Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:14 (1684222): wrapper (7.7.26015): starting
00:11:14 (1684222): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:11:14] Arguments: --nthreads 9
[2025-11-23 00:11:14] Threads: 9
[2025-11-23 00:11:14] Checking for CVMFS
[2025-11-23 00:11:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:11:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:11:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:11:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:11:18] 2.13.2.0 8058 31081 246092 153197 3 377 28097929 40960000 13569 16776704 0 29873182 99.724 21128484 35646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:11:18] CVMFS is ok
[2025-11-23 00:11:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:11:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:11:18] Further information can be found at the LHC@home message board.
[2025-11-23 00:11:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:11:18] Checking for apptainer binary...
[2025-11-23 00:11:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:11:18] Running /usr/bin/apptainer --version
[2025-11-23 00:11:18] apptainer version 1.4.4-1.el9
[2025-11-23 00:11:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:11:20] c-210-33-3.aglt2.org
[2025-11-23 00:11:20] apptainer works
[2025-11-23 00:11:20] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:11:20] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:11:20] Starting ATLAS job with PandaID=6895336865
[2025-11-23 00:11:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:37:08]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:37:08] 2025-11-24 18:31:36,400 | INFO     | time since job start (134319s) is within the limit (172800.0s)
[2025-11-24 15:37:08] 2025-11-24 18:31:36,540 | INFO     | monitor loop #7821: job 0:6895336865 is in state 'finished'
[2025-11-24 15:37:08] 2025-11-24 18:31:36,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:37:08] 2025-11-24 18:31:38,412 | INFO     | time since job start (134321s) is within the limit (172800.0s)
[2025-11-24 15:37:08] 2025-11-24 18:31:39,045 | INFO     | monitor loop #7822: job 0:6895336865 is in state 'finished'
[2025-11-24 15:37:08] 2025-11-24 18:31:39,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:37:08] 2025-11-24 18:31:40,418 | INFO     | time since job start (134323s) is within the limit (172800.0s)
[2025-11-24 15:37:08] 2025-11-24 18:31:41,577 | INFO     | monitor loop #7823: job 0:6895336865 is in state 'finished'
[2025-11-24 15:37:08] 2025-11-24 18:31:41,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:37:08] 2025-11-24 18:31:42,435 | INFO     | time since job start (134325s) is within the limit (172800.0s)
[2025-11-24 15:37:08] 2025-11-24 18:31:44,084 | INFO     | monitor loop #7824: job 0:6895336865 is in state 'finished'
[2025-11-24 15:37:08] 2025-11-24 18:31:44,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:37:08] 2025-11-24 18:31:44,443 | INFO     | time since job start (134327s) is within the limit (172800.0s)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,327 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 15:37:08] 2025-11-24 18:31:46,335 | INFO     | PID=1688134 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:37:08] 2025-11-24 18:31:46,336 | INFO     | .. there are 11 such processes running
[2025-11-24 15:37:08] 2025-11-24 18:31:46,340 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2831.4765892857154
[2025-11-24 15:37:08] 2025-11-24 18:31:46,351 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895336865/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,352 | INFO     | extracted standard info from prmon json
[2025-11-24 15:37:08] 2025-11-24 18:31:46,352 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 15:37:08] 2025-11-24 18:31:46,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:37:08] 2025-11-24 18:31:46,390 | INFO     | fitting pss+swap vs Time
[2025-11-24 15:37:08] 2025-11-24 18:31:46,393 | INFO     | sum of square deviations: 3296907335248.187
[2025-11-24 15:37:08] 2025-11-24 18:31:46,486 | INFO     | sum of deviations: 14266117389513.076
[2025-11-24 15:37:08] 2025-11-24 18:31:46,487 | INFO     | mean x: 1763942025.3592541
[2025-11-24 15:37:08] 2025-11-24 18:31:46,487 | INFO     | mean y: 3048130.3024101863
[2025-11-24 15:37:08] 2025-11-24 18:31:46,487 | INFO     | intersect: -7629742677.321611
[2025-11-24 15:37:08] 2025-11-24 18:31:46,490 | INFO     | chi2: 37.24519084452495
[2025-11-24 15:37:08] 2025-11-24 18:31:46,494 | INFO     | sum of square deviations: 3274471784924.281
[2025-11-24 15:37:08] 2025-11-24 18:31:46,582 | INFO     | sum of deviations: 15071049329274.02
[2025-11-24 15:37:08] 2025-11-24 18:31:46,582 | INFO     | mean x: 1763941872.8760254
[2025-11-24 15:37:08] 2025-11-24 18:31:46,582 | INFO     | mean y: 3053600.55515041
[2025-11-24 15:37:08] 2025-11-24 18:31:46,582 | INFO     | intersect: -8115646674.243927
[2025-11-24 15:37:08] 2025-11-24 18:31:46,585 | INFO     | chi2: 33.83156911541274
[2025-11-24 15:37:08] 2025-11-24 18:31:46,585 | INFO     | current chi2=33.83156911541274 (change=9.165268459388257 %)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,585 | INFO     | right removable region: 2193
[2025-11-24 15:37:08] 2025-11-24 18:31:46,587 | INFO     | sum of square deviations: 3274461913294.2783
[2025-11-24 15:37:08] 2025-11-24 18:31:46,595 | INFO     | monitor loop #7825: job 0:6895336865 is in state 'finished'
[2025-11-24 15:37:08] 2025-11-24 18:31:46,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,686 | INFO     | sum of deviations: 13291401603959.293
[2025-11-24 15:37:08] 2025-11-24 18:31:46,686 | INFO     | mean x: 1763942177.8760254
[2025-11-24 15:37:08] 2025-11-24 18:31:46,687 | INFO     | mean y: 3054753.188696445
[2025-11-24 15:37:08] 2025-11-24 18:31:46,687 | INFO     | intersect: -7156980853.615995
[2025-11-24 15:37:08] 2025-11-24 18:31:46,689 | INFO     | chi2: 32.63839537341236
[2025-11-24 15:37:08] 2025-11-24 18:31:46,689 | INFO     | current chi2=32.63839537341236 (change=12.36883304033275 %)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,689 | INFO     | left removable region: 10
[2025-11-24 15:37:08] 2025-11-24 18:31:46,691 | INFO     | sum of square deviations: 3225452980918.9536
[2025-11-24 15:37:08] 2025-11-24 18:31:46,787 | INFO     | sum of deviations: 13365166282668.508
[2025-11-24 15:37:08] 2025-11-24 18:31:46,787 | INFO     | mean x: 1763942147.4122767
[2025-11-24 15:37:08] 2025-11-24 18:31:46,787 | INFO     | mean y: 3067370.9060925334
[2025-11-24 15:37:08] 2025-11-24 18:31:46,787 | INFO     | intersect: -7306101373.03128
[2025-11-24 15:37:08] 2025-11-24 18:31:46,790 | INFO     | chi2: 24.883930744331945
[2025-11-24 15:37:08] 2025-11-24 18:31:46,791 | INFO     | current memory leak: 4.14 B/s (using 2183 data points, chi2=24.88)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | could have reported an average CPU frequency of 2811 MHz (76 samples)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | ..............................
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | . Timing measurements:
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | . get job = 1 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | . initial setup = 15 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | . payload setup = 72 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,794 | INFO     | . stage-in = 0 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,795 | INFO     | . payload execution = 134129 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,795 | INFO     | . stage-out = 5 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,795 | INFO     | . log creation = 2 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,795 | INFO     | ..............................
[2025-11-24 15:37:08] 2025-11-24 18:31:46,972 | INFO     | 
[2025-11-24 15:37:08] 2025-11-24 18:31:46,972 | INFO     | job summary report
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | --------------------------------------------------
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | PanDA job id: 6895336865
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | task id: 47556137
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | errors: (none)
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | pilot state: finished 
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | transexitcode: 0
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | exeerrorcode: 0
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | exeerrordiag: 
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | exitcode: 0
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | exitmsg: OK
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | cpuconsumptiontime: 248970 s
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | nevents: 1000
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | neventsw: 0
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | pid: 1699050
[2025-11-24 15:37:08] 2025-11-24 18:31:46,973 | INFO     | pgrp: 1699050
[2025-11-24 15:37:08] 2025-11-24 18:31:46,974 | INFO     | corecount: 9
[2025-11-24 15:37:08] 2025-11-24 18:31:46,974 | INFO     | event service: False
[2025-11-24 15:37:08] 2025-11-24 18:31:46,974 | INFO     | sizes: {0: 2297978, 1: 2298579, 2: 2298691, 3: 2298890, 14: 2298890, 25: 2298918, 37: 2299074, 45: 2299364, 48: 2299392, 134206: 2386091, 134213: 2395876, 134216: 
[2025-11-24 15:37:08] 2025-11-24 18:31:46,974 | INFO     | --------------------------------------------------
[2025-11-24 15:37:08] 2025-11-24 18:31:46,974 | INFO     | 
[2025-11-24 15:37:08] 2025-11-24 18:31:46,974 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:37:08] 2025-11-24 18:31:47,058 | INFO     | job 6895336865 has completed (purged errors)
[2025-11-24 15:37:08] 2025-11-24 18:31:47,058 | INFO     | overall cleanup function is called
[2025-11-24 15:37:08] 2025-11-24 18:31:48,075 | INFO     | --- collectZombieJob: --- 10, [1699050]
[2025-11-24 15:37:08] 2025-11-24 18:31:48,076 | INFO     | zombie collector waiting for pid 1699050
[2025-11-24 15:37:08] 2025-11-24 18:31:48,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:37:08] 2025-11-24 18:31:48,076 | INFO     | collected zombie processes
[2025-11-24 15:37:08] 2025-11-24 18:31:48,076 | INFO     | will attempt to kill all subprocesses of pid=1699050
[2025-11-24 15:37:08] 2025-11-24 18:31:48,429 | INFO     | process IDs to be killed: [1699050] (in reverse order)
[2025-11-24 15:37:08] 2025-11-24 18:31:48,820 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:37:08] 2025-11-24 18:31:48,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:37:08] 2025-11-24 18:31:48,837 | INFO     | did not find any defunct processes belonging to 1699050
[2025-11-24 15:37:08] 2025-11-24 18:31:48,853 | INFO     | did not find any defunct processes belonging to 1699050
[2025-11-24 15:37:08] 2025-11-24 18:31:48,858 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:37:08] 2025-11-24 18:31:48,859 | INFO     | ready for new job
[2025-11-24 15:37:08] 2025-11-24 18:31:48,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:37:08] 2025-11-24 18:31:48,871 | INFO     | ***************************************
[2025-11-24 15:37:08] 2025-11-24 18:31:48,872 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:37:08] 2025-11-24 18:31:48,872 | INFO     | ***************************************
[2025-11-24 15:37:08] 2025-11-24 18:31:48,872 | INFO     | 
[2025-11-24 15:37:08] 2025-11-24 18:31:48,875 | INFO     | architecture information:
[2025-11-24 15:37:08] 2025-11-24 18:31:48,875 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:37:08] 2025-11-24 18:31:48,912 | INFO     | cat /etc/os-release:
[2025-11-24 15:37:08] NAME="CentOS Linux"
[2025-11-24 15:37:08] VERSION="7 (Core)"
[2025-11-24 15:37:08] ID="centos"
[2025-11-24 15:37:08] ID_LIKE="rhel fedora"
[2025-11-24 15:37:08] VERSION_ID="7"
[2025-11-24 15:37:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:37:08] ANSI_COLOR="0;31"
[2025-11-24 15:37:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:37:08] HOME_URL="https://www.centos.org/"
[2025-11-24 15:37:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:37:08] 
[2025-11-24 15:37:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:37:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:37:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:37:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:37:08] 
[2025-11-24 15:37:08] 2025-11-24 18:31:48,912 | INFO     | ***************************************
[2025-11-24 15:37:08] 2025-11-24 18:31:49,419 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 15:37:08] 2025-11-24 18:31:49,566 | INFO     | sufficient remaining disk space (67173875712 B)
[2025-11-24 15:37:08] 2025-11-24 18:31:49,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:37:08] 2025-11-24 18:31:49,567 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:37:08] 2025-11-24 18:31:49,567 | INFO     | update_server=False
[2025-11-24 15:37:08] 2025-11-24 18:31:49,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:37:08] 2025-11-24 18:31:49,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:37:08] 2025-11-24 18:31:49,942 | INFO     | all payload control threads have been joined
[2025-11-24 15:37:08] 2025-11-24 18:31:49,998 | INFO     | all data control threads have been joined
[2025-11-24 15:37:08] 2025-11-24 18:31:50,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:37:08] 2025-11-24 18:31:50,105 | INFO     | aborting loop
[2025-11-24 15:37:08] 2025-11-24 18:31:50,573 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:50,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:37:08] 2025-11-24 18:31:50,907 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:50,947 | INFO     | [payload] control thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,006 | INFO     | [data] control thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,057 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,111 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,113 | INFO     | all job control threads have been joined
[2025-11-24 15:37:08] 2025-11-24 18:31:51,273 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,423 | INFO     | [job] validate thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,873 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,927 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:51,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:37:08] 2025-11-24 18:31:52,021 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:52,119 | INFO     | [job] control thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:52,870 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:52,992 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:31:53,846 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:37:08] 2025-11-24 18:32:06,541 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:37:08] 2025-11-24 18:32:08,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206335633216)>', '<ExcThread(monitor, started 140205558318848)>']
[2025-11-24 15:37:08] 2025-11-24 18:32:13,120 | INFO     | all workflow threads have been joined
[2025-11-24 15:37:08] 2025-11-24 18:32:13,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:37:08] 2025-11-24 18:32:13,121 | INFO     | traces error code: 0
[2025-11-24 15:37:08] 2025-11-24 18:32:13,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:37:08] 2025-11-24 18:32:18,843 | INFO     | PID=1688134 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:37:08] 2025-11-24 18:32:18,844 | INFO     | .. there are 11 such processes running
[2025-11-24 15:37:08] 2025-11-24 18:32:18,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:37:08] 2025-11-24 18:32:18,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:37:08] 2025-11-24 18:32:18,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:37:08] 2025-11-24 18:32:18,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:37:08] 2025-11-24 18:32:18,844 | INFO     | [monitor] control thread has ended
[2025-11-24 15:37:08] 2025-11-24 18:32:19,405 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:37:08] 2025-11-24 18:32:19,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:37:08] 2025-11-24 18:32:19,436 [wrapper] pilotpid: 1688134
[2025-11-24 15:37:08] 2025-11-24 18:32:19,463 [wrapper] Pilot exit status: 0
[2025-11-24 15:37:08] 2025-11-24 18:32:19,546 [wrapper] pandaids: 6895336865
[2025-11-24 15:37:08] 2025-11-24 18:32:19,631 [wrapper] cleanup supervisor_pilot  728283 1688135
[2025-11-24 15:37:08] 2025-11-24 18:32:19,658 [wrapper] Test setup, not cleaning
[2025-11-24 15:37:08] 2025-11-24 18:32:19,689 [wrapper] apfmon messages muted
[2025-11-24 15:37:08] 2025-11-24 18:32:19,720 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:37:08] 2025-11-24 18:32:19,753 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:37:08]  *** Error codes and diagnostics ***
[2025-11-24 15:37:08]     "exeErrorCode": 0,
[2025-11-24 15:37:08]     "exeErrorDiag": "",
[2025-11-24 15:37:08]     "pilotErrorCode": 0,
[2025-11-24 15:37:08]     "pilotErrorDiag": "",
[2025-11-24 15:37:08]  *** Listing of results directory ***
[2025-11-24 15:37:08] total 1327100
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:46 pilot3.tar.gz
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:49 queuedata.json
[2025-11-24 15:37:08] -rwx------. 1 boincer umatlas     36292 Nov 22 00:50 runpilot2-wrapper.sh
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:37:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:11 run_atlas
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:11 job.xml
[2025-11-24 15:37:08] -rw-r--r--. 2 boincer umatlas 410161884 Nov 23 00:11 EVNT.47483658._000288.pool.root.1
[2025-11-24 15:37:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:11 start_atlas.sh
[2025-11-24 15:37:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:11 shared
[2025-11-24 15:37:08] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 00:11 input.tar.gz
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:11 boinc_lockfile
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:11 pandaJob.out
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas        57 Nov 23 00:11 setup.sh.local
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas    989784 Nov 23 00:12 agis_schedconf.cvmfs.json
[2025-11-24 15:37:08] drwx------. 5 boincer umatlas      4096 Nov 23 00:12 pilot3
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas       532 Nov 24 12:58 boinc_task_state.xml
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas 905587403 Nov 24 13:30 HITS.47556137._002845.pool.root.1
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas      1058 Nov 24 13:31 memory_monitor_summary.json
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas   1516227 Nov 24 13:31 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas   3070110 Nov 24 13:31 log.47556137._002845.job.log.tgz.1
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas        95 Nov 24 13:31 pilot_heartbeat.json
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas      8637 Nov 24 13:31 heartbeat.json
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas       823 Nov 24 13:32 pilotlog.txt
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas  16574938 Nov 24 13:32 log.47556137._002845.job.log.1
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas       353 Nov 24 13:32 output.list
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas       620 Nov 24 13:32 runtime_log
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas  19660800 Nov 24 13:32 result.tar.gz
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas      9354 Nov 24 13:32 runtime_log.err
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas       665 Nov 24 13:32 FA1MDmAhvg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH0JKDmqE9TGm.diag
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas      6842 Nov 24 15:36 init_data.xml
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas        28 Nov 24 15:36 wrapper_checkpoint.txt
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 15:37 boinc_mmap_file
[2025-11-24 15:37:08] -rw-r--r--. 1 boincer umatlas     21901 Nov 24 15:37 stderr.txt
[2025-11-24 15:37:08] HITS file was successfully produced:
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas 905587403 Nov 24 13:30 shared/HITS.pool.root.1
[2025-11-24 15:37:08]  *** Contents of shared directory: ***
[2025-11-24 15:37:08] total 1304720
[2025-11-24 15:37:08] -rw-r--r--. 2 boincer umatlas 410161884 Nov 23 00:11 ATLAS.root_0
[2025-11-24 15:37:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:11 start_atlas.sh
[2025-11-24 15:37:08] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 00:11 input.tar.gz
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas 905587403 Nov 24 13:30 HITS.pool.root.1
[2025-11-24 15:37:08] -rw-------. 1 boincer umatlas  19660800 Nov 24 13:32 result.tar.gz
15:37:10 (1684222): run_atlas exited; CPU time 251164.134554
15:37:10 (1684222): called boinc_finish(0)

</stderr_txt>
]]>

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