Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:42:55 (2403): wrapper (7.7.26015): starting
23:42:55 (2403): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:42:55] Arguments: --nthreads 8
[2025-11-22 23:42:55] Threads: 8
[2025-11-22 23:42:55] Checking for CVMFS
[2025-11-22 23:42:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:42:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:42:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:42:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:42:56] 2.11.2.0 2802 68514 80300 153197 3 81 12136727 20275201 1 130560 0 19349842 99.915 3339109 20797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 23:42:56] CVMFS is ok
[2025-11-22 23:42:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:42:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:42:56] Further information can be found at the LHC@home message board.
[2025-11-22 23:42:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:42:56] Checking for apptainer binary...
[2025-11-22 23:42:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:42:56] Running /usr/bin/apptainer --version
[2025-11-22 23:42:56] apptainer version 1.3.2-1.el7
[2025-11-22 23:42:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:42:57] c-204-8.aglt2.org
[2025-11-22 23:42:57] apptainer works
[2025-11-22 23:42:57] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:42:57] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:42:57] Starting ATLAS job with PandaID=6895336067
[2025-11-22 23:42:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:27:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:27:37] 2025-11-23 17:26:32,364 | INFO     | monitor loop #3360: job 0:6895336067 is in state 'finished'
[2025-11-23 12:27:37] 2025-11-23 17:26:32,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,774 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:27:37] 2025-11-23 17:26:32,778 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 12:27:37] 2025-11-23 17:26:32,780 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895336067/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,782 | INFO     | extracted standard info from prmon json
[2025-11-23 12:27:37] 2025-11-23 17:26:32,782 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:27:37] 2025-11-23 17:26:32,782 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:27:37] 2025-11-23 17:26:32,795 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:27:37] 2025-11-23 17:26:32,796 | INFO     | sum of square deviations: 131340539176.71379
[2025-11-23 12:27:37] 2025-11-23 17:26:32,807 | INFO     | sum of deviations: 817156767434.0042
[2025-11-23 12:27:37] 2025-11-23 17:26:32,808 | INFO     | mean x: 1763895902.5818908
[2025-11-23 12:27:37] 2025-11-23 17:26:32,808 | INFO     | mean y: 2873104.926764314
[2025-11-23 12:27:37] 2025-11-23 17:26:32,808 | INFO     | intersect: -10971495379.31237
[2025-11-23 12:27:37] 2025-11-23 17:26:32,809 | INFO     | chi2: 6.349360663103724
[2025-11-23 12:27:37] 2025-11-23 17:26:32,810 | INFO     | sum of square deviations: 128734791042.50957
[2025-11-23 12:27:37] 2025-11-23 17:26:32,821 | INFO     | sum of deviations: 1093482983419.5177
[2025-11-23 12:27:37] 2025-11-23 17:26:32,821 | INFO     | mean x: 1763895750.0857909
[2025-11-23 12:27:37] 2025-11-23 17:26:32,821 | INFO     | mean y: 2889278.4450402143
[2025-11-23 12:27:37] 2025-11-23 17:26:32,821 | INFO     | intersect: -14979773695.76146
[2025-11-23 12:27:37] 2025-11-23 17:26:32,822 | INFO     | chi2: 2.60583134706504
[2025-11-23 12:27:37] 2025-11-23 17:26:32,822 | INFO     | current chi2=2.60583134706504 (change=58.95915375846289 %)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,823 | INFO     | sum of square deviations: 126163695971.45949
[2025-11-23 12:27:37] 2025-11-23 17:26:32,834 | INFO     | sum of deviations: 1160942067278.894
[2025-11-23 12:27:37] 2025-11-23 17:26:32,835 | INFO     | mean x: 1763895597.5883942
[2025-11-23 12:27:37] 2025-11-23 17:26:32,835 | INFO     | mean y: 2893267.8947368423
[2025-11-23 12:27:37] 2025-11-23 17:26:32,835 | INFO     | intersect: -16228246647.280666
[2025-11-23 12:27:37] 2025-11-23 17:26:32,836 | INFO     | chi2: 2.164153414325127
[2025-11-23 12:27:37] 2025-11-23 17:26:32,836 | INFO     | current chi2=2.164153414325127 (change=16.949597802535344 %)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,836 | INFO     | right removable region: 740
[2025-11-23 12:27:37] 2025-11-23 17:26:32,837 | INFO     | sum of square deviations: 128734524472.50941
[2025-11-23 12:27:37] 2025-11-23 17:26:32,848 | INFO     | sum of deviations: 624814450039.366
[2025-11-23 12:27:37] 2025-11-23 17:26:32,849 | INFO     | mean x: 1763896055.0857909
[2025-11-23 12:27:37] 2025-11-23 17:26:32,849 | INFO     | mean y: 2884342.072386059
[2025-11-23 12:27:37] 2025-11-23 17:26:32,849 | INFO     | intersect: -8558204830.400418
[2025-11-23 12:27:37] 2025-11-23 17:26:32,850 | INFO     | chi2: 4.395762304015586
[2025-11-23 12:27:37] 2025-11-23 17:26:32,850 | INFO     | current chi2=4.395762304015586 (change=30.768426346301936 %)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,851 | INFO     | sum of square deviations: 126163344855.80853
[2025-11-23 12:27:37] 2025-11-23 17:26:32,862 | INFO     | sum of deviations: 578072500110.7078
[2025-11-23 12:27:37] 2025-11-23 17:26:32,862 | INFO     | mean x: 1763896207.585695
[2025-11-23 12:27:37] 2025-11-23 17:26:32,862 | INFO     | mean y: 2887113.5006747637
[2025-11-23 12:27:37] 2025-11-23 17:26:32,862 | INFO     | intersect: -8079174215.962514
[2025-11-23 12:27:37] 2025-11-23 17:26:32,863 | INFO     | chi2: 4.346492794837593
[2025-11-23 12:27:37] 2025-11-23 17:26:32,863 | INFO     | current chi2=4.346492794837593 (change=1.1208410685215038 %)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,863 | INFO     | left removable region: 20
[2025-11-23 12:27:37] 2025-11-23 17:26:32,864 | INFO     | sum of square deviations: 115738192980.76512
[2025-11-23 12:27:37] 2025-11-23 17:26:32,875 | INFO     | sum of deviations: 856603740605.1625
[2025-11-23 12:27:37] 2025-11-23 17:26:32,875 | INFO     | mean x: 1763896177.0930555
[2025-11-23 12:27:37] 2025-11-23 17:26:32,875 | INFO     | mean y: 2911416.952777778
[2025-11-23 12:27:37] 2025-11-23 17:26:32,875 | INFO     | intersect: -13052070904.98626
[2025-11-23 12:27:37] 2025-11-23 17:26:32,876 | INFO     | chi2: 0.1165616831441718
[2025-11-23 12:27:37] 2025-11-23 17:26:32,876 | INFO     | current memory leak: 7.40 B/s (using 720 data points, chi2=0.12)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | could have reported an average CPU frequency of 2157 MHz (29 samples)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | ..............................
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | . Timing measurements:
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | . get job = 0 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | . initial setup = 3 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | . payload setup = 8 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,877 | INFO     | . stage-in = 0 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,878 | INFO     | . payload execution = 45757 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,878 | INFO     | . stage-out = 3 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,878 | INFO     | . log creation = 0 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,878 | INFO     | ..............................
[2025-11-23 12:27:37] 2025-11-23 17:26:32,971 | INFO     | 
[2025-11-23 12:27:37] 2025-11-23 17:26:32,971 | INFO     | job summary report
[2025-11-23 12:27:37] 2025-11-23 17:26:32,971 | INFO     | --------------------------------------------------
[2025-11-23 12:27:37] 2025-11-23 17:26:32,971 | INFO     | PanDA job id: 6895336067
[2025-11-23 12:27:37] 2025-11-23 17:26:32,971 | INFO     | task id: 47556137
[2025-11-23 12:27:37] 2025-11-23 17:26:32,971 | INFO     | errors: (none)
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | pilot state: finished 
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | transexitcode: 0
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | exeerrorcode: 0
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | exeerrordiag: 
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | exitcode: 0
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | exitmsg: OK
[2025-11-23 12:27:37] 2025-11-23 17:26:32,972 | INFO     | cpuconsumptiontime: 353957 s
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | nevents: 1000
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | neventsw: 0
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | pid: 13676
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | pgrp: 13676
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | corecount: 8
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | event service: False
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | sizes: {0: 2298807, 6: 2299069, 11: 2299097, 45769: 2345298, 45773: 2354348, 45780: 2354566}
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | --------------------------------------------------
[2025-11-23 12:27:37] 2025-11-23 17:26:32,973 | INFO     | 
[2025-11-23 12:27:37] 2025-11-23 17:26:32,974 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:27:37] 2025-11-23 17:26:32,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,000 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:27:37] 2025-11-23 17:26:33,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:27:37] 2025-11-23 17:26:33,004 | INFO     | job 6895336067 has completed (purged errors)
[2025-11-23 12:27:37] 2025-11-23 17:26:33,004 | INFO     | overall cleanup function is called
[2025-11-23 12:27:37] 2025-11-23 17:26:34,018 | INFO     | --- collectZombieJob: --- 10, [13676]
[2025-11-23 12:27:37] 2025-11-23 17:26:34,018 | INFO     | zombie collector waiting for pid 13676
[2025-11-23 12:27:37] 2025-11-23 17:26:34,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:27:37] 2025-11-23 17:26:34,018 | INFO     | collected zombie processes
[2025-11-23 12:27:37] 2025-11-23 17:26:34,018 | INFO     | will attempt to kill all subprocesses of pid=13676
[2025-11-23 12:27:37] 2025-11-23 17:26:34,109 | INFO     | process IDs to be killed: [13676] (in reverse order)
[2025-11-23 12:27:37] 2025-11-23 17:26:34,165 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:27:37] 2025-11-23 17:26:34,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:27:37] 2025-11-23 17:26:34,170 | INFO     | did not find any defunct processes belonging to 13676
[2025-11-23 12:27:37] 2025-11-23 17:26:34,173 | INFO     | did not find any defunct processes belonging to 13676
[2025-11-23 12:27:37] 2025-11-23 17:26:34,176 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:27:37] 2025-11-23 17:26:34,176 | INFO     | ready for new job
[2025-11-23 12:27:37] 2025-11-23 17:26:34,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:27:37] 2025-11-23 17:26:34,180 | INFO     | ***************************************
[2025-11-23 12:27:37] 2025-11-23 17:26:34,180 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:27:37] 2025-11-23 17:26:34,180 | INFO     | ***************************************
[2025-11-23 12:27:37] 2025-11-23 17:26:34,181 | INFO     | 
[2025-11-23 12:27:37] 2025-11-23 17:26:34,181 | INFO     | architecture information:
[2025-11-23 12:27:37] 2025-11-23 17:26:34,182 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:27:37] 2025-11-23 17:26:34,200 | INFO     | cat /etc/os-release:
[2025-11-23 12:27:37] NAME="CentOS Linux"
[2025-11-23 12:27:37] VERSION="7 (Core)"
[2025-11-23 12:27:37] ID="centos"
[2025-11-23 12:27:37] ID_LIKE="rhel fedora"
[2025-11-23 12:27:37] VERSION_ID="7"
[2025-11-23 12:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:27:37] ANSI_COLOR="0;31"
[2025-11-23 12:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:27:37] HOME_URL="https://www.centos.org/"
[2025-11-23 12:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:27:37] 
[2025-11-23 12:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:27:37] 
[2025-11-23 12:27:37] 2025-11-23 17:26:34,201 | INFO     | ***************************************
[2025-11-23 12:27:37] 2025-11-23 17:26:34,704 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:27:37] 2025-11-23 17:26:34,724 | INFO     | sufficient remaining disk space (17472421888 B)
[2025-11-23 12:27:37] 2025-11-23 17:26:34,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:27:37] 2025-11-23 17:26:34,725 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:27:37] 2025-11-23 17:26:34,725 | INFO     | update_server=False
[2025-11-23 12:27:37] 2025-11-23 17:26:34,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:27:37] 2025-11-23 17:26:34,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:27:37] 2025-11-23 17:26:34,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:27:37] 2025-11-23 17:26:34,868 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 12:27:37] 2025-11-23 17:26:34,868 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 12:27:37] 2025-11-23 17:26:34,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:27:37] 2025-11-23 17:26:34,869 | INFO     | will abort loop
[2025-11-23 12:27:37] 2025-11-23 17:26:34,889 | INFO     | all data control threads have been joined
[2025-11-23 12:27:37] 2025-11-23 17:26:35,068 | INFO     | all job control threads have been joined
[2025-11-23 12:27:37] 2025-11-23 17:26:35,547 | INFO     | all payload control threads have been joined
[2025-11-23 12:27:37] 2025-11-23 17:26:35,731 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:35,732 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:35,733 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:35,874 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:35,890 | INFO     | [data] control thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:35,933 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,073 | INFO     | [job] control thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,351 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,413 | INFO     | [job] validate thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,527 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,538 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,553 | INFO     | [payload] control thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:27:37] 2025-11-23 17:26:36,732 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:36,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:37,312 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:26:40,613 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:27:37] 2025-11-23 17:27:04,589 | INFO     | PID=7227 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 12:27:37] 2025-11-23 17:27:04,590 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:27:37] 2025-11-23 17:27:04,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:27:37] 2025-11-23 17:27:04,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:27:37] 2025-11-23 17:27:31,028 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:27:37] 2025-11-23 17:27:31,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507980261184)>', '<ExcThread(monitor, started 140507539814144)>']
[2025-11-23 12:27:37] 2025-11-23 17:27:32,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:27:37] 2025-11-23 17:27:32,734 | INFO     | [monitor] control thread has ended
[2025-11-23 12:27:37] 2025-11-23 17:27:36,919 | INFO     | all workflow threads have been joined
[2025-11-23 12:27:37] 2025-11-23 17:27:36,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:27:37] 2025-11-23 17:27:36,923 | INFO     | traces error code: 0
[2025-11-23 12:27:37] 2025-11-23 17:27:36,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:27:37] 2025-11-23 17:27:37,034 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:27:37] 2025-11-23 17:27:37,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:27:37] 2025-11-23 17:27:37,042 [wrapper] pilotpid: 7227
[2025-11-23 12:27:37] 2025-11-23 17:27:37,047 [wrapper] Pilot exit status: 0
[2025-11-23 12:27:37] 2025-11-23 17:27:37,065 [wrapper] pandaids: 6895336067
[2025-11-23 12:27:37] 2025-11-23 17:27:37,117 [wrapper] cleanup supervisor_pilot 22562 7228
[2025-11-23 12:27:37] 2025-11-23 17:27:37,122 [wrapper] Test setup, not cleaning
[2025-11-23 12:27:37] 2025-11-23 17:27:37,127 [wrapper] apfmon messages muted
[2025-11-23 12:27:37] 2025-11-23 17:27:37,131 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:27:37] 2025-11-23 17:27:37,135 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:27:37]  *** Error codes and diagnostics ***
[2025-11-23 12:27:37]     "exeErrorCode": 0,
[2025-11-23 12:27:37]     "exeErrorDiag": "",
[2025-11-23 12:27:37]     "pilotErrorCode": 0,
[2025-11-23 12:27:37]     "pilotErrorDiag": "",
[2025-11-23 12:27:37]  *** Listing of results directory ***
[2025-11-23 12:27:37] total 1316772
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 00:12 queuedata.json
[2025-11-23 12:27:37] -rwx------ 1 boincer umatlas     36292 Nov 22 00:12 runpilot2-wrapper.sh
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas       100 Nov 22 23:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:27:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 23:42 run_atlas
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas       105 Nov 22 23:42 job.xml
[2025-11-23 12:27:37] -rw-r--r-- 2 boincer umatlas 409949334 Nov 22 23:42 EVNT.47483658._000267.pool.root.1
[2025-11-23 12:27:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 23:42 start_atlas.sh
[2025-11-23 12:27:37] drwxrwx--x 2 boincer umatlas      4096 Nov 22 23:42 shared
[2025-11-23 12:27:37] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 23:42 input.tar.gz
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas         0 Nov 22 23:42 boinc_lockfile
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 23:42 pandaJob.out
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas        57 Nov 22 23:42 setup.sh.local
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas    989784 Nov 22 23:43 agis_schedconf.cvmfs.json
[2025-11-23 12:27:37] drwx------ 5 boincer umatlas      4096 Nov 22 23:43 pilot3
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas       533 Nov 23 12:17 boinc_task_state.xml
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas      5911 Nov 23 12:20 init_data.xml
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas 917932327 Nov 23 12:25 HITS.47556137._002633.pool.root.1
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas      1061 Nov 23 12:26 memory_monitor_summary.json
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas   1526164 Nov 23 12:26 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas   1984097 Nov 23 12:26 log.47556137._002633.job.log.tgz.1
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas      8667 Nov 23 12:26 heartbeat.json
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas        95 Nov 23 12:27 pilot_heartbeat.json
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:27 boinc_mmap_file
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:27 wrapper_checkpoint.txt
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas      4931 Nov 23 12:27 pilotlog.txt
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas   6298394 Nov 23 12:27 log.47556137._002633.job.log.1
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas       353 Nov 23 12:27 output.list
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:27 runtime_log
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas   8304640 Nov 23 12:27 result.tar.gz
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 12:27 runtime_log.err
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas       667 Nov 23 12:27 qnjLDmi6ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQyJKDmGmr4Io.diag
[2025-11-23 12:27:37] -rw-r--r-- 1 boincer umatlas     21263 Nov 23 12:27 stderr.txt
[2025-11-23 12:27:37] HITS file was successfully produced:
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas 917932327 Nov 23 12:25 shared/HITS.pool.root.1
[2025-11-23 12:27:37]  *** Contents of shared directory: ***
[2025-11-23 12:27:37] total 1305476
[2025-11-23 12:27:37] -rw-r--r-- 2 boincer umatlas 409949334 Nov 22 23:42 ATLAS.root_0
[2025-11-23 12:27:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 23:42 start_atlas.sh
[2025-11-23 12:27:37] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 23:42 input.tar.gz
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas 917932327 Nov 23 12:25 HITS.pool.root.1
[2025-11-23 12:27:37] -rw------- 1 boincer umatlas   8304640 Nov 23 12:27 result.tar.gz
12:27:39 (2403): run_atlas exited; CPU time 350088.904617
12:27:39 (2403): called boinc_finish(0)

</stderr_txt>
]]>

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