Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:32 (2376476): wrapper (7.7.26015): starting
00:00:32 (2376476): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:00:32] Arguments: --nthreads 9
[2025-11-24 00:00:32] Threads: 9
[2025-11-24 00:00:32] Checking for CVMFS
[2025-11-24 00:00:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:00:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:00:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:00:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:00:36] 2.13.2.0 4359 30404 370944 153233 1 141 34592619 40960001 14661 16776704 0 39525549 99.535 48663374 28273 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:00:36] CVMFS is ok
[2025-11-24 00:00:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:00:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:00:36] Further information can be found at the LHC@home message board.
[2025-11-24 00:00:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:00:36] Checking for apptainer binary...
[2025-11-24 00:00:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:00:36] Running /usr/bin/apptainer --version
[2025-11-24 00:00:37] apptainer version 1.4.4-1.el9
[2025-11-24 00:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:00:39] c-211-14.aglt2.org
[2025-11-24 00:00:39] apptainer works
[2025-11-24 00:00:39] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:00:39] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:00:39] Starting ATLAS job with PandaID=6894052085
[2025-11-24 00:00:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:00:39]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:00:39] 2025-11-25 02:29:25,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:00:39] 2025-11-25 02:29:25,506 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 00:00:39] 2025-11-25 02:29:25,586 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2756.204520833333
[2025-11-25 00:00:39] 2025-11-25 02:29:25,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894052085/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:00:39] 2025-11-25 02:29:25,629 | INFO     | extracted standard info from prmon json
[2025-11-25 00:00:39] 2025-11-25 02:29:25,629 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:00:39] 2025-11-25 02:29:25,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:00:39] 2025-11-25 02:29:25,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 00:00:39] 2025-11-25 02:29:25,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:00:39] 2025-11-25 02:29:25,724 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:00:39] 2025-11-25 02:29:25,726 | INFO     | sum of square deviations: 623212650799.7189
[2025-11-25 00:00:39] 2025-11-25 02:29:25,770 | INFO     | sum of deviations: 1832937422213.6353
[2025-11-25 00:00:39] 2025-11-25 02:29:25,770 | INFO     | mean x: 1763999245.3748019
[2025-11-25 00:00:39] 2025-11-25 02:29:25,770 | INFO     | mean y: 2620340.535657686
[2025-11-25 00:00:39] 2025-11-25 02:29:25,770 | INFO     | intersect: -5185496790.037754
[2025-11-25 00:00:39] 2025-11-25 02:29:25,772 | INFO     | chi2: 8.6609399875328
[2025-11-25 00:00:39] 2025-11-25 02:29:25,774 | INFO     | sum of square deviations: 615834514288.3772
[2025-11-25 00:00:39] 2025-11-25 02:29:25,828 | INFO     | sum of deviations: 1994636340195.6724
[2025-11-25 00:00:39] 2025-11-25 02:29:25,829 | INFO     | mean x: 1763999092.8782816
[2025-11-25 00:00:39] 2025-11-25 02:29:25,829 | INFO     | mean y: 2623674.2004773268
[2025-11-25 00:00:39] 2025-11-25 02:29:25,829 | INFO     | intersect: -5710821436.6066675
[2025-11-25 00:00:39] 2025-11-25 02:29:25,835 | INFO     | chi2: 7.275010394158226
[2025-11-25 00:00:39] 2025-11-25 02:29:25,835 | INFO     | current chi2=7.275010394158226 (change=16.002069006015322 %)
[2025-11-25 00:00:39] 2025-11-25 02:29:25,835 | INFO     | right removable region: 1256
[2025-11-25 00:00:39] 2025-11-25 02:29:25,837 | INFO     | sum of square deviations: 615833917587.1335
[2025-11-25 00:00:39] 2025-11-25 02:29:25,923 | INFO     | sum of deviations: 1404810285166.6812
[2025-11-25 00:00:39] 2025-11-25 02:29:25,924 | INFO     | mean x: 1763999397.877486
[2025-11-25 00:00:39] 2025-11-25 02:29:25,924 | INFO     | mean y: 2629186.3420843277
[2025-11-25 00:00:39] 2025-11-25 02:29:25,924 | INFO     | intersect: -4021320171.425311
[2025-11-25 00:00:39] 2025-11-25 02:29:25,930 | INFO     | chi2: 4.924216208946764
[2025-11-25 00:00:39] 2025-11-25 02:29:25,930 | INFO     | current chi2=4.924216208946764 (change=43.14455225373866 %)
[2025-11-25 00:00:39] 2025-11-25 02:29:25,932 | INFO     | sum of square deviations: 608513650953.0247
[2025-11-25 00:00:39] 2025-11-25 02:29:26,019 | INFO     | sum of deviations: 1103091983367.5498
[2025-11-25 00:00:39] 2025-11-25 02:29:26,019 | INFO     | mean x: 1763999550.3801918
[2025-11-25 00:00:39] 2025-11-25 02:29:26,024 | INFO     | mean y: 2635471.126996805
[2025-11-25 00:00:39] 2025-11-25 02:29:26,024 | INFO     | intersect: -3195080405.3218713
[2025-11-25 00:00:39] 2025-11-25 02:29:26,026 | INFO     | chi2: 3.1648721966126403
[2025-11-25 00:00:39] 2025-11-25 02:29:26,026 | INFO     | current chi2=3.1648721966126403 (change=35.728407073953974 %)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,032 | INFO     | sum of square deviations: 601251541474.1396
[2025-11-25 00:00:39] 2025-11-25 02:29:26,115 | INFO     | sum of deviations: 912788041166.0704
[2025-11-25 00:00:39] 2025-11-25 02:29:26,117 | INFO     | mean x: 1763999702.8837209
[2025-11-25 00:00:39] 2025-11-25 02:29:26,117 | INFO     | mean y: 2639466.5108259823
[2025-11-25 00:00:39] 2025-11-25 02:29:26,118 | INFO     | intersect: -2675370854.202865
[2025-11-25 00:00:39] 2025-11-25 02:29:26,119 | INFO     | chi2: 2.4872957044535307
[2025-11-25 00:00:39] 2025-11-25 02:29:26,119 | INFO     | current chi2=2.4872957044535307 (change=21.409284484988657 %)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,120 | INFO     | left removable region: 30
[2025-11-25 00:00:39] 2025-11-25 02:29:26,125 | INFO     | sum of square deviations: 571382979977.6346
[2025-11-25 00:00:39] 2025-11-25 02:29:26,203 | INFO     | sum of deviations: 701827820703.1903
[2025-11-25 00:00:39] 2025-11-25 02:29:26,203 | INFO     | mean x: 1763999977.389886
[2025-11-25 00:00:39] 2025-11-25 02:29:26,203 | INFO     | mean y: 2650915.2088091355
[2025-11-25 00:00:39] 2025-11-25 02:29:26,204 | INFO     | intersect: -2164064410.9993324
[2025-11-25 00:00:39] 2025-11-25 02:29:26,205 | INFO     | chi2: 0.18904499967507232
[2025-11-25 00:00:39] 2025-11-25 02:29:26,206 | INFO     | current memory leak: 1.23 B/s (using 1226 data points, chi2=0.19)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,207 | INFO     | could have reported an average CPU frequency of 2626 MHz (45 samples)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,209 | INFO     | ..............................
[2025-11-25 00:00:39] 2025-11-25 02:29:26,210 | INFO     | . Timing measurements:
[2025-11-25 00:00:39] 2025-11-25 02:29:26,210 | INFO     | . get job = 0 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,210 | INFO     | . initial setup = 12 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,210 | INFO     | . payload setup = 73 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,210 | INFO     | . stage-in = 0 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,210 | INFO     | . payload execution = 77014 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,211 | INFO     | . stage-out = 5 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,211 | INFO     | . log creation = 0 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,211 | INFO     | ..............................
[2025-11-25 00:00:39] 2025-11-25 02:29:26,323 | INFO     | 
[2025-11-25 00:00:39] 2025-11-25 02:29:26,324 | INFO     | job summary report
[2025-11-25 00:00:39] 2025-11-25 02:29:26,332 | INFO     | --------------------------------------------------
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | PanDA job id: 6894052085
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | task id: 47523659
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | errors: (none)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | pilot state: finished 
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | transexitcode: 0
[2025-11-25 00:00:39] 2025-11-25 02:29:26,333 | INFO     | exeerrorcode: 0
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | exeerrordiag: 
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | exitcode: 0
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | exitmsg: OK
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | cpuconsumptiontime: 123656 s
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | nevents: 400
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | neventsw: 0
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | pid: 2394817
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | pgrp: 2394817
[2025-11-25 00:00:39] 2025-11-25 02:29:26,334 | INFO     | corecount: 9
[2025-11-25 00:00:39] 2025-11-25 02:29:26,335 | INFO     | event service: False
[2025-11-25 00:00:39] 2025-11-25 02:29:26,335 | INFO     | sizes: {0: 2297614, 1: 2298215, 2: 2298299, 3: 2298327, 4: 2298526, 5: 2298554, 7: 2298738, 18: 2298766, 30: 2298794, 41: 2298822, 50: 2299112, 52: 2299420, 77091:
[2025-11-25 00:00:39] 2025-11-25 02:29:26,335 | INFO     | --------------------------------------------------
[2025-11-25 00:00:39] 2025-11-25 02:29:26,335 | INFO     | 
[2025-11-25 00:00:39] 2025-11-25 02:29:26,335 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 00:00:39] 2025-11-25 02:29:26,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:00:39] 2025-11-25 02:29:26,369 | INFO     | job 6894052085 has completed (purged errors)
[2025-11-25 00:00:39] 2025-11-25 02:29:26,370 | INFO     | overall cleanup function is called
[2025-11-25 00:00:39] 2025-11-25 02:29:27,380 | INFO     | --- collectZombieJob: --- 10, [2394817]
[2025-11-25 00:00:39] 2025-11-25 02:29:27,381 | INFO     | zombie collector waiting for pid 2394817
[2025-11-25 00:00:39] 2025-11-25 02:29:27,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:00:39] 2025-11-25 02:29:27,381 | INFO     | collected zombie processes
[2025-11-25 00:00:39] 2025-11-25 02:29:27,381 | INFO     | will attempt to kill all subprocesses of pid=2394817
[2025-11-25 00:00:39] 2025-11-25 02:29:28,050 | INFO     | process IDs to be killed: [2394817] (in reverse order)
[2025-11-25 00:00:39] 2025-11-25 02:29:28,153 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:00:39] 2025-11-25 02:29:28,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:00:39] 2025-11-25 02:29:28,184 | INFO     | did not find any defunct processes belonging to 2394817
[2025-11-25 00:00:39] 2025-11-25 02:29:28,194 | INFO     | did not find any defunct processes belonging to 2394817
[2025-11-25 00:00:39] 2025-11-25 02:29:28,195 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:00:39] 2025-11-25 02:29:28,196 | INFO     | ready for new job
[2025-11-25 00:00:39] 2025-11-25 02:29:28,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:00:39] 2025-11-25 02:29:28,202 | INFO     | ***************************************
[2025-11-25 00:00:39] 2025-11-25 02:29:28,203 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:00:39] 2025-11-25 02:29:28,203 | INFO     | ***************************************
[2025-11-25 00:00:39] 2025-11-25 02:29:28,203 | INFO     | 
[2025-11-25 00:00:39] 2025-11-25 02:29:28,206 | INFO     | architecture information:
[2025-11-25 00:00:39] 2025-11-25 02:29:28,206 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:00:39] 2025-11-25 02:29:28,222 | INFO     | cat /etc/os-release:
[2025-11-25 00:00:39] NAME="CentOS Linux"
[2025-11-25 00:00:39] VERSION="7 (Core)"
[2025-11-25 00:00:39] ID="centos"
[2025-11-25 00:00:39] ID_LIKE="rhel fedora"
[2025-11-25 00:00:39] VERSION_ID="7"
[2025-11-25 00:00:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:00:39] ANSI_COLOR="0;31"
[2025-11-25 00:00:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:00:39] HOME_URL="https://www.centos.org/"
[2025-11-25 00:00:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:00:39] 
[2025-11-25 00:00:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:00:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:00:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:00:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:00:39] 
[2025-11-25 00:00:39] 2025-11-25 02:29:28,222 | INFO     | ***************************************
[2025-11-25 00:00:39] 2025-11-25 02:29:28,728 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 00:00:39] 2025-11-25 02:29:28,772 | INFO     | sufficient remaining disk space (60725133312 B)
[2025-11-25 00:00:39] 2025-11-25 02:29:28,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:00:39] 2025-11-25 02:29:28,773 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:00:39] 2025-11-25 02:29:28,773 | INFO     | update_server=False
[2025-11-25 00:00:39] 2025-11-25 02:29:28,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:00:39] 2025-11-25 02:29:28,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:00:39] 2025-11-25 02:29:28,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:00:39] 2025-11-25 02:29:28,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:00:39] 2025-11-25 02:29:28,919 | INFO     | aborting loop
[2025-11-25 00:00:39] 2025-11-25 02:29:28,977 | INFO     | all payload control threads have been joined
[2025-11-25 00:00:39] 2025-11-25 02:29:29,574 | INFO     | all data control threads have been joined
[2025-11-25 00:00:39] 2025-11-25 02:29:29,691 | INFO     | all job control threads have been joined
[2025-11-25 00:00:39] 2025-11-25 02:29:29,779 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:29,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:29,925 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:29,983 | INFO     | [payload] control thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,404 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,581 | INFO     | [data] control thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,700 | INFO     | [job] control thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,785 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,823 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,865 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,901 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,904 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,907 | INFO     | [job] validate thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:30,949 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:31,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:00:39] 2025-11-25 02:29:32,352 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:32,782 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:00:39] 2025-11-25 02:29:58,954 | INFO     | PID=2380821 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 00:00:39] 2025-11-25 02:29:58,955 | INFO     | .. there are 16 such processes running
[2025-11-25 00:00:39] 2025-11-25 02:29:58,955 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:00:39] 2025-11-25 02:29:58,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:00:39] 2025-11-25 02:29:58,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:00:39] 2025-11-25 02:30:13,733 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:00:39] 2025-11-25 02:30:15,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065689425728)>', '<ExcThread(monitor, started 140065407731456)>']
[2025-11-25 00:00:39] 2025-11-25 02:30:16,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:00:39] 2025-11-25 02:30:16,098 | INFO     | [monitor] control thread has ended
[2025-11-25 00:00:39] 2025-11-25 02:30:20,265 | INFO     | all workflow threads have been joined
[2025-11-25 00:00:39] 2025-11-25 02:30:20,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:00:39] 2025-11-25 02:30:20,266 | INFO     | traces error code: 0
[2025-11-25 00:00:39] 2025-11-25 02:30:20,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:00:39] 2025-11-25 02:30:20,465 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:00:39] 2025-11-25 02:30:20,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:00:39] 2025-11-25 02:30:20,471 [wrapper] pilotpid: 2380821
[2025-11-25 00:00:39] 2025-11-25 02:30:20,474 [wrapper] Pilot exit status: 0
[2025-11-25 00:00:39] 2025-11-25 02:30:20,496 [wrapper] pandaids: 6894052085
[2025-11-25 00:00:39] 2025-11-25 02:30:20,554 [wrapper] cleanup supervisor_pilot  600936 2380822
[2025-11-25 00:00:39] 2025-11-25 02:30:20,557 [wrapper] Test setup, not cleaning
[2025-11-25 00:00:39] 2025-11-25 02:30:20,560 [wrapper] apfmon messages muted
[2025-11-25 00:00:39] 2025-11-25 02:30:20,562 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:00:39] 2025-11-25 02:30:20,565 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:00:39]  *** Error codes and diagnostics ***
[2025-11-25 00:00:39]     "exeErrorCode": 0,
[2025-11-25 00:00:39]     "exeErrorDiag": "",
[2025-11-25 00:00:39]     "pilotErrorCode": 0,
[2025-11-25 00:00:39]     "pilotErrorDiag": "",
[2025-11-25 00:00:39]  *** Listing of results directory ***
[2025-11-25 00:00:40] total 634864
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:22 queuedata.json
[2025-11-25 00:00:40] -rwx------. 1 boincer umatlas     36292 Nov 22 00:25 runpilot2-wrapper.sh
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:00:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:00 run_atlas
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:00 job.xml
[2025-11-25 00:00:40] -rw-r--r--. 2 boincer umatlas 302695544 Nov 24 00:00 EVNT.47523657._000003.pool.root.1
[2025-11-25 00:00:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:00 start_atlas.sh
[2025-11-25 00:00:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:00 shared
[2025-11-25 00:00:40] -rw-r--r--. 2 boincer umatlas    589946 Nov 24 00:00 input.tar.gz
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:00 boinc_lockfile
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas      2613 Nov 24 00:00 pandaJob.out
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas        57 Nov 24 00:00 setup.sh.local
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-25 00:00:40] drwx------. 5 boincer umatlas      4096 Nov 24 00:02 pilot3
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas 323010371 Nov 24 21:26 HITS.47523659._000059.pool.root.1
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas       531 Nov 24 21:27 boinc_task_state.xml
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas      1057 Nov 24 21:29 memory_monitor_summary.json
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas   1516227 Nov 24 21:29 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas   1246920 Nov 24 21:29 log.47523659._000059.job.log.tgz.1
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas        95 Nov 24 21:29 pilot_heartbeat.json
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas      7823 Nov 24 21:29 heartbeat.json
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas      4824 Nov 24 21:30 pilotlog.txt
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas   8991426 Nov 24 21:30 log.47523659._000059.job.log.1
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas       357 Nov 24 21:30 output.list
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas       620 Nov 24 21:30 runtime_log
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas  10260480 Nov 24 21:30 result.tar.gz
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas       659 Nov 24 21:30 TGFMDmcIvg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgzJKDmeRW4hn.diag
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas      9343 Nov 24 21:30 runtime_log.err
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas        28 Nov 25 00:00 wrapper_checkpoint.txt
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas      6618 Nov 25 00:00 init_data.xml
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 00:00 boinc_mmap_file
[2025-11-25 00:00:40] -rw-r--r--. 1 boincer umatlas     21347 Nov 25 00:00 stderr.txt
[2025-11-25 00:00:40] HITS file was successfully produced:
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas 323010371 Nov 24 21:26 shared/HITS.pool.root.1
[2025-11-25 00:00:40]  *** Contents of shared directory: ***
[2025-11-25 00:00:40] total 621668
[2025-11-25 00:00:40] -rw-r--r--. 2 boincer umatlas 302695544 Nov 24 00:00 ATLAS.root_0
[2025-11-25 00:00:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:00 start_atlas.sh
[2025-11-25 00:00:40] -rw-r--r--. 2 boincer umatlas    589946 Nov 24 00:00 input.tar.gz
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas 323010371 Nov 24 21:26 HITS.pool.root.1
[2025-11-25 00:00:40] -rw-------. 1 boincer umatlas  10260480 Nov 24 21:30 result.tar.gz
00:00:42 (2376476): run_atlas exited; CPU time 126571.889330
00:00:42 (2376476): called boinc_finish(0)

</stderr_txt>
]]>

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