Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:18 (3622583): wrapper (7.7.26015): starting
10:22:18 (3622583): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 10:22:18] Arguments: --nthreads 9
[2025-11-23 10:22:18] Threads: 9
[2025-11-23 10:22:18] Checking for CVMFS
[2025-11-23 10:22:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:22:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:22:20] 2.13.2.0 5795 29700 179184 153213 1 57 22030525 39288832 7277 16776704 0 18836991 99.460 25942857 38544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:22:20] CVMFS is ok
[2025-11-23 10:22:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:22:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:22:20] Further information can be found at the LHC@home message board.
[2025-11-23 10:22:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:22:20] Checking for apptainer binary...
[2025-11-23 10:22:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:22:20] Running /usr/bin/apptainer --version
[2025-11-23 10:22:20] apptainer version 1.4.4-1.el9
[2025-11-23 10:22:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:22:21] c-210-27.aglt2.org
[2025-11-23 10:22:21] apptainer works
[2025-11-23 10:22:21] Set ATHENA_PROC_NUMBER=9
[2025-11-23 10:22:21] Set ATHENA_CORE_NUMBER=9
[2025-11-23 10:22:21] Starting ATLAS job with PandaID=6895336372
[2025-11-23 10:22:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:40:03 (3622583): BOINC client no longer exists - exiting
02:40:03 (3622583): timer handler: client dead, exiting
02:47:48 (3306429): wrapper (7.7.26015): starting
02:47:48 (3306429): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 02:47:48] Arguments: --nthreads 12
[2025-11-25 02:47:48] Threads: 12
[2025-11-25 02:47:48] This job has been restarted, cleaning up previous attempt
[2025-11-25 02:47:48] Checking for CVMFS
[2025-11-25 02:47:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:47:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:47:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:47:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:47:50] 2.13.2.0 5795 32125 181212 153275 2 103 28959596 39288832 6254 16776704 0 22078271 99.517 26505956 38153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 02:47:50] CVMFS is ok
[2025-11-25 02:47:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:47:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:47:50] Further information can be found at the LHC@home message board.
[2025-11-25 02:47:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:47:50] Checking for apptainer binary...
[2025-11-25 02:47:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:47:50] Running /usr/bin/apptainer --version
[2025-11-25 02:47:50] apptainer version 1.4.4-1.el9
[2025-11-25 02:47:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:47:50] c-210-27.aglt2.org
[2025-11-25 02:47:50] apptainer works
[2025-11-25 02:47:50] Set ATHENA_PROC_NUMBER=12
[2025-11-25 02:47:50] Set ATHENA_CORE_NUMBER=12
[2025-11-25 02:47:50] Starting ATLAS job with PandaID=6895336372
[2025-11-25 02:47:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:28:50 (3529860): wrapper (7.7.26015): starting
04:28:50 (3529860): wrapper: running run_atlas (--nthreads 11)
[2025-11-25 04:28:50] Arguments: --nthreads 11
[2025-11-25 04:28:50] Threads: 11
[2025-11-25 04:28:50] This job has been restarted, cleaning up previous attempt
[2025-11-25 04:28:50] Checking for CVMFS
[2025-11-25 04:28:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:28:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:28:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:28:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:28:51] 2.13.2.0 5795 32226 179804 153277 1 161 29276868 39288833 5553 16776704 0 22289337 99.520 26569008 38124 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 04:28:51] CVMFS is ok
[2025-11-25 04:28:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:28:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:28:51] Further information can be found at the LHC@home message board.
[2025-11-25 04:28:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:28:51] Checking for apptainer binary...
[2025-11-25 04:28:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:28:51] Running /usr/bin/apptainer --version
[2025-11-25 04:28:51] apptainer version 1.4.4-1.el9
[2025-11-25 04:28:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:28:51] c-210-27.aglt2.org
[2025-11-25 04:28:51] apptainer works
[2025-11-25 04:28:51] Set ATHENA_PROC_NUMBER=11
[2025-11-25 04:28:51] Set ATHENA_CORE_NUMBER=11
[2025-11-25 04:28:51] Starting ATLAS job with PandaID=6895336372
[2025-11-25 04:28:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:29:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:29:39] 2025-11-26 17:28:30,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:29:39] 2025-11-26 17:28:30,654 | INFO     | time since job start (115169s) is within the limit (172800.0s)
[2025-11-26 12:29:39] 2025-11-26 17:28:32,663 | INFO     | time since job start (115171s) is within the limit (172800.0s)
[2025-11-26 12:29:39] 2025-11-26 17:28:32,789 | INFO     | monitor loop #6893: job 0:6895336372 is in state 'finished'
[2025-11-26 12:29:39] 2025-11-26 17:28:32,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:29:39] 2025-11-26 17:28:34,368 | INFO     | PID=3537270 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:29:39] 2025-11-26 17:28:34,368 | INFO     | .. there are 9 such processes running
[2025-11-26 12:29:39] 2025-11-26 17:28:35,294 | INFO     | monitor loop #6894: job 0:6895336372 is in state 'finished'
[2025-11-26 12:29:39] 2025-11-26 17:28:35,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:29:39] 2025-11-26 17:28:35,370 | INFO     | time since job start (115174s) is within the limit (172800.0s)
[2025-11-26 12:29:39] 2025-11-26 17:28:37,378 | INFO     | time since job start (115176s) is within the limit (172800.0s)
[2025-11-26 12:29:39] 2025-11-26 17:28:37,800 | INFO     | monitor loop #6895: job 0:6895336372 is in state 'finished'
[2025-11-26 12:29:39] 2025-11-26 17:28:37,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:29:39] 2025-11-26 17:28:39,384 | INFO     | time since job start (115178s) is within the limit (172800.0s)
[2025-11-26 12:29:39] 2025-11-26 17:28:39,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:29:39] 2025-11-26 17:28:39,778 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.166875
[2025-11-26 12:29:39] 2025-11-26 17:28:39,794 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895336372/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:29:39] 2025-11-26 17:28:39,795 | INFO     | extracted standard info from prmon json
[2025-11-26 12:29:39] 2025-11-26 17:28:39,795 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:29:39] 2025-11-26 17:28:39,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:29:39] 2025-11-26 17:28:39,867 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:29:39] 2025-11-26 17:28:39,870 | INFO     | sum of square deviations: 2083760661974.1667
[2025-11-26 12:29:39] 2025-11-26 17:28:40,037 | INFO     | sum of deviations: 6810013092247.371
[2025-11-26 12:29:39] 2025-11-26 17:28:40,037 | INFO     | mean x: 1764120498.880763
[2025-11-26 12:29:39] 2025-11-26 17:28:40,038 | INFO     | mean y: 3417892.1616322203
[2025-11-26 12:29:39] 2025-11-26 17:28:40,042 | INFO     | intersect: -5761967697.89847
[2025-11-26 12:29:39] 2025-11-26 17:28:40,045 | INFO     | chi2: 17.500153504446633
[2025-11-26 12:29:39] 2025-11-26 17:28:40,052 | INFO     | sum of square deviations: 2067246902748.1167
[2025-11-26 12:29:39] 2025-11-26 17:28:40,192 | INFO     | sum of deviations: 7573304338774.576
[2025-11-26 12:29:39] 2025-11-26 17:28:40,192 | INFO     | mean x: 1764120346.401169
[2025-11-26 12:29:39] 2025-11-26 17:28:40,197 | INFO     | mean y: 3424939.280021254
[2025-11-26 12:29:39] 2025-11-26 17:28:40,197 | INFO     | intersect: -6459383279.593076
[2025-11-26 12:29:39] 2025-11-26 17:28:40,199 | INFO     | chi2: 14.150188583998423
[2025-11-26 12:29:39] 2025-11-26 17:28:40,200 | INFO     | current chi2=14.150188583998423 (change=19.142488776438526 %)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,200 | INFO     | right removable region: 1881
[2025-11-26 12:29:39] 2025-11-26 17:28:40,206 | INFO     | sum of square deviations: 2067240014900.6016
[2025-11-26 12:29:39] 2025-11-26 17:28:40,382 | INFO     | sum of deviations: 6223225599250.127
[2025-11-26 12:29:39] 2025-11-26 17:28:40,382 | INFO     | mean x: 1764120651.392136
[2025-11-26 12:29:39] 2025-11-26 17:28:40,383 | INFO     | mean y: 3423304.8575982996
[2025-11-26 12:29:39] 2025-11-26 17:28:40,383 | INFO     | intersect: -5307290844.818547
[2025-11-26 12:29:39] 2025-11-26 17:28:40,385 | INFO     | chi2: 15.391839350716667
[2025-11-26 12:29:39] 2025-11-26 17:28:40,385 | INFO     | current chi2=15.391839350716667 (change=12.04740377388268 %)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,385 | INFO     | left removable region: 10
[2025-11-26 12:29:39] 2025-11-26 17:28:40,392 | INFO     | sum of square deviations: 2031209413292.3809
[2025-11-26 12:29:39] 2025-11-26 17:28:40,398 | INFO     | monitor loop #6896: job 0:6895336372 is in state 'finished'
[2025-11-26 12:29:39] 2025-11-26 17:28:40,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,563 | INFO     | sum of deviations: 6919045254213.596
[2025-11-26 12:29:39] 2025-11-26 17:28:40,563 | INFO     | mean x: 1764120620.9321218
[2025-11-26 12:29:39] 2025-11-26 17:28:40,563 | INFO     | mean y: 3433723.414216996
[2025-11-26 12:29:39] 2025-11-26 17:28:40,563 | INFO     | intersect: -6005809011.600496
[2025-11-26 12:29:39] 2025-11-26 17:28:40,570 | INFO     | chi2: 11.299194362478634
[2025-11-26 12:29:39] 2025-11-26 17:28:40,571 | INFO     | current memory leak: 3.41 B/s (using 1871 data points, chi2=11.30)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,576 | INFO     | could have reported an average CPU frequency of 2600 MHz (66 samples)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | ..............................
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . Timing measurements:
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . get job = 0 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . initial setup = 1 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . payload setup = 5 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . stage-in = 0 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . payload execution = 115111 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . stage-out = 9 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,577 | INFO     | . log creation = 3 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,578 | INFO     | ..............................
[2025-11-26 12:29:39] 2025-11-26 17:28:40,794 | INFO     | 
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | job summary report
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | --------------------------------------------------
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | PanDA job id: 6895336372
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | task id: 47556137
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | errors: (none)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:29:39] 2025-11-26 17:28:40,797 | INFO     | pilot state: finished 
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | transexitcode: 0
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | exeerrorcode: 0
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | exeerrordiag: 
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | exitcode: 0
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | exitmsg: OK
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | cpuconsumptiontime: 310711 s
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | nevents: 1000
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | neventsw: 0
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | pid: 3550218
[2025-11-26 12:29:39] 2025-11-26 17:28:40,798 | INFO     | pgrp: 3550218
[2025-11-26 12:29:39] 2025-11-26 17:28:40,799 | INFO     | corecount: 11
[2025-11-26 12:29:39] 2025-11-26 17:28:40,799 | INFO     | event service: False
[2025-11-26 12:29:39] 2025-11-26 17:28:40,799 | INFO     | sizes: {0: 2284310, 1: 2284310, 5: 2284600, 11: 2284656, 115121: 2364136, 115131: 2373135, 115133: 2373319, 115164: 2373565}
[2025-11-26 12:29:39] 2025-11-26 17:28:40,799 | INFO     | --------------------------------------------------
[2025-11-26 12:29:39] 2025-11-26 17:28:40,799 | INFO     | 
[2025-11-26 12:29:39] 2025-11-26 17:28:40,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 12:29:39] 2025-11-26 17:28:40,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:29:39] 2025-11-26 17:28:40,875 | INFO     | job 6895336372 has completed (purged errors)
[2025-11-26 12:29:39] 2025-11-26 17:28:40,875 | INFO     | overall cleanup function is called
[2025-11-26 12:29:39] 2025-11-26 17:28:41,906 | INFO     | --- collectZombieJob: --- 10, [3550218]
[2025-11-26 12:29:39] 2025-11-26 17:28:41,906 | INFO     | zombie collector waiting for pid 3550218
[2025-11-26 12:29:39] 2025-11-26 17:28:41,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:29:39] 2025-11-26 17:28:41,906 | INFO     | collected zombie processes
[2025-11-26 12:29:39] 2025-11-26 17:28:41,906 | INFO     | will attempt to kill all subprocesses of pid=3550218
[2025-11-26 12:29:39] 2025-11-26 17:28:42,350 | INFO     | process IDs to be killed: [3550218] (in reverse order)
[2025-11-26 12:29:39] 2025-11-26 17:28:42,489 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:29:39] 2025-11-26 17:28:42,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:29:39] 2025-11-26 17:28:42,504 | INFO     | did not find any defunct processes belonging to 3550218
[2025-11-26 12:29:39] 2025-11-26 17:28:42,527 | INFO     | did not find any defunct processes belonging to 3550218
[2025-11-26 12:29:39] 2025-11-26 17:28:42,533 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:29:39] 2025-11-26 17:28:42,533 | INFO     | ready for new job
[2025-11-26 12:29:39] 2025-11-26 17:28:42,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:29:39] 2025-11-26 17:28:42,555 | INFO     | ***************************************
[2025-11-26 12:29:39] 2025-11-26 17:28:42,556 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:29:39] 2025-11-26 17:28:42,556 | INFO     | ***************************************
[2025-11-26 12:29:39] 2025-11-26 17:28:42,556 | INFO     | 
[2025-11-26 12:29:39] 2025-11-26 17:28:42,562 | INFO     | architecture information:
[2025-11-26 12:29:39] 2025-11-26 17:28:42,563 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:29:39] 2025-11-26 17:28:42,622 | INFO     | cat /etc/os-release:
[2025-11-26 12:29:39] NAME="CentOS Linux"
[2025-11-26 12:29:39] VERSION="7 (Core)"
[2025-11-26 12:29:39] ID="centos"
[2025-11-26 12:29:39] ID_LIKE="rhel fedora"
[2025-11-26 12:29:39] VERSION_ID="7"
[2025-11-26 12:29:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:29:39] ANSI_COLOR="0;31"
[2025-11-26 12:29:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:29:39] HOME_URL="https://www.centos.org/"
[2025-11-26 12:29:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:29:39] 
[2025-11-26 12:29:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:29:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:29:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:29:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:29:39] 
[2025-11-26 12:29:39] 2025-11-26 17:28:42,622 | INFO     | ***************************************
[2025-11-26 12:29:39] 2025-11-26 17:28:43,126 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 12:29:39] 2025-11-26 17:28:43,198 | INFO     | sufficient remaining disk space (48314187776 B)
[2025-11-26 12:29:39] 2025-11-26 17:28:43,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:29:39] 2025-11-26 17:28:43,199 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:29:39] 2025-11-26 17:28:43,199 | INFO     | update_server=False
[2025-11-26 12:29:39] 2025-11-26 17:28:43,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:29:39] 2025-11-26 17:28:43,244 | INFO     | all job control threads have been joined
[2025-11-26 12:29:39] 2025-11-26 17:28:43,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:29:39] 2025-11-26 17:28:43,812 | INFO     | all data control threads have been joined
[2025-11-26 12:29:39] 2025-11-26 17:28:43,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:29:39] 2025-11-26 17:28:43,908 | INFO     | aborting loop
[2025-11-26 12:29:39] 2025-11-26 17:28:43,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:29:39] 2025-11-26 17:28:44,207 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:44,250 | INFO     | [job] control thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:44,331 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:44,647 | INFO     | all payload control threads have been joined
[2025-11-26 12:29:39] 2025-11-26 17:28:44,688 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:44,818 | INFO     | [data] control thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:44,914 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:44,914 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,041 | INFO     | [job] validate thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,041 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,060 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,149 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,653 | INFO     | [payload] control thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,694 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:45,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:29:39] 2025-11-26 17:28:45,971 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:46,819 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:28:47,749 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:29:39] 2025-11-26 17:29:13,009 | INFO     | PID=3537270 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:29:39] 2025-11-26 17:29:13,009 | INFO     | .. there are 9 such processes running
[2025-11-26 12:29:39] 2025-11-26 17:29:13,009 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:29:39] 2025-11-26 17:29:13,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:29:39] 2025-11-26 17:29:13,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:29:39] 2025-11-26 17:29:24,749 [wrapper] supervise_pilot (15 min periods counter: 129)
[2025-11-26 12:29:39] 2025-11-26 17:29:33,325 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:29:39] 2025-11-26 17:29:33,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955202897728)>', '<ExcThread(monitor, started 139954587952896)>']
[2025-11-26 12:29:39] 2025-11-26 17:29:34,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:29:39] 2025-11-26 17:29:34,187 | INFO     | [monitor] control thread has ended
[2025-11-26 12:29:39] 2025-11-26 17:29:38,477 | INFO     | all workflow threads have been joined
[2025-11-26 12:29:39] 2025-11-26 17:29:38,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:29:39] 2025-11-26 17:29:38,478 | INFO     | traces error code: 0
[2025-11-26 12:29:39] 2025-11-26 17:29:38,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:29:39] 2025-11-26 17:29:38,778 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:29:39] 2025-11-26 17:29:38,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:29:39] 2025-11-26 17:29:38,830 [wrapper] pilotpid: 3537270
[2025-11-26 12:29:39] 2025-11-26 17:29:38,848 [wrapper] Pilot exit status: 0
[2025-11-26 12:29:39] 2025-11-26 17:29:38,944 [wrapper] pandaids: 6895336372 6895336372 6895336372
[2025-11-26 12:29:39] 2025-11-26 17:29:39,158 [wrapper] cleanup supervisor_pilot 2980655 3537271
[2025-11-26 12:29:39] 2025-11-26 17:29:39,171 [wrapper] Test setup, not cleaning
[2025-11-26 12:29:39] 2025-11-26 17:29:39,190 [wrapper] apfmon messages muted
[2025-11-26 12:29:39] 2025-11-26 17:29:39,205 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:29:39] 2025-11-26 17:29:39,224 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:29:39]  *** Error codes and diagnostics ***
[2025-11-26 12:29:39]     "exeErrorCode": 0,
[2025-11-26 12:29:39]     "exeErrorDiag": "",
[2025-11-26 12:29:39]     "pilotErrorCode": 0,
[2025-11-26 12:29:39]     "pilotErrorDiag": "",
[2025-11-26 12:29:39]  *** Listing of results directory ***
[2025-11-26 12:29:39] total 1737220
[2025-11-26 12:29:39] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:30 queuedata.json
[2025-11-26 12:29:39] -rwx------. 1 boincer umatlas     36292 Nov 22 00:30 runpilot2-wrapper.sh
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas       100 Nov 23 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:29:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 10:22 run_atlas
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas       105 Nov 23 10:22 job.xml
[2025-11-26 12:29:39] -rw-r--r--. 3 boincer umatlas 410074213 Nov 23 10:22 EVNT.47483658._000278.pool.root.1
[2025-11-26 12:29:39] -rw-r--r--. 3 boincer umatlas 410074213 Nov 23 10:22 ATLAS.root_0
[2025-11-26 12:29:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 10:22 shared
[2025-11-26 12:29:39] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 10:22 input.tar.gz
[2025-11-26 12:29:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 10:22 start_atlas.sh
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas         0 Nov 23 10:22 boinc_lockfile
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 04:28 pandaJob.out
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas        57 Nov 25 04:28 setup.sh.local
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas    991894 Nov 25 04:29 agis_schedconf.cvmfs.json
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas       534 Nov 26 11:51 boinc_task_state.xml
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas      6662 Nov 26 12:18 init_data.xml
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas 919631981 Nov 26 12:26 HITS.47556137._002742.pool.root.1
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas      1071 Nov 26 12:27 memory_monitor_summary.json
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas   3096043 Nov 26 12:28 log.47556137._002742.job.log.tgz.1
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas        96 Nov 26 12:28 pilot_heartbeat.json
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas      8639 Nov 26 12:28 heartbeat.json
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas      4823 Nov 26 12:29 pilotlog.txt
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas  14511702 Nov 26 12:29 log.47556137._002742.job.log.1
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas        30 Nov 26 12:29 wrapper_checkpoint.txt
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:29 boinc_mmap_file
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas       353 Nov 26 12:29 output.list
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:29 runtime_log
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas  17623040 Nov 26 12:29 result.tar.gz
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas      9431 Nov 26 12:29 runtime_log.err
[2025-11-26 12:29:39] -rw-------. 1 boincer umatlas       917 Nov 26 12:29 iKlLDmaNvg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhyHKDmpbdRdn.diag
[2025-11-26 12:29:39] -rw-r--r--. 1 boincer umatlas     26286 Nov 26 12:29 stderr.txt
[2025-11-26 12:29:40] HITS file was successfully produced:
[2025-11-26 12:29:40] -rw-------. 1 boincer umatlas 919631981 Nov 26 12:26 shared/HITS.pool.root.1
[2025-11-26 12:29:40]  *** Contents of shared directory: ***
[2025-11-26 12:29:40] total 1316356
[2025-11-26 12:29:40] -rw-r--r--. 3 boincer umatlas 410074213 Nov 23 10:22 ATLAS.root_0
[2025-11-26 12:29:40] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 10:22 input.tar.gz
[2025-11-26 12:29:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 10:22 start_atlas.sh
[2025-11-26 12:29:40] -rw-------. 1 boincer umatlas 919631981 Nov 26 12:26 HITS.pool.root.1
[2025-11-26 12:29:40] -rw-------. 1 boincer umatlas  17623040 Nov 26 12:29 result.tar.gz
12:29:41 (3529860): run_atlas exited; CPU time 311980.304369
12:29:41 (3529860): called boinc_finish(0)

</stderr_txt>
]]>

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