Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:21 (3110232): wrapper (7.7.26015): starting
00:01:21 (3110232): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:01:21] Arguments: --nthreads 8
[2025-11-23 00:01:21] Threads: 8
[2025-11-23 00:01:21] Checking for CVMFS
[2025-11-23 00:01:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:01:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:01:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:01:27] 2.13.3.0 9230 25149 317324 153197 3 165 32503458 32503809 24241 16776704 0 192677209 99.832 80184818 34344 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:01:27] CVMFS is ok
[2025-11-23 00:01:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:01:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:01:27] Further information can be found at the LHC@home message board.
[2025-11-23 00:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:01:27] Checking for apptainer binary...
[2025-11-23 00:01:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:01:27] Running /usr/bin/apptainer --version
[2025-11-23 00:01:27] apptainer version 1.4.4-1.el9
[2025-11-23 00:01:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:01:29] c-4-35.aglt2.org
[2025-11-23 00:01:29] apptainer works
[2025-11-23 00:01:29] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:01:29] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:01:29] Starting ATLAS job with PandaID=6895336428
[2025-11-23 00:01:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:08:54]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:08:54] 2025-11-25 00:07:52,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:08:54] 2025-11-25 00:07:52,429 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 19:08:54] 2025-11-25 00:07:52,435 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.182275
[2025-11-24 19:08:54] 2025-11-25 00:07:52,442 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895336428/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:08:54] 2025-11-25 00:07:52,442 | INFO     | extracted standard info from prmon json
[2025-11-24 19:08:54] 2025-11-25 00:07:52,443 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:08:54] 2025-11-25 00:07:52,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:08:54] 2025-11-25 00:07:52,485 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:08:54] 2025-11-25 00:07:52,488 | INFO     | sum of square deviations: 5074943819715.809
[2025-11-24 19:08:54] 2025-11-25 00:07:52,643 | INFO     | sum of deviations: 16395643790187.363
[2025-11-24 19:08:54] 2025-11-25 00:07:52,644 | INFO     | mean x: 1763951781.6471052
[2025-11-24 19:08:54] 2025-11-25 00:07:52,644 | INFO     | mean y: 2948464.423395037
[2025-11-24 19:08:54] 2025-11-25 00:07:52,644 | INFO     | intersect: -5695858478.541315
[2025-11-24 19:08:54] 2025-11-25 00:07:52,647 | INFO     | chi2: 9.575003280483658
[2025-11-24 19:08:54] 2025-11-25 00:07:52,650 | INFO     | sum of square deviations: 5045020499193.204
[2025-11-24 19:08:54] 2025-11-25 00:07:52,799 | INFO     | sum of deviations: 17225566393956.86
[2025-11-24 19:08:54] 2025-11-25 00:07:52,799 | INFO     | mean x: 1763951629.1523283
[2025-11-24 19:08:54] 2025-11-25 00:07:52,799 | INFO     | mean y: 2952693.8318863455
[2025-11-24 19:08:54] 2025-11-25 00:07:52,799 | INFO     | intersect: -6019830743.529955
[2025-11-24 19:08:54] 2025-11-25 00:07:52,802 | INFO     | chi2: 6.734950508452065
[2025-11-24 19:08:54] 2025-11-25 00:07:52,803 | INFO     | current chi2=6.734950508452065 (change=29.661115394292953 %)
[2025-11-24 19:08:54] 2025-11-25 00:07:52,806 | INFO     | sum of square deviations: 5015215041345.463
[2025-11-24 19:08:54] 2025-11-25 00:07:52,955 | INFO     | sum of deviations: 17646537829905.402
[2025-11-24 19:08:54] 2025-11-25 00:07:52,955 | INFO     | mean x: 1763951476.6575723
[2025-11-24 19:08:54] 2025-11-25 00:07:52,956 | INFO     | mean y: 2954847.482008699
[2025-11-24 19:08:54] 2025-11-25 00:07:52,956 | INFO     | intersect: -6203685586.943818
[2025-11-24 19:08:54] 2025-11-25 00:07:52,959 | INFO     | chi2: 5.835116670065207
[2025-11-24 19:08:54] 2025-11-25 00:07:52,959 | INFO     | current chi2=5.835116670065207 (change=13.360659996797395 %)
[2025-11-24 19:08:54] 2025-11-25 00:07:52,960 | INFO     | right removable region: 2528
[2025-11-24 19:08:54] 2025-11-25 00:07:52,963 | INFO     | sum of square deviations: 5045016399383.206
[2025-11-24 19:08:54] 2025-11-25 00:07:53,116 | INFO     | sum of deviations: 15446654642204.475
[2025-11-24 19:08:54] 2025-11-25 00:07:53,117 | INFO     | mean x: 1763951934.1523283
[2025-11-24 19:08:54] 2025-11-25 00:07:53,117 | INFO     | mean y: 2953299.558405683
[2025-11-24 19:08:54] 2025-11-25 00:07:53,117 | INFO     | intersect: -5397852996.260733
[2025-11-24 19:08:54] 2025-11-25 00:07:53,120 | INFO     | chi2: 6.164158617706235
[2025-11-24 19:08:54] 2025-11-25 00:07:53,121 | INFO     | current chi2=6.164158617706235 (change=35.62238636230663 %)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,124 | INFO     | sum of square deviations: 5015209621082.993
[2025-11-24 19:08:54] 2025-11-25 00:07:53,274 | INFO     | sum of deviations: 15046441315980.73
[2025-11-24 19:08:54] 2025-11-25 00:07:53,274 | INFO     | mean x: 1763952086.6504548
[2025-11-24 19:08:54] 2025-11-25 00:07:53,274 | INFO     | mean y: 2955346.2123368923
[2025-11-24 19:08:54] 2025-11-25 00:07:53,275 | INFO     | intersect: -5289186670.028346
[2025-11-24 19:08:54] 2025-11-25 00:07:53,278 | INFO     | chi2: 5.603182483900234
[2025-11-24 19:08:54] 2025-11-25 00:07:53,278 | INFO     | current chi2=5.603182483900234 (change=9.100611593521059 %)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,278 | INFO     | left removable region: 20
[2025-11-24 19:08:54] 2025-11-25 00:07:53,281 | INFO     | sum of square deviations: 4891310443279.246
[2025-11-24 19:08:54] 2025-11-25 00:07:53,502 | INFO     | sum of deviations: 15826126873856.766
[2025-11-24 19:08:54] 2025-11-25 00:07:53,502 | INFO     | mean x: 1763952056.1463318
[2025-11-24 19:08:54] 2025-11-25 00:07:53,503 | INFO     | mean y: 2964849.5893141944
[2025-11-24 19:08:54] 2025-11-25 00:07:53,503 | INFO     | intersect: -5704407308.38324
[2025-11-24 19:08:54] 2025-11-25 00:07:53,506 | INFO     | chi2: 1.4846872674912914
[2025-11-24 19:08:54] 2025-11-25 00:07:53,506 | INFO     | current memory leak: 3.24 B/s (using 2508 data points, chi2=1.48)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,508 | INFO     | could have reported an average CPU frequency of 2600 MHz (87 samples)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | ..............................
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . Timing measurements:
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . get job = 0 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . initial setup = 10 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . payload setup = 27 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . stage-in = 1 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . payload execution = 154885 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . stage-out = 6 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,509 | INFO     | . log creation = 1 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,510 | INFO     | ..............................
[2025-11-24 19:08:54] 2025-11-25 00:07:53,734 | INFO     | 
[2025-11-24 19:08:54] 2025-11-25 00:07:53,734 | INFO     | job summary report
[2025-11-24 19:08:54] 2025-11-25 00:07:53,734 | INFO     | --------------------------------------------------
[2025-11-24 19:08:54] 2025-11-25 00:07:53,734 | INFO     | PanDA job id: 6895336428
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | task id: 47556137
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | errors: (none)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | pilot state: finished 
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | transexitcode: 0
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | exeerrorcode: 0
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | exeerrordiag: 
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | exitcode: 0
[2025-11-24 19:08:54] 2025-11-25 00:07:53,735 | INFO     | exitmsg: OK
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | cpuconsumptiontime: 304084 s
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | nevents: 1000
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | neventsw: 0
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | pid: 3186213
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | pgrp: 3186213
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | corecount: 8
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | event service: False
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | sizes: {0: 2297979, 1: 2298580, 2: 2298692, 5: 2298863, 6: 2298919, 7: 2298947, 18: 2299103, 29: 2299131, 40: 2299159, 52: 2299187, 57: 2299477, 64: 2299785, 15491
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | --------------------------------------------------
[2025-11-24 19:08:54] 2025-11-25 00:07:53,736 | INFO     | 
[2025-11-24 19:08:54] 2025-11-25 00:07:53,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 19:08:54] 2025-11-25 00:07:53,832 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:08:54] 2025-11-25 00:07:53,848 | INFO     | job 6895336428 has completed (purged errors)
[2025-11-24 19:08:54] 2025-11-25 00:07:53,848 | INFO     | overall cleanup function is called
[2025-11-24 19:08:54] 2025-11-25 00:07:54,887 | INFO     | --- collectZombieJob: --- 10, [3186213]
[2025-11-24 19:08:54] 2025-11-25 00:07:54,887 | INFO     | zombie collector waiting for pid 3186213
[2025-11-24 19:08:54] 2025-11-25 00:07:54,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:08:54] 2025-11-25 00:07:54,887 | INFO     | collected zombie processes
[2025-11-24 19:08:54] 2025-11-25 00:07:54,888 | INFO     | will attempt to kill all subprocesses of pid=3186213
[2025-11-24 19:08:54] 2025-11-25 00:07:56,035 | INFO     | process IDs to be killed: [3186213] (in reverse order)
[2025-11-24 19:08:54] 2025-11-25 00:07:56,407 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:08:54] 2025-11-25 00:07:56,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:08:54] 2025-11-25 00:07:56,567 | INFO     | did not find any defunct processes belonging to 3186213
[2025-11-24 19:08:54] 2025-11-25 00:07:56,602 | INFO     | did not find any defunct processes belonging to 3186213
[2025-11-24 19:08:54] 2025-11-25 00:07:56,608 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:08:54] 2025-11-25 00:07:56,610 | INFO     | ready for new job
[2025-11-24 19:08:54] 2025-11-25 00:07:56,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:08:54] 2025-11-25 00:07:56,634 | INFO     | ***************************************
[2025-11-24 19:08:54] 2025-11-25 00:07:56,635 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:08:54] 2025-11-25 00:07:56,635 | INFO     | ***************************************
[2025-11-24 19:08:54] 2025-11-25 00:07:56,635 | INFO     | 
[2025-11-24 19:08:54] 2025-11-25 00:07:56,637 | INFO     | architecture information:
[2025-11-24 19:08:54] 2025-11-25 00:07:56,644 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:08:54] 2025-11-25 00:07:56,698 | INFO     | cat /etc/os-release:
[2025-11-24 19:08:54] NAME="CentOS Linux"
[2025-11-24 19:08:54] VERSION="7 (Core)"
[2025-11-24 19:08:54] ID="centos"
[2025-11-24 19:08:54] ID_LIKE="rhel fedora"
[2025-11-24 19:08:54] VERSION_ID="7"
[2025-11-24 19:08:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:08:54] ANSI_COLOR="0;31"
[2025-11-24 19:08:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:08:54] HOME_URL="https://www.centos.org/"
[2025-11-24 19:08:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:08:54] 
[2025-11-24 19:08:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:08:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:08:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:08:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:08:54] 
[2025-11-24 19:08:54] 2025-11-25 00:07:56,699 | INFO     | ***************************************
[2025-11-24 19:08:54] 2025-11-25 00:07:57,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 19:08:54] 2025-11-25 00:07:57,247 | INFO     | sufficient remaining disk space (93313826816 B)
[2025-11-24 19:08:54] 2025-11-25 00:07:57,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:08:54] 2025-11-25 00:07:57,248 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:08:54] 2025-11-25 00:07:57,248 | INFO     | update_server=False
[2025-11-24 19:08:54] 2025-11-25 00:07:57,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:08:54] 2025-11-25 00:07:57,263 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 19:08:54] 2025-11-25 00:07:57,263 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 19:08:54] 2025-11-25 00:07:57,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:08:54] 2025-11-25 00:07:57,264 | INFO     | will abort loop
[2025-11-24 19:08:54] 2025-11-25 00:07:57,670 | INFO     | all data control threads have been joined
[2025-11-24 19:08:54] 2025-11-25 00:07:58,254 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,277 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,318 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,340 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,411 | INFO     | all payload control threads have been joined
[2025-11-24 19:08:54] 2025-11-25 00:07:58,485 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:08:54] 2025-11-25 00:07:58,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:08:54] 2025-11-25 00:07:58,676 | INFO     | [data] control thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:58,927 | INFO     | all job control threads have been joined
[2025-11-24 19:08:54] 2025-11-25 00:07:59,080 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:59,090 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:59,103 | INFO     | [job] validate thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:59,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:08:54] 2025-11-25 00:07:59,419 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:59,420 | INFO     | [payload] control thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:59,653 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:07:59,933 | INFO     | [job] control thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:08:00,576 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:08:03,320 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:08:54] 2025-11-25 00:08:26,029 | INFO     | PID=3145589 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:08:54] 2025-11-25 00:08:26,029 | INFO     | .. there are 43 such processes running
[2025-11-24 19:08:54] 2025-11-25 00:08:26,031 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:08:54] 2025-11-25 00:08:26,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:08:54] 2025-11-25 00:08:26,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:08:54] 2025-11-25 00:08:47,898 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:08:54] 2025-11-25 00:08:48,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179200620352)>', '<ExcThread(monitor, started 140178312120064)>']
[2025-11-24 19:08:54] 2025-11-25 00:08:49,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:08:54] 2025-11-25 00:08:49,248 | INFO     | [monitor] control thread has ended
[2025-11-24 19:08:54] 2025-11-25 00:08:53,383 | INFO     | all workflow threads have been joined
[2025-11-24 19:08:54] 2025-11-25 00:08:53,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:08:54] 2025-11-25 00:08:53,384 | INFO     | traces error code: 0
[2025-11-24 19:08:54] 2025-11-25 00:08:53,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:08:54] 2025-11-25 00:08:53,599 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:08:54] 2025-11-25 00:08:53,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:08:54] 2025-11-25 00:08:53,635 [wrapper] pilotpid: 3145589
[2025-11-24 19:08:54] 2025-11-25 00:08:53,653 [wrapper] Pilot exit status: 0
[2025-11-24 19:08:54] 2025-11-25 00:08:53,772 [wrapper] pandaids: 6895336428
[2025-11-24 19:08:54] 2025-11-25 00:08:53,928 [wrapper] cleanup supervisor_pilot 3515195 3145590
[2025-11-24 19:08:54] 2025-11-25 00:08:53,934 [wrapper] Test setup, not cleaning
[2025-11-24 19:08:54] 2025-11-25 00:08:53,943 [wrapper] apfmon messages muted
[2025-11-24 19:08:54] 2025-11-25 00:08:53,946 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:08:54] 2025-11-25 00:08:53,948 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:08:54]  *** Error codes and diagnostics ***
[2025-11-24 19:08:54]     "exeErrorCode": 0,
[2025-11-24 19:08:54]     "exeErrorDiag": "",
[2025-11-24 19:08:54]     "pilotErrorCode": 0,
[2025-11-24 19:08:54]     "pilotErrorDiag": "",
[2025-11-24 19:08:54]  *** Listing of results directory ***
[2025-11-24 19:08:54] total 1344184
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:35 queuedata.json
[2025-11-24 19:08:54] -rwx------. 1 boincer umatlas     36292 Nov 22 00:36 runpilot2-wrapper.sh
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:08:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:01 run_atlas
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:01 job.xml
[2025-11-24 19:08:54] -rw-r--r--. 2 boincer umatlas 409603981 Nov 23 00:01 EVNT.47483658._000280.pool.root.1
[2025-11-24 19:08:54] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 00:01 input.tar.gz
[2025-11-24 19:08:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:01 start_atlas.sh
[2025-11-24 19:08:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:01 shared
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:01 boinc_lockfile
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 00:01 pandaJob.out
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas        57 Nov 23 00:01 setup.sh.local
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas    989784 Nov 23 00:03 agis_schedconf.cvmfs.json
[2025-11-24 19:08:54] drwx------. 5 boincer umatlas      4096 Nov 23 00:03 pilot3
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas       533 Nov 24 18:54 boinc_task_state.xml
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas      6660 Nov 24 19:04 init_data.xml
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas 919029743 Nov 24 19:06 HITS.47556137._002763.pool.root.1
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas      1069 Nov 24 19:07 memory_monitor_summary.json
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas   3192900 Nov 24 19:07 log.47556137._002763.job.log.tgz.1
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas      8649 Nov 24 19:07 heartbeat.json
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas        95 Nov 24 19:08 pilot_heartbeat.json
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:08 boinc_mmap_file
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:08 wrapper_checkpoint.txt
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas      5010 Nov 24 19:08 pilotlog.txt
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas  18752753 Nov 24 19:08 log.47556137._002763.job.log.1
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas       353 Nov 24 19:08 output.list
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:08 runtime_log
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas  21964800 Nov 24 19:08 result.tar.gz
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas       666 Nov 24 19:08 VJgMDmWTvg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKzHKDm1a0LEm.diag
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas      9334 Nov 24 19:08 runtime_log.err
[2025-11-24 19:08:54] -rw-r--r--. 1 boincer umatlas     21363 Nov 24 19:08 stderr.txt
[2025-11-24 19:08:54] HITS file was successfully produced:
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas 919029743 Nov 24 19:06 shared/HITS.pool.root.1
[2025-11-24 19:08:54]  *** Contents of shared directory: ***
[2025-11-24 19:08:54] total 1319552
[2025-11-24 19:08:54] -rw-r--r--. 2 boincer umatlas 409603981 Nov 23 00:01 ATLAS.root_0
[2025-11-24 19:08:54] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 00:01 input.tar.gz
[2025-11-24 19:08:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:01 start_atlas.sh
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas 919029743 Nov 24 19:06 HITS.pool.root.1
[2025-11-24 19:08:54] -rw-------. 1 boincer umatlas  21964800 Nov 24 19:08 result.tar.gz
19:08:56 (3110232): run_atlas exited; CPU time 309311.478936
19:08:56 (3110232): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN