Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:59 (2593483): wrapper (7.7.26015): starting
00:01:59 (2593483): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:01:59] Arguments: --nthreads 9
[2025-11-23 00:01:59] Threads: 9
[2025-11-23 00:01:59] Checking for CVMFS
[2025-11-23 00:01:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:02:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:02:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:02:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:02:01] 2.13.3.0 5206 2371 239420 153197 0 794 29937764 40960001 49978 16776704 0 20856600 99.825 9192973 29880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:02:01] CVMFS is ok
[2025-11-23 00:02:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:02:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:02:01] Further information can be found at the LHC@home message board.
[2025-11-23 00:02:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:02:01] Checking for apptainer binary...
[2025-11-23 00:02:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:02:01] Running /usr/bin/apptainer --version
[2025-11-23 00:02:01] apptainer version 1.4.4-1.el9
[2025-11-23 00:02:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:02:02] lc-12-9.aglt2.org
[2025-11-23 00:02:02] apptainer works
[2025-11-23 00:02:02] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:02:02] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:02:02] Starting ATLAS job with PandaID=6895329004
[2025-11-23 00:02:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:43:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:43:57] 2025-11-24 11:43:16,620 | INFO     | time since job start (110414s) is within the limit (172800.0s)
[2025-11-24 06:43:57] 2025-11-24 11:43:18,627 | INFO     | time since job start (110416s) is within the limit (172800.0s)
[2025-11-24 06:43:57] 2025-11-24 11:43:19,035 | INFO     | monitor loop #5185: job 0:6895329004 is in state 'finished'
[2025-11-24 06:43:57] 2025-11-24 11:43:19,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:43:57] 2025-11-24 11:43:20,634 | INFO     | time since job start (110418s) is within the limit (172800.0s)
[2025-11-24 06:43:57] 2025-11-24 11:43:21,548 | INFO     | monitor loop #5186: job 0:6895329004 is in state 'finished'
[2025-11-24 06:43:57] 2025-11-24 11:43:21,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:43:57] 2025-11-24 11:43:22,641 | INFO     | time since job start (110420s) is within the limit (172800.0s)
[2025-11-24 06:43:57] 2025-11-24 11:43:23,801 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 06:43:57] 2025-11-24 11:43:23,812 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2699.9983333333325
[2025-11-24 06:43:57] 2025-11-24 11:43:23,873 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6895329004/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 06:43:57] 2025-11-24 11:43:23,874 | INFO     | extracted standard info from prmon json
[2025-11-24 06:43:57] 2025-11-24 11:43:23,874 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 06:43:57] 2025-11-24 11:43:23,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 06:43:57] 2025-11-24 11:43:23,904 | INFO     | fitting pss+swap vs Time
[2025-11-24 06:43:57] 2025-11-24 11:43:23,906 | INFO     | sum of square deviations: 1832533082285.0515
[2025-11-24 06:43:57] 2025-11-24 11:43:23,984 | INFO     | sum of deviations: 8730253139622.9375
[2025-11-24 06:43:57] 2025-11-24 11:43:23,984 | INFO     | mean x: 1763929464.4153762
[2025-11-24 06:43:57] 2025-11-24 11:43:23,984 | INFO     | mean y: 3007037.4994469024
[2025-11-24 06:43:57] 2025-11-24 11:43:23,984 | INFO     | intersect: -8400416013.168478
[2025-11-24 06:43:57] 2025-11-24 11:43:23,986 | INFO     | chi2: 14.481942038814038
[2025-11-24 06:43:57] 2025-11-24 11:43:23,988 | INFO     | sum of square deviations: 1817372947713.1885
[2025-11-24 06:43:57] 2025-11-24 11:43:24,047 | INFO     | sum of deviations: 9400117057623.9
[2025-11-24 06:43:57] 2025-11-24 11:43:24,047 | INFO     | mean x: 1763929311.926234
[2025-11-24 06:43:57] 2025-11-24 11:43:24,048 | INFO     | mean y: 3013775.044370494
[2025-11-24 06:43:57] 2025-11-24 11:43:24,048 | INFO     | intersect: -9120673266.927248
[2025-11-24 06:43:57] 2025-11-24 11:43:24,050 | INFO     | chi2: 11.033798477462716
[2025-11-24 06:43:57] 2025-11-24 11:43:24,050 | INFO     | current chi2=11.033798477462716 (change=23.8099527819523 %)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,050 | INFO     | right removable region: 1802
[2025-11-24 06:43:57] 2025-11-24 11:43:24,052 | INFO     | sum of square deviations: 1817368629523.1873
[2025-11-24 06:43:57] 2025-11-24 11:43:24,058 | INFO     | monitor loop #5187: job 0:6895329004 is in state 'finished'
[2025-11-24 06:43:57] 2025-11-24 11:43:24,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,113 | INFO     | sum of deviations: 7991874797232.135
[2025-11-24 06:43:57] 2025-11-24 11:43:24,114 | INFO     | mean x: 1763929616.926234
[2025-11-24 06:43:57] 2025-11-24 11:43:24,114 | INFO     | mean y: 3014462.872989462
[2025-11-24 06:43:57] 2025-11-24 11:43:24,114 | INFO     | intersect: -7753862386.763554
[2025-11-24 06:43:57] 2025-11-24 11:43:24,116 | INFO     | chi2: 10.522714460746116
[2025-11-24 06:43:57] 2025-11-24 11:43:24,116 | INFO     | current chi2=10.522714460746116 (change=27.3390652127769 %)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,118 | INFO     | sum of square deviations: 1802288038798.3967
[2025-11-24 06:43:57] 2025-11-24 11:43:24,180 | INFO     | sum of deviations: 7386337534672.597
[2025-11-24 06:43:57] 2025-11-24 11:43:24,181 | INFO     | mean x: 1763929769.4371524
[2025-11-24 06:43:57] 2025-11-24 11:43:24,181 | INFO     | mean y: 3020585.461067853
[2025-11-24 06:43:57] 2025-11-24 11:43:24,181 | INFO     | intersect: -7226112818.324139
[2025-11-24 06:43:57] 2025-11-24 11:43:24,183 | INFO     | chi2: 7.965651746634297
[2025-11-24 06:43:57] 2025-11-24 11:43:24,183 | INFO     | current chi2=7.965651746634297 (change=24.300409591561888 %)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,183 | INFO     | left removable region: 20
[2025-11-24 06:43:57] 2025-11-24 11:43:24,185 | INFO     | sum of square deviations: 1754597591337.3416
[2025-11-24 06:43:57] 2025-11-24 11:43:24,247 | INFO     | sum of deviations: 7489275179638.374
[2025-11-24 06:43:57] 2025-11-24 11:43:24,247 | INFO     | mean x: 1763929891.4652076
[2025-11-24 06:43:57] 2025-11-24 11:43:24,247 | INFO     | mean y: 3036472.1913580247
[2025-11-24 06:43:57] 2025-11-24 11:43:24,248 | INFO     | intersect: -7526072435.739834
[2025-11-24 06:43:57] 2025-11-24 11:43:24,250 | INFO     | chi2: 1.6819601297788775
[2025-11-24 06:43:57] 2025-11-24 11:43:24,250 | INFO     | current memory leak: 4.27 B/s (using 1782 data points, chi2=1.68)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,251 | INFO     | could have reported an average CPU frequency of 2701 MHz (63 samples)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | ..............................
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . Timing measurements:
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . get job = 0 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . initial setup = 4 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . payload setup = 73 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . stage-in = 0 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . payload execution = 110254 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . stage-out = 5 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | . log creation = 1 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,252 | INFO     | ..............................
[2025-11-24 06:43:57] 2025-11-24 11:43:24,349 | INFO     | 
[2025-11-24 06:43:57] 2025-11-24 11:43:24,349 | INFO     | job summary report
[2025-11-24 06:43:57] 2025-11-24 11:43:24,349 | INFO     | --------------------------------------------------
[2025-11-24 06:43:57] 2025-11-24 11:43:24,349 | INFO     | PanDA job id: 6895329004
[2025-11-24 06:43:57] 2025-11-24 11:43:24,349 | INFO     | task id: 47556149
[2025-11-24 06:43:57] 2025-11-24 11:43:24,349 | INFO     | errors: (none)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | pilot state: finished 
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | transexitcode: 0
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | exeerrorcode: 0
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | exeerrordiag: 
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | exitcode: 0
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | exitmsg: OK
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | cpuconsumptiontime: 267368 s
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | nevents: 1000
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | neventsw: 0
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | pid: 2676705
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | pgrp: 2676705
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | corecount: 9
[2025-11-24 06:43:57] 2025-11-24 11:43:24,350 | INFO     | event service: False
[2025-11-24 06:43:57] 2025-11-24 11:43:24,351 | INFO     | sizes: {0: 2298583, 1: 2298782, 2: 2298782, 13: 2298810, 23: 2298866, 30: 2299156, 34: 2299312, 110332: 2372868, 110339: 2382653, 110342: 2382709, 110357: 2382955}
[2025-11-24 06:43:57] 2025-11-24 11:43:24,351 | INFO     | --------------------------------------------------
[2025-11-24 06:43:57] 2025-11-24 11:43:24,351 | INFO     | 
[2025-11-24 06:43:57] 2025-11-24 11:43:24,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-24 06:43:57] 2025-11-24 11:43:24,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:43:57] 2025-11-24 11:43:24,372 | INFO     | job 6895329004 has completed (purged errors)
[2025-11-24 06:43:57] 2025-11-24 11:43:24,372 | INFO     | overall cleanup function is called
[2025-11-24 06:43:57] 2025-11-24 11:43:25,394 | INFO     | --- collectZombieJob: --- 10, [2676705]
[2025-11-24 06:43:57] 2025-11-24 11:43:25,395 | INFO     | zombie collector waiting for pid 2676705
[2025-11-24 06:43:57] 2025-11-24 11:43:25,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:43:57] 2025-11-24 11:43:25,395 | INFO     | collected zombie processes
[2025-11-24 06:43:57] 2025-11-24 11:43:25,395 | INFO     | will attempt to kill all subprocesses of pid=2676705
[2025-11-24 06:43:57] 2025-11-24 11:43:26,165 | INFO     | process IDs to be killed: [2676705] (in reverse order)
[2025-11-24 06:43:57] 2025-11-24 11:43:26,393 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:43:57] 2025-11-24 11:43:26,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:43:57] 2025-11-24 11:43:26,423 | INFO     | did not find any defunct processes belonging to 2676705
[2025-11-24 06:43:57] 2025-11-24 11:43:26,450 | INFO     | did not find any defunct processes belonging to 2676705
[2025-11-24 06:43:57] 2025-11-24 11:43:26,451 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:43:57] 2025-11-24 11:43:26,452 | INFO     | ready for new job
[2025-11-24 06:43:57] 2025-11-24 11:43:26,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:43:57] 2025-11-24 11:43:26,457 | INFO     | ***************************************
[2025-11-24 06:43:57] 2025-11-24 11:43:26,457 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:43:57] 2025-11-24 11:43:26,457 | INFO     | ***************************************
[2025-11-24 06:43:57] 2025-11-24 11:43:26,458 | INFO     | 
[2025-11-24 06:43:57] 2025-11-24 11:43:26,463 | INFO     | architecture information:
[2025-11-24 06:43:57] 2025-11-24 11:43:26,463 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:43:57] 2025-11-24 11:43:26,485 | INFO     | cat /etc/os-release:
[2025-11-24 06:43:57] NAME="CentOS Linux"
[2025-11-24 06:43:57] VERSION="7 (Core)"
[2025-11-24 06:43:57] ID="centos"
[2025-11-24 06:43:57] ID_LIKE="rhel fedora"
[2025-11-24 06:43:57] VERSION_ID="7"
[2025-11-24 06:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:43:57] ANSI_COLOR="0;31"
[2025-11-24 06:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:43:57] HOME_URL="https://www.centos.org/"
[2025-11-24 06:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:43:57] 
[2025-11-24 06:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:43:57] 
[2025-11-24 06:43:57] 2025-11-24 11:43:26,487 | INFO     | ***************************************
[2025-11-24 06:43:57] 2025-11-24 11:43:26,992 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-24 06:43:57] 2025-11-24 11:43:27,029 | INFO     | sufficient remaining disk space (414995972096 B)
[2025-11-24 06:43:57] 2025-11-24 11:43:27,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:43:57] 2025-11-24 11:43:27,030 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:43:57] 2025-11-24 11:43:27,030 | INFO     | update_server=False
[2025-11-24 06:43:57] 2025-11-24 11:43:27,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:43:57] 2025-11-24 11:43:27,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:43:57] 2025-11-24 11:43:27,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:43:57] 2025-11-24 11:43:27,569 | INFO     | aborting loop
[2025-11-24 06:43:57] 2025-11-24 11:43:28,015 | INFO     | all data control threads have been joined
[2025-11-24 06:43:57] 2025-11-24 11:43:28,038 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:28,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:43:57] 2025-11-24 11:43:28,255 | INFO     | all payload control threads have been joined
[2025-11-24 06:43:57] 2025-11-24 11:43:28,274 | INFO     | [job] validate thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:28,355 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:28,457 | INFO     | all job control threads have been joined
[2025-11-24 06:43:57] 2025-11-24 11:43:28,545 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:28,550 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:28,576 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:28,785 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,024 | INFO     | [data] control thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,041 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,262 | INFO     | [payload] control thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,356 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:43:57] 2025-11-24 11:43:29,446 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:29,464 | INFO     | [job] control thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:30,386 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:32,206 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:43:57] 2025-11-24 11:43:33,694 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:43:57] 2025-11-24 11:43:35,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268452362048)>', '<ExcThread(monitor, started 140267659196160)>']
[2025-11-24 06:43:57] 2025-11-24 11:43:40,372 | INFO     | all workflow threads have been joined
[2025-11-24 06:43:57] 2025-11-24 11:43:40,372 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:43:57] 2025-11-24 11:43:40,372 | INFO     | traces error code: 0
[2025-11-24 06:43:57] 2025-11-24 11:43:40,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:43:57] 2025-11-24 11:43:56,592 | INFO     | PID=2617445 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 06:43:57] 2025-11-24 11:43:56,593 | INFO     | .. there are 82 such processes running
[2025-11-24 06:43:57] 2025-11-24 11:43:56,594 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:43:57] 2025-11-24 11:43:56,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:43:57] 2025-11-24 11:43:56,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:43:57] 2025-11-24 11:43:56,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:43:57] 2025-11-24 11:43:56,594 | INFO     | [monitor] control thread has ended
[2025-11-24 06:43:57] 2025-11-24 11:43:56,781 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:43:57] 2025-11-24 11:43:56,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:43:57] 2025-11-24 11:43:56,806 [wrapper] pilotpid: 2617445
[2025-11-24 06:43:57] 2025-11-24 11:43:56,808 [wrapper] Pilot exit status: 0
[2025-11-24 06:43:57] 2025-11-24 11:43:56,838 [wrapper] pandaids: 6895329004
[2025-11-24 06:43:57] 2025-11-24 11:43:56,991 [wrapper] cleanup supervisor_pilot 3831044 2617446
[2025-11-24 06:43:57] 2025-11-24 11:43:56,997 [wrapper] Test setup, not cleaning
[2025-11-24 06:43:57] 2025-11-24 11:43:57,001 [wrapper] apfmon messages muted
[2025-11-24 06:43:57] 2025-11-24 11:43:57,005 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:43:57] 2025-11-24 11:43:57,007 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:43:57]  *** Error codes and diagnostics ***
[2025-11-24 06:43:57]     "exeErrorCode": 0,
[2025-11-24 06:43:57]     "exeErrorDiag": "",
[2025-11-24 06:43:57]     "pilotErrorCode": 0,
[2025-11-24 06:43:57]     "pilotErrorDiag": "",
[2025-11-24 06:43:57]  *** Listing of results directory ***
[2025-11-24 06:43:57] total 1332076
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 13:11 pilot3.tar.gz
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 13:27 queuedata.json
[2025-11-24 06:43:57] -rwx------. 1 boincer umatlas     36292 Nov 21 13:29 runpilot2-wrapper.sh
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:43:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:01 run_atlas
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:01 job.xml
[2025-11-24 06:43:57] -rw-r--r--. 2 boincer umatlas 411137868 Nov 23 00:01 EVNT.47483658._001034.pool.root.1
[2025-11-24 06:43:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:01 start_atlas.sh
[2025-11-24 06:43:57] drwxrwx--x. 2 boincer umatlas        68 Nov 23 00:01 shared
[2025-11-24 06:43:57] -rw-r--r--. 2 boincer umatlas    590105 Nov 23 00:01 input.tar.gz
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:01 boinc_lockfile
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:02 pandaJob.out
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas    989784 Nov 23 00:02 agis_schedconf.cvmfs.json
[2025-11-24 06:43:57] drwx------. 5 boincer umatlas      4096 Nov 23 00:03 pilot3
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas       533 Nov 24 06:30 boinc_task_state.xml
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas      6800 Nov 24 06:36 init_data.xml
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas 919411731 Nov 24 06:42 HITS.47556149._000210.pool.root.1
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas      1065 Nov 24 06:42 memory_monitor_summary.json
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas   1516227 Nov 24 06:43 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas   2729160 Nov 24 06:43 log.47556149._000210.job.log.tgz.1
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas      8629 Nov 24 06:43 heartbeat.json
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 06:43 boinc_mmap_file
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas        29 Nov 24 06:43 wrapper_checkpoint.txt
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas        95 Nov 24 06:43 pilot_heartbeat.json
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas       823 Nov 24 06:43 pilotlog.txt
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas  12068960 Nov 24 06:43 log.47556149._000210.job.log.1
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas       353 Nov 24 06:43 output.list
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas       620 Nov 24 06:43 runtime_log
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas  14817280 Nov 24 06:43 result.tar.gz
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas      8814 Nov 24 06:43 runtime_log.err
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas       663 Nov 24 06:43 4E0MDml3kg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEdJKDmfRjNPm.diag
[2025-11-24 06:43:57] -rw-r--r--. 1 boincer umatlas     21600 Nov 24 06:43 stderr.txt
[2025-11-24 06:43:57] HITS file was successfully produced:
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas 919411731 Nov 24 06:42 shared/HITS.pool.root.1
[2025-11-24 06:43:57]  *** Contents of shared directory: ***
[2025-11-24 06:43:57] total 1314436
[2025-11-24 06:43:57] -rw-r--r--. 2 boincer umatlas 411137868 Nov 23 00:01 ATLAS.root_0
[2025-11-24 06:43:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:01 start_atlas.sh
[2025-11-24 06:43:57] -rw-r--r--. 2 boincer umatlas    590105 Nov 23 00:01 input.tar.gz
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas 919411731 Nov 24 06:42 HITS.pool.root.1
[2025-11-24 06:43:57] -rw-------. 1 boincer umatlas  14817280 Nov 24 06:43 result.tar.gz
06:43:58 (2593483): run_atlas exited; CPU time 272935.736333
06:43:58 (2593483): called boinc_finish(0)

</stderr_txt>
]]>

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