Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:49:52 (1838043): wrapper (7.7.26015): starting
23:49:52 (1838043): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:49:52] Arguments: --nthreads 8
[2025-11-22 23:49:52] Threads: 8
[2025-11-22 23:49:52] Checking for CVMFS
[2025-11-22 23:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:49:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:49:54] 2.13.2.0 6384 29659 235260 153197 0 183 39299689 40960001 9986 16776704 0 28673834 99.769 16989615 35452 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 23:49:54] CVMFS is ok
[2025-11-22 23:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:49:54] Further information can be found at the LHC@home message board.
[2025-11-22 23:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:49:54] Checking for apptainer binary...
[2025-11-22 23:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:49:54] Running /usr/bin/apptainer --version
[2025-11-22 23:49:54] apptainer version 1.4.4-1.el9
[2025-11-22 23:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:49:54] c-210-33-2.aglt2.org
[2025-11-22 23:49:54] apptainer works
[2025-11-22 23:49:54] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:49:54] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:49:54] Starting ATLAS job with PandaID=6895336452
[2025-11-22 23:49:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:47:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:47:55] 2025-11-24 01:36:26,655 | INFO     | monitor loop #4810: job 0:6895336452 is in state 'finished'
[2025-11-23 20:47:55] 2025-11-24 01:36:26,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:47:55] 2025-11-24 01:36:26,659 | INFO     | time since job start (74761s) is within the limit (172800.0s)
[2025-11-23 20:47:55] 2025-11-24 01:36:28,666 | INFO     | time since job start (74763s) is within the limit (172800.0s)
[2025-11-23 20:47:55] 2025-11-24 01:36:29,160 | INFO     | monitor loop #4811: job 0:6895336452 is in state 'finished'
[2025-11-23 20:47:55] 2025-11-24 01:36:29,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:47:55] 2025-11-24 01:36:30,700 | INFO     | time since job start (74765s) is within the limit (172800.0s)
[2025-11-23 20:47:55] 2025-11-24 01:36:31,665 | INFO     | monitor loop #4812: job 0:6895336452 is in state 'finished'
[2025-11-23 20:47:55] 2025-11-24 01:36:31,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:47:55] 2025-11-24 01:36:32,707 | INFO     | time since job start (74767s) is within the limit (172800.0s)
[2025-11-23 20:47:55] 2025-11-24 01:36:34,170 | INFO     | monitor loop #4813: job 0:6895336452 is in state 'finished'
[2025-11-23 20:47:55] 2025-11-24 01:36:34,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:47:55] 2025-11-24 01:36:34,750 | INFO     | time since job start (74769s) is within the limit (172800.0s)
[2025-11-23 20:47:55] 2025-11-24 01:36:36,693 | INFO     | monitor loop #4814: job 0:6895336452 is in state 'finished'
[2025-11-23 20:47:55] 2025-11-24 01:36:36,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,007 | INFO     | PID=1843034 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 20:47:55] 2025-11-24 01:36:37,007 | INFO     | .. there are 10 such processes running
[2025-11-23 20:47:55] 2025-11-24 01:36:37,086 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 20:47:55] 2025-11-24 01:36:37,090 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2957.6288035714283
[2025-11-23 20:47:55] 2025-11-24 01:36:37,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895336452/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,113 | INFO     | extracted standard info from prmon json
[2025-11-23 20:47:55] 2025-11-24 01:36:37,113 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 20:47:55] 2025-11-24 01:36:37,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 20:47:55] 2025-11-24 01:36:37,170 | INFO     | fitting pss+swap vs Time
[2025-11-23 20:47:55] 2025-11-24 01:36:37,172 | INFO     | sum of square deviations: 568616590675.7047
[2025-11-23 20:47:55] 2025-11-24 01:36:37,250 | INFO     | sum of deviations: -408476017014.0442
[2025-11-23 20:47:55] 2025-11-24 01:36:37,250 | INFO     | mean x: 1763910802.2933006
[2025-11-23 20:47:55] 2025-11-24 01:36:37,250 | INFO     | mean y: 2908945.2508169934
[2025-11-23 20:47:55] 2025-11-24 01:36:37,250 | INFO     | intersect: 1270046187.99747
[2025-11-23 20:47:55] 2025-11-24 01:36:37,252 | INFO     | chi2: 33.718954260431225
[2025-11-23 20:47:55] 2025-11-24 01:36:37,261 | INFO     | sum of square deviations: 561678268002.6046
[2025-11-23 20:47:55] 2025-11-24 01:36:37,335 | INFO     | sum of deviations: 17724116367.071747
[2025-11-23 20:47:55] 2025-11-24 01:36:37,335 | INFO     | mean x: 1763910649.8113208
[2025-11-23 20:47:55] 2025-11-24 01:36:37,335 | INFO     | mean y: 2918310.400328138
[2025-11-23 20:47:55] 2025-11-24 01:36:37,335 | INFO     | intersect: -52743016.375854015
[2025-11-23 20:47:55] 2025-11-24 01:36:37,345 | INFO     | chi2: 30.010824258219742
[2025-11-23 20:47:55] 2025-11-24 01:36:37,345 | INFO     | current chi2=30.010824258219742 (change=10.99716786461236 %)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,345 | INFO     | right removable region: 1218
[2025-11-23 20:47:55] 2025-11-24 01:36:37,346 | INFO     | sum of square deviations: 561674838445.3561
[2025-11-23 20:47:55] 2025-11-24 01:36:37,419 | INFO     | sum of deviations: -826742134121.1781
[2025-11-23 20:47:55] 2025-11-24 01:36:37,419 | INFO     | mean x: 1763910954.8129613
[2025-11-23 20:47:55] 2025-11-24 01:36:37,419 | INFO     | mean y: 2918130.5430680886
[2025-11-23 20:47:55] 2025-11-24 01:36:37,419 | INFO     | intersect: 2599259300.4950256
[2025-11-23 20:47:55] 2025-11-24 01:36:37,428 | INFO     | chi2: 30.82043022711446
[2025-11-23 20:47:55] 2025-11-24 01:36:37,429 | INFO     | current chi2=30.82043022711446 (change=8.596126709416213 %)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,429 | INFO     | left removable region: 10
[2025-11-23 20:47:55] 2025-11-24 01:36:37,430 | INFO     | sum of square deviations: 546606603711.7717
[2025-11-23 20:47:55] 2025-11-24 01:36:37,515 | INFO     | sum of deviations: -419891313043.1456
[2025-11-23 20:47:55] 2025-11-24 01:36:37,515 | INFO     | mean x: 1763910924.352649
[2025-11-23 20:47:55] 2025-11-24 01:36:37,515 | INFO     | mean y: 2931635.7491721855
[2025-11-23 20:47:55] 2025-11-24 01:36:37,515 | INFO     | intersect: 1357929671.0603797
[2025-11-23 20:47:55] 2025-11-24 01:36:37,525 | INFO     | chi2: 26.295561408394757
[2025-11-23 20:47:55] 2025-11-24 01:36:37,525 | INFO     | current memory leak: -0.77 B/s (using 1208 data points, chi2=26.30)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | could have reported an average CPU frequency of 2933 MHz (44 samples)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | ..............................
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . Timing measurements:
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . get job = 0 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . initial setup = 3 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . payload setup = 19 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . stage-in = 0 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . payload execution = 74672 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . stage-out = 8 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,527 | INFO     | . log creation = 3 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,528 | INFO     | ..............................
[2025-11-23 20:47:55] 2025-11-24 01:36:37,872 | INFO     | 
[2025-11-23 20:47:55] 2025-11-24 01:36:37,872 | INFO     | job summary report
[2025-11-23 20:47:55] 2025-11-24 01:36:37,872 | INFO     | --------------------------------------------------
[2025-11-23 20:47:55] 2025-11-24 01:36:37,872 | INFO     | PanDA job id: 6895336452
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | task id: 47556137
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | errors: (none)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | pilot state: finished 
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | transexitcode: 0
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | exeerrorcode: 0
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | exeerrordiag: 
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | exitcode: 0
[2025-11-23 20:47:55] 2025-11-24 01:36:37,873 | INFO     | exitmsg: OK
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | cpuconsumptiontime: 234469 s
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | nevents: 1000
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | neventsw: 0
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | pid: 1849503
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | pgrp: 1849503
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | corecount: 8
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | event service: False
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | sizes: {0: 2298756, 1: 2298784, 12: 2298784, 14: 2299074, 22: 2299102, 74693: 2359765, 74702: 2368759, 74704: 2368815, 74736: 2369061}
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | --------------------------------------------------
[2025-11-23 20:47:55] 2025-11-24 01:36:37,874 | INFO     | 
[2025-11-23 20:47:55] 2025-11-24 01:36:37,875 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 20:47:55] 2025-11-24 01:36:37,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 20:47:55] 2025-11-24 01:36:37,938 | INFO     | job 6895336452 has completed (purged errors)
[2025-11-23 20:47:55] 2025-11-24 01:36:37,938 | INFO     | overall cleanup function is called
[2025-11-23 20:47:55] 2025-11-24 01:36:38,995 | INFO     | --- collectZombieJob: --- 10, [1849503]
[2025-11-23 20:47:55] 2025-11-24 01:36:38,995 | INFO     | zombie collector waiting for pid 1849503
[2025-11-23 20:47:55] 2025-11-24 01:36:38,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 20:47:55] 2025-11-24 01:36:38,995 | INFO     | collected zombie processes
[2025-11-23 20:47:55] 2025-11-24 01:36:38,995 | INFO     | will attempt to kill all subprocesses of pid=1849503
[2025-11-23 20:47:55] 2025-11-24 01:36:39,611 | INFO     | process IDs to be killed: [1849503] (in reverse order)
[2025-11-23 20:47:55] 2025-11-24 01:36:39,775 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 20:47:55] 2025-11-24 01:36:39,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 20:47:55] 2025-11-24 01:36:39,792 | INFO     | did not find any defunct processes belonging to 1849503
[2025-11-23 20:47:55] 2025-11-24 01:36:39,809 | INFO     | did not find any defunct processes belonging to 1849503
[2025-11-23 20:47:55] 2025-11-24 01:36:39,810 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 20:47:55] 2025-11-24 01:36:39,810 | INFO     | ready for new job
[2025-11-23 20:47:55] 2025-11-24 01:36:39,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 20:47:55] 2025-11-24 01:36:39,824 | INFO     | ***************************************
[2025-11-23 20:47:55] 2025-11-24 01:36:39,824 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 20:47:55] 2025-11-24 01:36:39,824 | INFO     | ***************************************
[2025-11-23 20:47:55] 2025-11-24 01:36:39,824 | INFO     | 
[2025-11-23 20:47:55] 2025-11-24 01:36:39,831 | INFO     | architecture information:
[2025-11-23 20:47:55] 2025-11-24 01:36:39,832 | INFO     | executing command: cat /etc/os-release
[2025-11-23 20:47:55] 2025-11-24 01:36:39,951 | INFO     | cat /etc/os-release:
[2025-11-23 20:47:55] NAME="CentOS Linux"
[2025-11-23 20:47:55] VERSION="7 (Core)"
[2025-11-23 20:47:55] ID="centos"
[2025-11-23 20:47:55] ID_LIKE="rhel fedora"
[2025-11-23 20:47:55] VERSION_ID="7"
[2025-11-23 20:47:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:47:55] ANSI_COLOR="0;31"
[2025-11-23 20:47:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:47:55] HOME_URL="https://www.centos.org/"
[2025-11-23 20:47:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:47:55] 
[2025-11-23 20:47:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:47:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:47:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:47:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:47:55] 
[2025-11-23 20:47:55] 2025-11-24 01:36:39,952 | INFO     | ***************************************
[2025-11-23 20:47:55] 2025-11-24 01:36:40,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 20:47:55] 2025-11-24 01:36:40,535 | INFO     | sufficient remaining disk space (69814190080 B)
[2025-11-23 20:47:55] 2025-11-24 01:36:40,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:47:55] 2025-11-24 01:36:40,536 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:47:55] 2025-11-24 01:36:40,536 | INFO     | update_server=False
[2025-11-23 20:47:55] 2025-11-24 01:36:40,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:47:55] 2025-11-24 01:36:40,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:47:55] 2025-11-24 01:36:40,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:47:55] 2025-11-24 01:36:40,537 | INFO     | aborting loop
[2025-11-23 20:47:55] 2025-11-24 01:36:40,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:47:55] 2025-11-24 01:36:41,533 | INFO     | all payload control threads have been joined
[2025-11-23 20:47:55] 2025-11-24 01:36:41,543 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:41,544 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:41,581 | INFO     | all data control threads have been joined
[2025-11-23 20:47:55] 2025-11-24 01:36:41,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:41,962 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,057 | INFO     | all job control threads have been joined
[2025-11-23 20:47:55] 2025-11-24 01:36:42,433 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,526 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,543 | INFO     | [payload] control thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,543 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,587 | INFO     | [data] control thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,653 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:47:55] 2025-11-24 01:36:42,905 | INFO     | [job] validate thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,928 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:42,957 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:43,063 | INFO     | [job] control thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:43,888 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:36:44,548 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:47:55] 2025-11-24 01:37:09,470 | INFO     | PID=1843034 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 20:47:55] 2025-11-24 01:37:09,471 | INFO     | .. there are 10 such processes running
[2025-11-23 20:47:55] 2025-11-24 01:37:09,471 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:47:55] 2025-11-24 01:37:09,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:47:55] 2025-11-24 01:37:09,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:47:55] 2025-11-24 01:37:38,953 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:47:55] 2025-11-24 01:37:40,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747056146240)>', '<ExcThread(monitor, started 139746248468224)>']
[2025-11-23 20:47:55] 2025-11-24 01:37:41,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:47:55] 2025-11-24 01:37:41,740 | INFO     | [monitor] control thread has ended
[2025-11-23 20:47:55] 2025-11-24 01:37:45,786 | INFO     | all workflow threads have been joined
[2025-11-23 20:47:55] 2025-11-24 01:37:45,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:47:55] 2025-11-24 01:37:45,787 | INFO     | traces error code: 0
[2025-11-23 20:47:55] 2025-11-24 01:37:45,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:47:55] 2025-11-24 01:37:46,271 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:47:55] 2025-11-24 01:37:46,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:47:55] 2025-11-24 01:37:46,315 [wrapper] pilotpid: 1843034
[2025-11-23 20:47:55] 2025-11-24 01:37:46,331 [wrapper] Pilot exit status: 0
[2025-11-23 20:47:55] 2025-11-24 01:37:46,421 [wrapper] pandaids: 6895336452
[2025-11-23 20:47:55] 2025-11-24 01:37:46,494 [wrapper] cleanup supervisor_pilot 3556204 1843035
[2025-11-23 20:47:55] 2025-11-24 01:37:46,497 [wrapper] Test setup, not cleaning
[2025-11-23 20:47:55] 2025-11-24 01:37:46,503 [wrapper] apfmon messages muted
[2025-11-23 20:47:55] 2025-11-24 01:37:46,506 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:47:55] 2025-11-24 01:37:46,509 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:47:55]  *** Error codes and diagnostics ***
[2025-11-23 20:47:55]     "exeErrorCode": 0,
[2025-11-23 20:47:55]     "exeErrorDiag": "",
[2025-11-23 20:47:55]     "pilotErrorCode": 0,
[2025-11-23 20:47:55]     "pilotErrorDiag": "",
[2025-11-23 20:47:55]  *** Listing of results directory ***
[2025-11-23 20:47:55] total 1317616
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:36 queuedata.json
[2025-11-23 20:47:55] -rwx------. 1 boincer umatlas     36292 Nov 22 00:38 runpilot2-wrapper.sh
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas       100 Nov 22 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:47:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 23:49 run_atlas
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas       105 Nov 22 23:49 job.xml
[2025-11-23 20:47:55] -rw-r--r--. 2 boincer umatlas 408669905 Nov 22 23:49 EVNT.47483658._000282.pool.root.1
[2025-11-23 20:47:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:49 start_atlas.sh
[2025-11-23 20:47:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 23:49 shared
[2025-11-23 20:47:55] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 23:49 input.tar.gz
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas         0 Nov 22 23:49 boinc_lockfile
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 23:49 pandaJob.out
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas        57 Nov 22 23:49 setup.sh.local
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas    989784 Nov 22 23:50 agis_schedconf.cvmfs.json
[2025-11-23 20:47:55] drwx------. 5 boincer umatlas      4096 Nov 22 23:50 pilot3
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas       533 Nov 23 19:36 boinc_task_state.xml
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas 912292283 Nov 23 20:34 HITS.47556137._002787.pool.root.1
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas      1057 Nov 23 20:35 memory_monitor_summary.json
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas   1526164 Nov 23 20:35 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas   2321863 Nov 23 20:36 log.47556137._002787.job.log.tgz.1
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas        95 Nov 23 20:36 pilot_heartbeat.json
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas      8620 Nov 23 20:36 heartbeat.json
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas      4824 Nov 23 20:37 pilotlog.txt
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas   9854080 Nov 23 20:37 log.47556137._002787.job.log.1
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas       353 Nov 23 20:37 output.list
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas       620 Nov 23 20:37 runtime_log
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas  12195840 Nov 23 20:37 result.tar.gz
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas      9353 Nov 23 20:37 runtime_log.err
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas       662 Nov 23 20:37 H9TMDmJVvg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtzJKDmYRACKo.diag
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas      6841 Nov 23 20:47 init_data.xml
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 20:47 boinc_mmap_file
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas        29 Nov 23 20:47 wrapper_checkpoint.txt
[2025-11-23 20:47:55] -rw-r--r--. 1 boincer umatlas     21868 Nov 23 20:47 stderr.txt
[2025-11-23 20:47:55] HITS file was successfully produced:
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas 912292283 Nov 23 20:34 shared/HITS.pool.root.1
[2025-11-23 20:47:55]  *** Contents of shared directory: ***
[2025-11-23 20:47:55] total 1302520
[2025-11-23 20:47:55] -rw-r--r--. 2 boincer umatlas 408669905 Nov 22 23:49 ATLAS.root_0
[2025-11-23 20:47:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:49 start_atlas.sh
[2025-11-23 20:47:55] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 23:49 input.tar.gz
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas 912292283 Nov 23 20:34 HITS.pool.root.1
[2025-11-23 20:47:55] -rw-------. 1 boincer umatlas  12195840 Nov 23 20:37 result.tar.gz
20:47:57 (1838043): run_atlas exited; CPU time 235494.702657
20:47:57 (1838043): called boinc_finish(0)

</stderr_txt>
]]>

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