25 00:04:51] 2025-11-25 05:03:53,299 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 00:04:51] 2025-11-25 05:03:53,323 | INFO     | sufficient remaining disk space (71378665472 B)
[2025-11-25 00:04:51] 2025-11-25 05:03:53,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:04:51] 2025-11-25 05:03:53,324 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:04:51] 2025-11-25 05:03:53,324 | INFO     | update_server=False
[2025-11-25 00:04:51] 2025-11-25 05:03:53,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:04:51] 2025-11-25 05:03:53,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:04:51] 2025-11-25 05:03:53,468 | INFO     | all job control threads have been joined
[2025-11-25 00:04:51] 2025-11-25 05:03:53,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:04:51] 2025-11-25 05:03:53,558 | INFO     | aborting loop
[2025-11-25 00:04:51] 2025-11-25 05:03:53,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:04:51] 2025-11-25 05:03:54,108 | INFO     | all payload control threads have been joined
[2025-11-25 00:04:51] 2025-11-25 05:03:54,286 | INFO     | all data control threads have been joined
[2025-11-25 00:04:51] 2025-11-25 05:03:54,333 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:54,375 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:54,474 | INFO     | [job] control thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:54,476 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:54,566 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:54,953 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,076 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,117 | INFO     | [payload] control thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,265 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,293 | INFO     | [data] control thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,539 | INFO     | [job] validate thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,625 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,750 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:55,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:04:51] 2025-11-25 05:03:56,766 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:03:57,348 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:04:51] 2025-11-25 05:04:22,889 | INFO     | PID=1010563 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 00:04:51] 2025-11-25 05:04:22,889 | INFO     | .. there are 43 such processes running
[2025-11-25 00:04:51] 2025-11-25 05:04:22,890 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:04:51] 2025-11-25 05:04:22,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:04:51] 2025-11-25 05:04:22,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:04:51] 2025-11-25 05:04:44,856 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:04:51] 2025-11-25 05:04:45,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850958985024)>', '<ExcThread(monitor, started 139850242062080)>']
[2025-11-25 00:04:51] 2025-11-25 05:04:46,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:04:51] 2025-11-25 05:04:46,048 | INFO     | [monitor] control thread has ended
[2025-11-25 00:04:51] 2025-11-25 05:04:50,653 | INFO     | all workflow threads have been joined
[2025-11-25 00:04:51] 2025-11-25 05:04:50,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:04:51] 2025-11-25 05:04:50,664 | INFO     | traces error code: 0
[2025-11-25 00:04:51] 2025-11-25 05:04:50,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:04:51] 2025-11-25 05:04:50,848 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:04:51] 2025-11-25 05:04:50,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:04:51] 2025-11-25 05:04:50,865 [wrapper] pilotpid: 1010563
[2025-11-25 00:04:51] 2025-11-25 05:04:50,888 [wrapper] Pilot exit status: 0
[2025-11-25 00:04:51] 2025-11-25 05:04:51,008 [wrapper] pandaids: 6895346094 6895346094 6895346094
[2025-11-25 00:04:51] 2025-11-25 05:04:51,162 [wrapper] cleanup supervisor_pilot 2828984 1010564
[2025-11-25 00:04:51] 2025-11-25 05:04:51,169 [wrapper] Test setup, not cleaning
[2025-11-25 00:04:51] 2025-11-25 05:04:51,195 [wrapper] apfmon messages muted
[2025-11-25 00:04:51] 2025-11-25 05:04:51,247 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:04:51] 2025-11-25 05:04:51,273 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:04:51]  *** Error codes and diagnostics ***
[2025-11-25 00:04:51]     "exeErrorCode": 0,
[2025-11-25 00:04:51]     "exeErrorDiag": "",
[2025-11-25 00:04:51]     "pilotErrorCode": 0,
[2025-11-25 00:04:51]     "pilotErrorDiag": "",
[2025-11-25 00:04:51]  *** Listing of results directory ***
[2025-11-25 00:04:51] total 1717312
[2025-11-25 00:04:51] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 12:49 queuedata.json
[2025-11-25 00:04:51] -rwx------. 1 boincer umatlas     36292 Nov 22 12:51 runpilot2-wrapper.sh
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas       100 Nov 23 22:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:04:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 22:44 run_atlas
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas       105 Nov 23 22:44 job.xml
[2025-11-25 00:04:51] -rw-r--r--. 3 boincer umatlas 410118000 Nov 23 22:44 EVNT.47483658._000455.pool.root.1
[2025-11-25 00:04:51] -rw-r--r--. 3 boincer umatlas 410118000 Nov 23 22:44 ATLAS.root_0
[2025-11-25 00:04:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 22:44 start_atlas.sh
[2025-11-25 00:04:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 22:44 shared
[2025-11-25 00:04:51] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 22:44 input.tar.gz
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas         0 Nov 23 22:44 boinc_lockfile
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 13:12 pandaJob.out
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas        57 Nov 24 13:12 setup.sh.local
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas    991801 Nov 24 13:12 agis_schedconf.cvmfs.json
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas       533 Nov 24 23:49 boinc_task_state.xml
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas      6661 Nov 25 00:00 init_data.xml
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas 919596623 Nov 25 00:02 HITS.47556137._004508.pool.root.1
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas      1068 Nov 25 00:03 memory_monitor_summary.json
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas   1516227 Nov 25 00:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas   2116684 Nov 25 00:03 log.47556137._004508.job.log.tgz.1
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas      8635 Nov 25 00:03 heartbeat.json
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas        96 Nov 25 00:04 pilot_heartbeat.json
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 00:04 boinc_mmap_file
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas        29 Nov 25 00:04 wrapper_checkpoint.txt
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas      4824 Nov 25 00:04 pilotlog.txt
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas   5262885 Nov 25 00:04 log.47556137._004508.job.log.1
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas       353 Nov 25 00:04 output.list
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas       620 Nov 25 00:04 runtime_log
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas   7403520 Nov 25 00:04 result.tar.gz
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas      9420 Nov 25 00:04 runtime_log.err
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas       912 Nov 25 00:04 9AYMDmYw6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIKKKDmhBYkun.diag
[2025-11-25 00:04:51] -rw-r--r--. 1 boincer umatlas     25529 Nov 25 00:04 stderr.txt
[2025-11-25 00:04:51] HITS file was successfully produced:
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas 919596623 Nov 25 00:02 shared/HITS.pool.root.1
[2025-11-25 00:04:51]  *** Contents of shared directory: ***
[2025-11-25 00:04:51] total 1306388
[2025-11-25 00:04:51] -rw-r--r--. 3 boincer umatlas 410118000 Nov 23 22:44 ATLAS.root_0
[2025-11-25 00:04:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 22:44 start_atlas.sh
[2025-11-25 00:04:51] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 22:44 input.tar.gz
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas 919596623 Nov 25 00:02 HITS.pool.root.1
[2025-11-25 00:04:51] -rw-------. 1 boincer umatlas   7403520 Nov 25 00:04 result.tar.gz
00:04:53 (998748): run_atlas exited; CPU time 292324.376766
00:04:53 (998748): called boinc_finish(0)

</stderr_txt>
]]>

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