Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:16 (1153874): wrapper (7.7.26015): starting
00:02:16 (1153874): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:02:16] Arguments: --nthreads 9
[2025-11-24 00:02:16] Threads: 9
[2025-11-24 00:02:16] Checking for CVMFS
[2025-11-24 00:02:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:18] 2.13.3.0 9358 25029 337484 153233 0 375 17275890 32935936 22166 16776704 0 135391170 99.792 71687749 33431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:02:18] CVMFS is ok
[2025-11-24 00:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:18] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:18] Checking for apptainer binary...
[2025-11-24 00:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:18] Running /usr/bin/apptainer --version
[2025-11-24 00:02:18] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:19] c-6-6.aglt2.org
[2025-11-24 00:02:19] apptainer works
[2025-11-24 00:02:19] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:02:19] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:02:19] Starting ATLAS job with PandaID=6895336860
[2025-11-24 00:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:21:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:21:49] 2025-11-25 04:21:15,807 | INFO     | monitor loop #5012: job 0:6895336860 is in state 'finished'
[2025-11-24 23:21:49] 2025-11-25 04:21:15,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:21:49] 2025-11-25 04:21:15,955 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 23:21:49] 2025-11-25 04:21:15,962 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1801250000003
[2025-11-24 23:21:49] 2025-11-25 04:21:15,969 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895336860/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:21:49] 2025-11-25 04:21:15,970 | INFO     | extracted standard info from prmon json
[2025-11-24 23:21:49] 2025-11-25 04:21:15,970 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:21:49] 2025-11-25 04:21:15,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:21:49] 2025-11-25 04:21:15,995 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:21:49] 2025-11-25 04:21:15,997 | INFO     | sum of square deviations: 802546425488.2256
[2025-11-24 23:21:49] 2025-11-25 04:21:16,047 | INFO     | sum of deviations: 5558663071882.603
[2025-11-24 23:21:49] 2025-11-25 04:21:16,047 | INFO     | mean x: 1764002557.4726875
[2025-11-24 23:21:49] 2025-11-25 04:21:16,048 | INFO     | mean y: 3079742.482884195
[2025-11-24 23:21:49] 2025-11-25 04:21:16,048 | INFO     | intersect: -12214899882.76405
[2025-11-24 23:21:49] 2025-11-25 04:21:16,050 | INFO     | chi2: 7.560362111485553
[2025-11-24 23:21:49] 2025-11-25 04:21:16,052 | INFO     | sum of square deviations: 793810729547.3429
[2025-11-24 23:21:49] 2025-11-25 04:21:16,100 | INFO     | sum of deviations: 5980410040104.206
[2025-11-24 23:21:49] 2025-11-25 04:21:16,101 | INFO     | mean x: 1764002404.9780703
[2025-11-24 23:21:49] 2025-11-25 04:21:16,101 | INFO     | mean y: 3087102.9400584796
[2025-11-24 23:21:49] 2025-11-25 04:21:16,101 | INFO     | intersect: -13286551473.140245
[2025-11-24 23:21:49] 2025-11-25 04:21:16,103 | INFO     | chi2: 5.148082584531999
[2025-11-24 23:21:49] 2025-11-25 04:21:16,103 | INFO     | current chi2=5.148082584531999 (change=31.906931062056753 %)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,105 | INFO     | sum of square deviations: 785138662706.3787
[2025-11-24 23:21:49] 2025-11-25 04:21:16,152 | INFO     | sum of deviations: 6017733347843.223
[2025-11-24 23:21:49] 2025-11-25 04:21:16,152 | INFO     | mean x: 1764002252.4834924
[2025-11-24 23:21:49] 2025-11-25 04:21:16,152 | INFO     | mean y: 3087756.5656639766
[2025-11-24 23:21:49] 2025-11-25 04:21:16,153 | INFO     | intersect: -13517193035.427782
[2025-11-24 23:21:49] 2025-11-25 04:21:16,154 | INFO     | chi2: 4.987387062341399
[2025-11-24 23:21:49] 2025-11-25 04:21:16,155 | INFO     | current chi2=4.987387062341399 (change=3.121463565355936 %)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,155 | INFO     | right removable region: 1362
[2025-11-24 23:21:49] 2025-11-25 04:21:16,156 | INFO     | sum of square deviations: 793809496127.342
[2025-11-24 23:21:49] 2025-11-25 04:21:16,202 | INFO     | sum of deviations: 5007368236382.278
[2025-11-24 23:21:49] 2025-11-25 04:21:16,202 | INFO     | mean x: 1764002709.9780703
[2025-11-24 23:21:49] 2025-11-25 04:21:16,202 | INFO     | mean y: 3089363.7426900584
[2025-11-24 23:21:49] 2025-11-25 04:21:16,203 | INFO     | intersect: -11124279585.518995
[2025-11-24 23:21:49] 2025-11-25 04:21:16,204 | INFO     | chi2: 3.963003618532083
[2025-11-24 23:21:49] 2025-11-25 04:21:16,205 | INFO     | current chi2=3.963003618532083 (change=47.581827958854426 %)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,206 | INFO     | sum of square deviations: 785136695204.154
[2025-11-24 23:21:49] 2025-11-25 04:21:16,252 | INFO     | sum of deviations: 4740203245465.078
[2025-11-24 23:21:49] 2025-11-25 04:21:16,252 | INFO     | mean x: 1764002862.4790902
[2025-11-24 23:21:49] 2025-11-25 04:21:16,252 | INFO     | mean y: 3094057.6874541454
[2025-11-24 23:21:49] 2025-11-25 04:21:16,252 | INFO     | intersect: -10646939426.684109
[2025-11-24 23:21:49] 2025-11-25 04:21:16,254 | INFO     | chi2: 3.1410389090168924
[2025-11-24 23:21:49] 2025-11-25 04:21:16,254 | INFO     | current chi2=3.1410389090168924 (change=20.740952788220024 %)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,255 | INFO     | left removable region: 20
[2025-11-24 23:21:49] 2025-11-25 04:21:16,256 | INFO     | sum of square deviations: 749402364135.893
[2025-11-24 23:21:49] 2025-11-25 04:21:16,300 | INFO     | sum of deviations: 4929310080058.136
[2025-11-24 23:21:49] 2025-11-25 04:21:16,300 | INFO     | mean x: 1764002831.991058
[2025-11-24 23:21:49] 2025-11-25 04:21:16,300 | INFO     | mean y: 3106872.511922504
[2025-11-24 23:21:49] 2025-11-25 04:21:16,300 | INFO     | intersect: -11599894875.435398
[2025-11-24 23:21:49] 2025-11-25 04:21:16,302 | INFO     | chi2: 0.37913746754272365
[2025-11-24 23:21:49] 2025-11-25 04:21:16,303 | INFO     | current memory leak: 6.58 B/s (using 1342 data points, chi2=0.38)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,304 | INFO     | could have reported an average CPU frequency of 2600 MHz (49 samples)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,304 | INFO     | ..............................
[2025-11-24 23:21:49] 2025-11-25 04:21:16,304 | INFO     | . Timing measurements:
[2025-11-24 23:21:49] 2025-11-25 04:21:16,304 | INFO     | . get job = 0 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,304 | INFO     | . initial setup = 5 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,305 | INFO     | . payload setup = 35 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,305 | INFO     | . stage-in = 0 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,305 | INFO     | . payload execution = 83774 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,305 | INFO     | . stage-out = 4 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,305 | INFO     | . log creation = 1 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,305 | INFO     | ..............................
[2025-11-24 23:21:49] 2025-11-25 04:21:16,437 | INFO     | 
[2025-11-24 23:21:49] 2025-11-25 04:21:16,437 | INFO     | job summary report
[2025-11-24 23:21:49] 2025-11-25 04:21:16,437 | INFO     | --------------------------------------------------
[2025-11-24 23:21:49] 2025-11-25 04:21:16,438 | INFO     | PanDA job id: 6895336860
[2025-11-24 23:21:49] 2025-11-25 04:21:16,438 | INFO     | task id: 47556137
[2025-11-24 23:21:49] 2025-11-25 04:21:16,438 | INFO     | errors: (none)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:21:49] 2025-11-25 04:21:16,438 | INFO     | pilot state: finished 
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | transexitcode: 0
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | exeerrorcode: 0
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | exeerrordiag: 
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | exitcode: 0
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | exitmsg: OK
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | cpuconsumptiontime: 298179 s
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | nevents: 1000
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | neventsw: 0
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | pid: 1166849
[2025-11-24 23:21:49] 2025-11-25 04:21:16,439 | INFO     | pgrp: 1166849
[2025-11-24 23:21:49] 2025-11-25 04:21:16,440 | INFO     | corecount: 9
[2025-11-24 23:21:49] 2025-11-25 04:21:16,440 | INFO     | event service: False
[2025-11-24 23:21:49] 2025-11-25 04:21:16,440 | INFO     | sizes: {0: 2298580, 1: 2298664, 2: 2298863, 13: 2298863, 24: 2298919, 30: 2299209, 35: 2299365, 83813: 2362917, 83814: 2362916, 83820: 2372757, 83821: 2372813, 838
[2025-11-24 23:21:49] 2025-11-25 04:21:16,440 | INFO     | --------------------------------------------------
[2025-11-24 23:21:49] 2025-11-25 04:21:16,440 | INFO     | 
[2025-11-24 23:21:49] 2025-11-25 04:21:16,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 23:21:49] 2025-11-25 04:21:16,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:21:49] 2025-11-25 04:21:16,469 | INFO     | job 6895336860 has completed (purged errors)
[2025-11-24 23:21:49] 2025-11-25 04:21:16,469 | INFO     | overall cleanup function is called
[2025-11-24 23:21:49] 2025-11-25 04:21:17,492 | INFO     | --- collectZombieJob: --- 10, [1166849]
[2025-11-24 23:21:49] 2025-11-25 04:21:17,494 | INFO     | zombie collector waiting for pid 1166849
[2025-11-24 23:21:49] 2025-11-25 04:21:17,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:21:49] 2025-11-25 04:21:17,494 | INFO     | collected zombie processes
[2025-11-24 23:21:49] 2025-11-25 04:21:17,494 | INFO     | will attempt to kill all subprocesses of pid=1166849
[2025-11-24 23:21:49] 2025-11-25 04:21:17,927 | INFO     | process IDs to be killed: [1166849] (in reverse order)
[2025-11-24 23:21:49] 2025-11-25 04:21:18,068 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:21:49] 2025-11-25 04:21:18,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:21:49] 2025-11-25 04:21:18,084 | INFO     | did not find any defunct processes belonging to 1166849
[2025-11-24 23:21:49] 2025-11-25 04:21:18,099 | INFO     | did not find any defunct processes belonging to 1166849
[2025-11-24 23:21:49] 2025-11-25 04:21:18,100 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:21:49] 2025-11-25 04:21:18,101 | INFO     | ready for new job
[2025-11-24 23:21:49] 2025-11-25 04:21:18,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:21:49] 2025-11-25 04:21:18,109 | INFO     | ***************************************
[2025-11-24 23:21:49] 2025-11-25 04:21:18,110 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:21:49] 2025-11-25 04:21:18,110 | INFO     | ***************************************
[2025-11-24 23:21:49] 2025-11-25 04:21:18,110 | INFO     | 
[2025-11-24 23:21:49] 2025-11-25 04:21:18,112 | INFO     | architecture information:
[2025-11-24 23:21:49] 2025-11-25 04:21:18,112 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:21:49] 2025-11-25 04:21:18,130 | INFO     | cat /etc/os-release:
[2025-11-24 23:21:49] NAME="CentOS Linux"
[2025-11-24 23:21:49] VERSION="7 (Core)"
[2025-11-24 23:21:49] ID="centos"
[2025-11-24 23:21:49] ID_LIKE="rhel fedora"
[2025-11-24 23:21:49] VERSION_ID="7"
[2025-11-24 23:21:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:21:49] ANSI_COLOR="0;31"
[2025-11-24 23:21:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:21:49] HOME_URL="https://www.centos.org/"
[2025-11-24 23:21:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:21:49] 
[2025-11-24 23:21:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:21:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:21:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:21:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:21:49] 
[2025-11-24 23:21:49] 2025-11-25 04:21:18,131 | INFO     | ***************************************
[2025-11-24 23:21:49] 2025-11-25 04:21:18,633 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 23:21:49] 2025-11-25 04:21:18,656 | INFO     | sufficient remaining disk space (70693945344 B)
[2025-11-24 23:21:49] 2025-11-25 04:21:18,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:21:49] 2025-11-25 04:21:18,657 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:21:49] 2025-11-25 04:21:18,657 | INFO     | update_server=False
[2025-11-24 23:21:49] 2025-11-25 04:21:18,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:21:49] 2025-11-25 04:21:18,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:21:49] 2025-11-25 04:21:18,692 | INFO     | all job control threads have been joined
[2025-11-24 23:21:49] 2025-11-25 04:21:18,816 | INFO     | all payload control threads have been joined
[2025-11-24 23:21:49] 2025-11-25 04:21:19,168 | INFO     | all data control threads have been joined
[2025-11-24 23:21:49] 2025-11-25 04:21:19,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:21:49] 2025-11-25 04:21:19,316 | INFO     | aborting loop
[2025-11-24 23:21:49] 2025-11-25 04:21:19,662 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:19,675 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:19,697 | INFO     | [job] control thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:19,755 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:19,821 | INFO     | [payload] control thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:19,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:21:49] 2025-11-25 04:21:19,938 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,088 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,173 | INFO     | [data] control thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,211 | INFO     | [job] validate thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,322 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,349 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:20,441 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:21,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:21:49] 2025-11-25 04:21:21,921 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:22,459 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:22,674 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:21:49] 2025-11-25 04:21:39,138 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:21:49] 2025-11-25 04:21:39,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148930041664)>', '<ExcThread(monitor, started 140148582893312)>']
[2025-11-24 23:21:49] 2025-11-25 04:21:44,966 | INFO     | all workflow threads have been joined
[2025-11-24 23:21:49] 2025-11-25 04:21:44,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:21:49] 2025-11-25 04:21:44,966 | INFO     | traces error code: 0
[2025-11-24 23:21:49] 2025-11-25 04:21:44,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:21:49] 2025-11-25 04:21:48,846 | INFO     | PID=1158180 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:21:49] 2025-11-25 04:21:48,848 | INFO     | .. there are 39 such processes running
[2025-11-24 23:21:49] 2025-11-25 04:21:48,848 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:21:49] 2025-11-25 04:21:48,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:21:49] 2025-11-25 04:21:48,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:21:49] 2025-11-25 04:21:48,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:21:49] 2025-11-25 04:21:48,848 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 23:21:49] 2025-11-25 04:21:48,849 | INFO     | [monitor] control thread has ended
[2025-11-24 23:21:49] 2025-11-25 04:21:49,015 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:21:49] 2025-11-25 04:21:49,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:21:49] 2025-11-25 04:21:49,019 [wrapper] pilotpid: 1158180
[2025-11-24 23:21:49] 2025-11-25 04:21:49,022 [wrapper] Pilot exit status: 0
[2025-11-24 23:21:49] 2025-11-25 04:21:49,030 [wrapper] pandaids: 6895336860
[2025-11-24 23:21:49] 2025-11-25 04:21:49,088 [wrapper] cleanup supervisor_pilot 1116583 1158181
[2025-11-24 23:21:49] 2025-11-25 04:21:49,091 [wrapper] Test setup, not cleaning
[2025-11-24 23:21:49] 2025-11-25 04:21:49,093 [wrapper] apfmon messages muted
[2025-11-24 23:21:49] 2025-11-25 04:21:49,096 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:21:49] 2025-11-25 04:21:49,099 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:21:49]  *** Error codes and diagnostics ***
[2025-11-24 23:21:49]     "exeErrorCode": 0,
[2025-11-24 23:21:49]     "exeErrorDiag": "",
[2025-11-24 23:21:49]     "pilotErrorCode": 0,
[2025-11-24 23:21:49]     "pilotErrorDiag": "",
[2025-11-24 23:21:49]  *** Listing of results directory ***
[2025-11-24 23:21:49] total 1309796
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:46 pilot3.tar.gz
[2025-11-24 23:21:49] -rwx------. 1 boincer umatlas     36292 Nov 22 00:49 runpilot2-wrapper.sh
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:49 queuedata.json
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:21:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-24 23:21:49] -rw-r--r--. 2 boincer umatlas 411086665 Nov 24 00:02 EVNT.47483658._000287.pool.root.1
[2025-11-24 23:21:49] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 00:02 input.tar.gz
[2025-11-24 23:21:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 23:21:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 00:02 pandaJob.out
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas        57 Nov 24 00:02 setup.sh.local
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas    989786 Nov 24 00:03 agis_schedconf.cvmfs.json
[2025-11-24 23:21:49] drwx------. 5 boincer umatlas      4096 Nov 24 00:03 pilot3
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas       533 Nov 24 23:12 boinc_task_state.xml
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas      6660 Nov 24 23:19 init_data.xml
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas 899990208 Nov 24 23:20 HITS.47556137._002840.pool.root.1
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas      1058 Nov 24 23:20 memory_monitor_summary.json
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas   1516227 Nov 24 23:21 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas   2536687 Nov 24 23:21 log.47556137._002840.job.log.tgz.1
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas        95 Nov 24 23:21 pilot_heartbeat.json
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas      8614 Nov 24 23:21 heartbeat.json
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas        29 Nov 24 23:21 wrapper_checkpoint.txt
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 23:21 boinc_mmap_file
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas       893 Nov 24 23:21 pilotlog.txt
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas  10583744 Nov 24 23:21 log.47556137._002840.job.log.1
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas       353 Nov 24 23:21 output.list
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas       620 Nov 24 23:21 runtime_log
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas  13137920 Nov 24 23:21 result.tar.gz
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas       657 Nov 24 23:21 XJ0MDmBgvg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2zHKDm98FZnm.diag
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas      9328 Nov 24 23:21 runtime_log.err
[2025-11-24 23:21:49] -rw-r--r--. 1 boincer umatlas     21351 Nov 24 23:21 stderr.txt
[2025-11-24 23:21:49] HITS file was successfully produced:
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas 899990208 Nov 24 23:20 shared/HITS.pool.root.1
[2025-11-24 23:21:49]  *** Contents of shared directory: ***
[2025-11-24 23:21:49] total 1293788
[2025-11-24 23:21:49] -rw-r--r--. 2 boincer umatlas 411086665 Nov 24 00:02 ATLAS.root_0
[2025-11-24 23:21:49] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 00:02 input.tar.gz
[2025-11-24 23:21:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas 899990208 Nov 24 23:20 HITS.pool.root.1
[2025-11-24 23:21:49] -rw-------. 1 boincer umatlas  13137920 Nov 24 23:21 result.tar.gz
23:21:50 (1153874): run_atlas exited; CPU time 301008.169166
23:21:50 (1153874): called boinc_finish(0)

</stderr_txt>
]]>

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