Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:34 (809475): wrapper (7.7.26015): starting
00:02:34 (809475): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:02:34] Arguments: --nthreads 9
[2025-11-24 00:02:34] Threads: 9
[2025-11-24 00:02:34] Checking for CVMFS
[2025-11-24 00:02:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:36] 2.13.3.0 9890 26590 342060 153233 2 547 32880482 32935936 22708 16776704 0 161165620 99.796 84907251 34757 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:02:36] CVMFS is ok
[2025-11-24 00:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:36] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:36] Checking for apptainer binary...
[2025-11-24 00:02:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:36] Running /usr/bin/apptainer --version
[2025-11-24 00:02:36] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:36] c-8-36.aglt2.org
[2025-11-24 00:02:36] apptainer works
[2025-11-24 00:02:36] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:02:36] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:02:36] Starting ATLAS job with PandaID=6894278622
[2025-11-24 00:02:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:39:53]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:39:53] 2025-11-25 07:39:17,772 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 02:39:53] 2025-11-25 07:39:17,790 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.18925
[2025-11-25 02:39:53] 2025-11-25 07:39:17,822 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894278622/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:39:53] 2025-11-25 07:39:17,823 | INFO     | extracted standard info from prmon json
[2025-11-25 02:39:53] 2025-11-25 07:39:17,823 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:39:53] 2025-11-25 07:39:17,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:39:53] 2025-11-25 07:39:17,897 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:39:53] 2025-11-25 07:39:17,904 | INFO     | sum of square deviations: 1197717193970.719
[2025-11-25 02:39:53] 2025-11-25 07:39:18,025 | INFO     | sum of deviations: 8016646558382.696
[2025-11-25 02:39:53] 2025-11-25 07:39:18,030 | INFO     | mean x: 1764008456.0809433
[2025-11-25 02:39:53] 2025-11-25 07:39:18,030 | INFO     | mean y: 3089428.136392607
[2025-11-25 02:39:53] 2025-11-25 07:39:18,030 | INFO     | intersect: -11803898389.678127
[2025-11-25 02:39:53] 2025-11-25 07:39:18,032 | INFO     | chi2: 9.816834375052082
[2025-11-25 02:39:53] 2025-11-25 07:39:18,039 | INFO     | sum of square deviations: 1186303897239.859
[2025-11-25 02:39:53] 2025-11-25 07:39:18,261 | INFO     | sum of deviations: 8590106803108.285
[2025-11-25 02:39:53] 2025-11-25 07:39:18,261 | INFO     | mean x: 1764008303.584399
[2025-11-25 02:39:53] 2025-11-25 07:39:18,261 | INFO     | mean y: 3097091.4789002556
[2025-11-25 02:39:53] 2025-11-25 07:39:18,261 | INFO     | intersect: -12770206414.15399
[2025-11-25 02:39:53] 2025-11-25 07:39:18,272 | INFO     | chi2: 6.557177276634946
[2025-11-25 02:39:53] 2025-11-25 07:39:18,272 | INFO     | current chi2=6.557177276634946 (change=33.20476819595769 %)
[2025-11-25 02:39:53] 2025-11-25 07:39:18,281 | INFO     | sum of square deviations: 1174963155619.309
[2025-11-25 02:39:53] 2025-11-25 07:39:18,464 | INFO     | sum of deviations: 8796219229967.197
[2025-11-25 02:39:53] 2025-11-25 07:39:18,465 | INFO     | mean x: 1764008151.0865939
[2025-11-25 02:39:53] 2025-11-25 07:39:18,465 | INFO     | mean y: 3099861.946760744
[2025-11-25 02:39:53] 2025-11-25 07:39:18,465 | INFO     | intersect: -13202933319.77302
[2025-11-25 02:39:53] 2025-11-25 07:39:18,467 | INFO     | chi2: 5.915349177937656
[2025-11-25 02:39:53] 2025-11-25 07:39:18,467 | INFO     | current chi2=5.915349177937656 (change=9.78817670500237 %)
[2025-11-25 02:39:53] 2025-11-25 07:39:18,467 | INFO     | right removable region: 1558
[2025-11-25 02:39:53] 2025-11-25 07:39:18,482 | INFO     | sum of square deviations: 1186302862679.8591
[2025-11-25 02:39:53] 2025-11-25 07:39:18,645 | INFO     | time since job start (95781s) is within the limit (172800.0s)
[2025-11-25 02:39:53] 2025-11-25 07:39:18,660 | INFO     | sum of deviations: 7412332449671.719
[2025-11-25 02:39:53] 2025-11-25 07:39:18,660 | INFO     | mean x: 1764008608.584399
[2025-11-25 02:39:53] 2025-11-25 07:39:18,660 | INFO     | mean y: 3097500.4718670077
[2025-11-25 02:39:53] 2025-11-25 07:39:18,660 | INFO     | intersect: -11018892467.058868
[2025-11-25 02:39:53] 2025-11-25 07:39:18,671 | INFO     | chi2: 6.57339076773558
[2025-11-25 02:39:53] 2025-11-25 07:39:18,671 | INFO     | current chi2=6.57339076773558 (change=33.03960812010027 %)
[2025-11-25 02:39:53] 2025-11-25 07:39:18,680 | INFO     | sum of square deviations: 1174961276938.9602
[2025-11-25 02:39:53] 2025-11-25 07:39:18,866 | INFO     | sum of deviations: 6984212679558.849
[2025-11-25 02:39:53] 2025-11-25 07:39:18,866 | INFO     | mean x: 1764008761.0878768
[2025-11-25 02:39:53] 2025-11-25 07:39:18,866 | INFO     | mean y: 3103256.7748556766
[2025-11-25 02:39:53] 2025-11-25 07:39:18,866 | INFO     | intersect: -10482529417.128904
[2025-11-25 02:39:53] 2025-11-25 07:39:18,877 | INFO     | chi2: 5.161568526587618
[2025-11-25 02:39:53] 2025-11-25 07:39:18,877 | INFO     | current chi2=5.161568526587618 (change=21.477838318659863 %)
[2025-11-25 02:39:53] 2025-11-25 07:39:18,877 | INFO     | left removable region: 20
[2025-11-25 02:39:53] 2025-11-25 07:39:18,886 | INFO     | sum of square deviations: 1128118594448.6409
[2025-11-25 02:39:53] 2025-11-25 07:39:19,056 | INFO     | sum of deviations: 7426762151164.861
[2025-11-25 02:39:53] 2025-11-25 07:39:19,057 | INFO     | mean x: 1764008730.5949285
[2025-11-25 02:39:53] 2025-11-25 07:39:19,065 | INFO     | mean y: 3118998.2373211966
[2025-11-25 02:39:53] 2025-11-25 07:39:19,065 | INFO     | intersect: -11609909400.704845
[2025-11-25 02:39:53] 2025-11-25 07:39:19,067 | INFO     | chi2: 0.9519214200880681
[2025-11-25 02:39:53] 2025-11-25 07:39:19,068 | INFO     | current memory leak: 6.58 B/s (using 1538 data points, chi2=0.95)
[2025-11-25 02:39:53] 2025-11-25 07:39:19,082 | INFO     | could have reported an average CPU frequency of 2600 MHz (56 samples)
[2025-11-25 02:39:53] 2025-11-25 07:39:19,082 | INFO     | ..............................
[2025-11-25 02:39:53] 2025-11-25 07:39:19,082 | INFO     | . Timing measurements:
[2025-11-25 02:39:53] 2025-11-25 07:39:19,082 | INFO     | . get job = 0 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,082 | INFO     | . initial setup = 2 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,082 | INFO     | . payload setup = 19 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,083 | INFO     | . stage-in = 0 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,083 | INFO     | . payload execution = 95721 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,083 | INFO     | . stage-out = 6 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,083 | INFO     | . log creation = 1 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,083 | INFO     | ..............................
[2025-11-25 02:39:53] 2025-11-25 07:39:19,726 | INFO     | 
[2025-11-25 02:39:53] 2025-11-25 07:39:19,729 | INFO     | job summary report
[2025-11-25 02:39:53] 2025-11-25 07:39:19,729 | INFO     | --------------------------------------------------
[2025-11-25 02:39:53] 2025-11-25 07:39:19,729 | INFO     | PanDA job id: 6894278622
[2025-11-25 02:39:53] 2025-11-25 07:39:19,729 | INFO     | task id: 47533967
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | errors: (none)
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | pilot state: finished 
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | transexitcode: 0
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | exeerrorcode: 0
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | exeerrordiag: 
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | exitcode: 0
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | exitmsg: OK
[2025-11-25 02:39:53] 2025-11-25 07:39:19,730 | INFO     | cpuconsumptiontime: 306385 s
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | nevents: 1000
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | neventsw: 0
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | pid: 827872
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | pgrp: 827872
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | corecount: 9
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | event service: False
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | sizes: {0: 2298579, 1: 2298834, 2: 2298834, 9: 2299124, 12: 2299152, 95745: 2369427, 95752: 2379268, 95762: 2379486}
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | --------------------------------------------------
[2025-11-25 02:39:53] 2025-11-25 07:39:19,731 | INFO     | 
[2025-11-25 02:39:53] 2025-11-25 07:39:19,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 02:39:53] 2025-11-25 07:39:19,782 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:39:53] 2025-11-25 07:39:19,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,785 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:39:53] 2025-11-25 07:39:19,789 | INFO     | job 6894278622 has completed (purged errors)
[2025-11-25 02:39:53] 2025-11-25 07:39:19,789 | INFO     | overall cleanup function is called
[2025-11-25 02:39:53] 2025-11-25 07:39:20,815 | INFO     | --- collectZombieJob: --- 10, [827872]
[2025-11-25 02:39:53] 2025-11-25 07:39:20,815 | INFO     | zombie collector waiting for pid 827872
[2025-11-25 02:39:53] 2025-11-25 07:39:20,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:39:53] 2025-11-25 07:39:20,815 | INFO     | collected zombie processes
[2025-11-25 02:39:53] 2025-11-25 07:39:20,816 | INFO     | will attempt to kill all subprocesses of pid=827872
[2025-11-25 02:39:53] 2025-11-25 07:39:21,583 | INFO     | process IDs to be killed: [827872] (in reverse order)
[2025-11-25 02:39:53] 2025-11-25 07:39:21,732 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:39:53] 2025-11-25 07:39:21,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:39:53] 2025-11-25 07:39:21,750 | INFO     | did not find any defunct processes belonging to 827872
[2025-11-25 02:39:53] 2025-11-25 07:39:21,768 | INFO     | did not find any defunct processes belonging to 827872
[2025-11-25 02:39:53] 2025-11-25 07:39:21,769 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:39:53] 2025-11-25 07:39:21,769 | INFO     | ready for new job
[2025-11-25 02:39:53] 2025-11-25 07:39:21,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:39:53] 2025-11-25 07:39:21,777 | INFO     | ***************************************
[2025-11-25 02:39:53] 2025-11-25 07:39:21,777 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:39:53] 2025-11-25 07:39:21,777 | INFO     | ***************************************
[2025-11-25 02:39:53] 2025-11-25 07:39:21,777 | INFO     | 
[2025-11-25 02:39:53] 2025-11-25 07:39:21,779 | INFO     | architecture information:
[2025-11-25 02:39:53] 2025-11-25 07:39:21,780 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:39:53] 2025-11-25 07:39:21,797 | INFO     | cat /etc/os-release:
[2025-11-25 02:39:53] NAME="CentOS Linux"
[2025-11-25 02:39:53] VERSION="7 (Core)"
[2025-11-25 02:39:53] ID="centos"
[2025-11-25 02:39:53] ID_LIKE="rhel fedora"
[2025-11-25 02:39:53] VERSION_ID="7"
[2025-11-25 02:39:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:39:53] ANSI_COLOR="0;31"
[2025-11-25 02:39:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:39:53] HOME_URL="https://www.centos.org/"
[2025-11-25 02:39:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:39:53] 
[2025-11-25 02:39:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:39:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:39:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:39:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:39:53] 
[2025-11-25 02:39:53] 2025-11-25 07:39:21,798 | INFO     | ***************************************
[2025-11-25 02:39:53] 2025-11-25 07:39:22,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 02:39:53] 2025-11-25 07:39:22,324 | INFO     | sufficient remaining disk space (72700919808 B)
[2025-11-25 02:39:53] 2025-11-25 07:39:22,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:39:53] 2025-11-25 07:39:22,325 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:39:53] 2025-11-25 07:39:22,325 | INFO     | update_server=False
[2025-11-25 02:39:53] 2025-11-25 07:39:22,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:39:53] 2025-11-25 07:39:22,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:39:53] 2025-11-25 07:39:22,537 | INFO     | all payload control threads have been joined
[2025-11-25 02:39:53] 2025-11-25 07:39:22,778 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 02:39:53] 2025-11-25 07:39:22,778 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 02:39:53] 2025-11-25 07:39:22,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:39:53] 2025-11-25 07:39:22,779 | INFO     | will abort loop
[2025-11-25 02:39:53] 2025-11-25 07:39:23,330 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:23,401 | INFO     | all data control threads have been joined
[2025-11-25 02:39:53] 2025-11-25 07:39:23,552 | INFO     | [payload] control thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:23,784 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:23,797 | INFO     | [job] validate thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:23,845 | INFO     | all job control threads have been joined
[2025-11-25 02:39:53] 2025-11-25 07:39:24,055 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:39:53] 2025-11-25 07:39:24,245 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,246 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,307 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,369 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,407 | INFO     | [data] control thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:39:53] 2025-11-25 07:39:24,448 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,821 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:24,851 | INFO     | [job] control thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:25,424 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:28,232 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:39:53] 2025-11-25 07:39:46,355 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:39:53] 2025-11-25 07:39:48,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172061022016)>', '<ExcThread(monitor, started 140171710273280)>']
[2025-11-25 02:39:53] 2025-11-25 07:39:52,372 | INFO     | PID=813706 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 02:39:53] 2025-11-25 07:39:52,372 | INFO     | .. there are 42 such processes running
[2025-11-25 02:39:53] 2025-11-25 07:39:52,373 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:39:53] 2025-11-25 07:39:52,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:39:53] 2025-11-25 07:39:52,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:39:53] 2025-11-25 07:39:52,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:39:53] 2025-11-25 07:39:52,373 | INFO     | [monitor] control thread has ended
[2025-11-25 02:39:53] 2025-11-25 07:39:53,323 | INFO     | all workflow threads have been joined
[2025-11-25 02:39:53] 2025-11-25 07:39:53,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:39:53] 2025-11-25 07:39:53,324 | INFO     | traces error code: 0
[2025-11-25 02:39:53] 2025-11-25 07:39:53,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:39:53] 2025-11-25 07:39:53,523 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:39:53] 2025-11-25 07:39:53,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:39:53] 2025-11-25 07:39:53,528 [wrapper] pilotpid: 813706
[2025-11-25 02:39:53] 2025-11-25 07:39:53,531 [wrapper] Pilot exit status: 0
[2025-11-25 02:39:53] 2025-11-25 07:39:53,544 [wrapper] pandaids: 6894278622
[2025-11-25 02:39:53] 2025-11-25 07:39:53,634 [wrapper] cleanup supervisor_pilot 2678896 813707
[2025-11-25 02:39:53] 2025-11-25 07:39:53,641 [wrapper] Test setup, not cleaning
[2025-11-25 02:39:53] 2025-11-25 07:39:53,648 [wrapper] apfmon messages muted
[2025-11-25 02:39:53] 2025-11-25 07:39:53,651 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:39:53] 2025-11-25 07:39:53,654 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:39:53]  *** Error codes and diagnostics ***
[2025-11-25 02:39:53]     "exeErrorCode": 0,
[2025-11-25 02:39:53]     "exeErrorDiag": "",
[2025-11-25 02:39:53]     "pilotErrorCode": 0,
[2025-11-25 02:39:53]     "pilotErrorDiag": "",
[2025-11-25 02:39:53]  *** Listing of results directory ***
[2025-11-25 02:39:53] total 1325312
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 02:49 pilot3.tar.gz
[2025-11-25 02:39:53] -rwx------. 1 boincer umatlas     36292 Nov 21 03:15 runpilot2-wrapper.sh
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 03:15 queuedata.json
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:39:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-25 02:39:53] -rw-r--r--. 2 boincer umatlas 408652949 Nov 24 00:02 EVNT.47493127._002323.pool.root.1
[2025-11-25 02:39:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-25 02:39:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-25 02:39:53] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 00:02 input.tar.gz
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:02 pandaJob.out
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas        57 Nov 24 00:02 setup.sh.local
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-25 02:39:53] drwx------. 5 boincer umatlas      4096 Nov 24 00:02 pilot3
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas       532 Nov 25 02:26 boinc_task_state.xml
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 02:36 init_data.xml
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas 914181477 Nov 25 02:38 HITS.47533967._002942.pool.root.1
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas      1066 Nov 25 02:38 memory_monitor_summary.json
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas   1516227 Nov 25 02:39 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas   2713686 Nov 25 02:39 log.47533967._002942.job.log.tgz.1
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas        95 Nov 25 02:39 pilot_heartbeat.json
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas      8651 Nov 25 02:39 heartbeat.json
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 02:39 boinc_mmap_file
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas      5009 Nov 25 02:39 pilotlog.txt
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas  12471013 Nov 25 02:39 log.47533967._002942.job.log.1
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas       353 Nov 25 02:39 output.list
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas        29 Nov 25 02:39 wrapper_checkpoint.txt
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas       620 Nov 25 02:39 runtime_log
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas  15206400 Nov 25 02:39 result.tar.gz
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 02:39 runtime_log.err
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas       662 Nov 25 02:39 hRhNDmWTbg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5SHKDmGzbhRm.diag
[2025-11-25 02:39:53] -rw-r--r--. 1 boincer umatlas     21282 Nov 25 02:39 stderr.txt
[2025-11-25 02:39:53] HITS file was successfully produced:
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas 914181477 Nov 25 02:38 shared/HITS.pool.root.1
[2025-11-25 02:39:53]  *** Contents of shared directory: ***
[2025-11-25 02:39:53] total 1307284
[2025-11-25 02:39:53] -rw-r--r--. 2 boincer umatlas 408652949 Nov 24 00:02 ATLAS.root_0
[2025-11-25 02:39:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-25 02:39:53] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 00:02 input.tar.gz
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas 914181477 Nov 25 02:38 HITS.pool.root.1
[2025-11-25 02:39:53] -rw-------. 1 boincer umatlas  15206400 Nov 25 02:39 result.tar.gz
02:40:15 (809475): run_atlas exited; CPU time 309045.499604
02:40:15 (809475): called boinc_finish(0)

</stderr_txt>
]]>

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