Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:51:18 (3145793): wrapper (7.7.26015): starting
20:51:18 (3145793): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 20:51:18] Arguments: --nthreads 12
[2025-11-22 20:51:18] Threads: 12
[2025-11-22 20:51:18] Checking for CVMFS
[2025-11-22 20:51:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:51:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:51:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:51:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:51:19] 2.11.5.0 2756331 23566 341144 153197 2 292 31188970 45568001 9151 130560 0 177666537 99.788 107482425 23710 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-22 20:51:19] CVMFS is ok
[2025-11-22 20:51:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:51:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:51:19] Further information can be found at the LHC@home message board.
[2025-11-22 20:51:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:51:19] Checking for apptainer binary...
[2025-11-22 20:51:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:51:19] Running /usr/bin/apptainer --version
[2025-11-22 20:51:19] apptainer version 1.4.1-1.el9
[2025-11-22 20:51:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:51:19] wns0075.triumf.lcg
[2025-11-22 20:51:19] apptainer works
[2025-11-22 20:51:19] Set ATHENA_PROC_NUMBER=12
[2025-11-22 20:51:19] Set ATHENA_CORE_NUMBER=12
[2025-11-22 20:51:19] Starting ATLAS job with PandaID=6895345515
[2025-11-22 20:51:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:56:40]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:56:40] 2025-11-23 04:55:34,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 20:56:40] 2025-11-23 04:55:34,536 | WARNING  | wrong length of table data, x=[1763873526.0, 1763873587.0], y=[1318.0, 559620.0] (must be same and length>=4)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,537 | INFO     | could have reported an average CPU frequency of 1354 MHz (4 samples)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | ..............................
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . Timing measurements:
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . get job = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . initial setup = 3 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . payload setup = 8 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . stage-in = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . payload execution = 85 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . stage-out = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | . log creation = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | ..............................
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895345515/pilotlog.txt
[2025-11-22 20:56:40] 2025-11-23 04:55:34,555 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 20:56:40] - Log from pilotlog.txt -
[2025-11-22 20:56:40] 2025-11-23 04:55:34,533 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895345515/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,534 | INFO     | extracted standard info from prmon json
[2025-11-22 20:56:40] 2025-11-23 04:55:34,534 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:56:40] 2025-11-23 04:55:34,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:56:40] 2025-11-23 04:55:34,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 20:56:40] 2025-11-23 04:55:34,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 20:56:40] 2025-11-23 04:55:34,536 | WARNING  | wrong length of table data, x=[1763873526.0, 1763873587.0], y=[1318.0, 559620.0] (must be same and length>=4)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,537 | INFO     | could have reported an average CPU frequency of 1354 MHz (4 samples)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | ..............................
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . Timing measurements:
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . get job = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . initial setup = 3 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . payload setup = 8 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . stage-in = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . payload execution = 85 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . stage-out = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | . log creation = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | ..............................
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895345515/pilotlog.txt
[2025-11-22 20:56:40] 2025-11-23 04:55:34,555 | WARNING  | 
[2025-11-22 20:56:40] [begin log extracts]
[2025-11-22 20:56:40] - Log from pilotlog.txt -
[2025-11-22 20:56:40] 2025-11-23 04:55:34,533 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895345515/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,534 | INFO     | extracted standard info from prmon json
[2025-11-22 20:56:40] 2025-11-23 04:55:34,534 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:56:40] 2025-11-23 04:55:34,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:56:40] 2025-11-23 04:55:34,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 20:56:40] 2025-11-23 04:55:34,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 20:56:40] 2025-11-23 04:55:34,536 | WARNING  | wrong length of table data, x=[1763873526.0, 1763873587.0], y=[1318.0, 559620.0] (must be same and length>=4)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,537 | INFO     | could have reported an average CPU frequency of 1354 MHz (4 samples)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | ..............................
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . Timing measurements:
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . get job = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . initial setup = 3 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . payload setup = 8 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . stage-in = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . payload execution = 85 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,538 | INFO     | . stage-out = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | . log creation = 0 s
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | ..............................
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 20:56:40] 2025-11-23 04:55:34,539 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895345515/pilotlog.txt
[2025-11-22 20:56:40] [end log extracts]
[2025-11-22 20:56:40] 2025-11-23 04:55:34,556 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 20:56:40] 2025-11-23 04:55:34,557 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 20:56:40] 2025-11-23 04:55:35,163 | INFO     | 
[2025-11-22 20:56:40] 2025-11-23 04:55:35,163 | INFO     | job summary report
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | --------------------------------------------------
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | PanDA job id: 6895345515
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | task id: 47556137
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 20:53:20,282 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | pilot state: failed 
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | transexitcode: 65
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | exeerrorcode: 65
[2025-11-22 20:56:40] 2025-11-23 04:55:35,164 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | exitcode: 65
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | cpuconsumptiontime: 78 s
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | nevents: 0
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | neventsw: 0
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | pid: 3156005
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | pgrp: 3156005
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | corecount: 12
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | event service: False
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | sizes: {0: 2298581, 1: 2298780, 7: 2299042, 12: 2299070, 97: 2324495, 99: 2328785, 101: 2328941, 224: 2329107}
[2025-11-22 20:56:40] 2025-11-23 04:55:35,165 | INFO     | --------------------------------------------------
[2025-11-22 20:56:40] 2025-11-23 04:55:35,166 | INFO     | 
[2025-11-22 20:56:40] 2025-11-23 04:55:35,166 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 20:56:40] 2025-11-23 04:55:35,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:56:40] 2025-11-23 04:55:35,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:56:40] 2025-11-23 04:55:35,191 | INFO     | job 6895345515 has completed (purged errors)
[2025-11-22 20:56:40] 2025-11-23 04:55:35,191 | INFO     | overall cleanup function is called
[2025-11-22 20:56:40] 2025-11-23 04:55:36,199 | INFO     | --- collectZombieJob: --- 10, [3156005]
[2025-11-22 20:56:40] 2025-11-23 04:55:36,200 | INFO     | zombie collector waiting for pid 3156005
[2025-11-22 20:56:40] 2025-11-23 04:55:36,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:56:40] 2025-11-23 04:55:36,200 | INFO     | collected zombie processes
[2025-11-22 20:56:40] 2025-11-23 04:55:36,200 | INFO     | will attempt to kill all subprocesses of pid=3156005
[2025-11-22 20:56:40] 2025-11-23 04:55:36,473 | INFO     | process IDs to be killed: [3156005] (in reverse order)
[2025-11-22 20:56:40] 2025-11-23 04:55:36,567 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:56:40] 2025-11-23 04:55:36,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:56:40] 2025-11-23 04:55:36,577 | INFO     | did not find any defunct processes belonging to 3156005
[2025-11-22 20:56:40] 2025-11-23 04:55:36,587 | INFO     | did not find any defunct processes belonging to 3156005
[2025-11-22 20:56:40] 2025-11-23 04:55:36,588 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:56:40] 2025-11-23 04:55:36,589 | INFO     | ready for new job
[2025-11-22 20:56:40] 2025-11-23 04:55:36,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:56:40] 2025-11-23 04:55:36,591 | INFO     | ***************************************
[2025-11-22 20:56:40] 2025-11-23 04:55:36,592 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:56:40] 2025-11-23 04:55:36,592 | INFO     | ***************************************
[2025-11-22 20:56:40] 2025-11-23 04:55:36,592 | INFO     | 
[2025-11-22 20:56:40] 2025-11-23 04:55:36,595 | INFO     | architecture information:
[2025-11-22 20:56:40] 2025-11-23 04:55:36,596 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:56:40] 2025-11-23 04:55:36,611 | INFO     | cat /etc/os-release:
[2025-11-22 20:56:40] NAME="CentOS Linux"
[2025-11-22 20:56:40] VERSION="7 (Core)"
[2025-11-22 20:56:40] ID="centos"
[2025-11-22 20:56:40] ID_LIKE="rhel fedora"
[2025-11-22 20:56:40] VERSION_ID="7"
[2025-11-22 20:56:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:56:40] ANSI_COLOR="0;31"
[2025-11-22 20:56:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:56:40] HOME_URL="https://www.centos.org/"
[2025-11-22 20:56:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:56:40] 
[2025-11-22 20:56:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:56:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:56:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:56:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:56:40] 
[2025-11-22 20:56:40] 2025-11-23 04:55:36,612 | INFO     | ***************************************
[2025-11-22 20:56:40] 2025-11-23 04:55:37,114 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 20:56:40] 2025-11-23 04:55:37,134 | INFO     | sufficient remaining disk space (1864348205056 B)
[2025-11-22 20:56:40] 2025-11-23 04:55:37,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:56:40] 2025-11-23 04:55:37,135 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:56:40] 2025-11-23 04:55:37,135 | INFO     | update_server=False
[2025-11-22 20:56:40] 2025-11-23 04:55:37,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:56:40] 2025-11-23 04:55:37,689 | INFO     | all data control threads have been joined
[2025-11-22 20:56:40] 2025-11-23 04:55:37,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:56:40] 2025-11-23 04:55:37,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:56:40] 2025-11-23 04:55:37,986 | INFO     | aborting loop
[2025-11-22 20:56:40] 2025-11-23 04:55:38,014 | INFO     | all payload control threads have been joined
[2025-11-22 20:56:40] 2025-11-23 04:55:38,141 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:38,256 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:38,431 | INFO     | all job control threads have been joined
[2025-11-22 20:56:40] 2025-11-23 04:55:38,635 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:38,694 | INFO     | [data] control thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:38,698 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:38,811 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:38,991 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,019 | INFO     | [payload] control thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,270 | INFO     | [job] validate thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,436 | INFO     | [job] control thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,578 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:56:40] 2025-11-23 04:55:39,756 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:39,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:56:40] 2025-11-23 04:55:40,692 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:55:43,794 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:56:40] 2025-11-23 04:56:07,590 | INFO     | PID=3149461 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 20:56:40] 2025-11-23 04:56:07,590 | INFO     | .. there are 14 such processes running
[2025-11-22 20:56:40] 2025-11-23 04:56:07,591 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:56:40] 2025-11-23 04:56:07,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:56:40] 2025-11-23 04:56:07,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:56:40] 2025-11-23 04:56:32,997 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:56:40] 2025-11-23 04:56:35,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567286310720)>', '<ExcThread(monitor, started 140566604007168)>']
[2025-11-22 20:56:40] 2025-11-23 04:56:35,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:56:40] 2025-11-23 04:56:35,731 | INFO     | [monitor] control thread has ended
[2025-11-22 20:56:40] 2025-11-23 04:56:40,094 | INFO     | all workflow threads have been joined
[2025-11-22 20:56:40] 2025-11-23 04:56:40,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:56:40] 2025-11-23 04:56:40,095 | INFO     | traces error code: 0
[2025-11-22 20:56:40] 2025-11-23 04:56:40,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:56:40] 2025-11-23 04:56:40,271 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:56:40] 2025-11-23 04:56:40,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:56:40] 2025-11-23 04:56:40,278 [wrapper] pilotpid: 3149461
[2025-11-22 20:56:40] 2025-11-23 04:56:40,281 [wrapper] Pilot exit status: 0
[2025-11-22 20:56:40] 2025-11-23 04:56:40,293 [wrapper] pandaids: 6895345515
[2025-11-22 20:56:40] 2025-11-23 04:56:40,364 [wrapper] cleanup supervisor_pilot 3149467 3149462
[2025-11-22 20:56:40] 2025-11-23 04:56:40,368 [wrapper] Test setup, not cleaning
[2025-11-22 20:56:40] 2025-11-23 04:56:40,372 [wrapper] apfmon messages muted
[2025-11-22 20:56:40] 2025-11-23 04:56:40,375 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:56:40] 2025-11-23 04:56:40,379 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:56:40]  *** Error codes and diagnostics ***
[2025-11-22 20:56:40]     "exeErrorCode": 65,
[2025-11-22 20:56:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 20:56:40]     "pilotErrorCode": 1305,
[2025-11-22 20:56:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 20:56:40]  *** Listing of results directory ***
[2025-11-22 20:56:40] total 403376
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc    576529 Nov 22 09:17 pilot3.tar.gz
[2025-11-22 20:56:40] -rwx------. 1 boinc boinc     36292 Nov 22 09:27 runpilot2-wrapper.sh
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc      5112 Nov 22 09:27 queuedata.json
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc       100 Nov 22 20:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:56:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 20:51 run_atlas
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc       105 Nov 22 20:51 job.xml
[2025-11-22 20:56:40] -rw-r--r--. 2 boinc boinc 408853824 Nov 22 20:51 EVNT.47483658._000449.pool.root.1
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc      6594 Nov 22 20:51 init_data.xml
[2025-11-22 20:56:40] -rw-r--r--. 2 boinc boinc     15847 Nov 22 20:51 start_atlas.sh
[2025-11-22 20:56:40] drwxrwx--x. 2 boinc boinc      4096 Nov 22 20:51 shared
[2025-11-22 20:56:40] -rw-r--r--. 2 boinc boinc    590099 Nov 22 20:51 input.tar.gz
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc         0 Nov 22 20:51 boinc_lockfile
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc      2784 Nov 22 20:51 pandaJob.out
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc    989784 Nov 22 20:51 agis_schedconf.cvmfs.json
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc   1526164 Nov 22 20:51 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:56:40] drwx------. 5 boinc boinc      4096 Nov 22 20:51 pilot3
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc       523 Nov 22 20:52 boinc_task_state.xml
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc       997 Nov 22 20:53 memory_monitor_summary.json
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc     48155 Nov 22 20:53 log.47556137._004448.job.log.tgz.1
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc     10337 Nov 22 20:55 heartbeat.json
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc        95 Nov 22 20:55 pilot_heartbeat.json
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc      8192 Nov 22 20:56 boinc_mmap_file
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc        23 Nov 22 20:56 wrapper_checkpoint.txt
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc      4823 Nov 22 20:56 pilotlog.txt
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc     97378 Nov 22 20:56 log.47556137._004448.job.log.1
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc       186 Nov 22 20:56 output.list
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc       620 Nov 22 20:56 runtime_log
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc    163840 Nov 22 20:56 result.tar.gz
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc       645 Nov 22 20:56 x7ENDmKZ6g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5CIKDmBzlDHm.diag
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc      8636 Nov 22 20:56 runtime_log.err
[2025-11-22 20:56:40] -rw-r--r--. 1 boinc boinc     22478 Nov 22 20:56 stderr.txt
[2025-11-22 20:56:40] No HITS result produced
[2025-11-22 20:56:40]  *** Contents of shared directory: ***
[2025-11-22 20:56:40] total 400032
[2025-11-22 20:56:40] -rw-r--r--. 2 boinc boinc 408853824 Nov 22 20:51 ATLAS.root_0
[2025-11-22 20:56:40] -rw-r--r--. 2 boinc boinc     15847 Nov 22 20:51 start_atlas.sh
[2025-11-22 20:56:40] -rw-r--r--. 2 boinc boinc    590099 Nov 22 20:51 input.tar.gz
[2025-11-22 20:56:40] -rw-------. 1 boinc boinc    163840 Nov 22 20:56 result.tar.gz
20:56:41 (3145793): run_atlas exited; CPU time 72.873651
20:56:41 (3145793): called boinc_finish(0)

</stderr_txt>
]]>

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