Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:55:18 (1479952): wrapper (7.7.26015): starting
18:55:18 (1479952): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 18:55:18] Arguments: --nthreads 3
[2025-11-25 18:55:18] Threads: 3
[2025-11-25 18:55:18] Checking for CVMFS
[2025-11-25 18:55:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:55:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:55:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:55:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:55:18] 2.9.2.0 52203 10728 96080 153292 1 81 27738806 36864000 0 130560 0 3981938 99.934 540880 5040 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 18:55:18] CVMFS is ok
[2025-11-25 18:55:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:55:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:55:18] Further information can be found at the LHC@home message board.
[2025-11-25 18:55:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:55:18] Checking for apptainer binary...
[2025-11-25 18:55:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 18:55:18] Running /usr/bin/apptainer --version
[2025-11-25 18:55:18] apptainer version 1.4.1-1.1
[2025-11-25 18:55:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:55:18] thA371b
[2025-11-25 18:55:18] apptainer works
[2025-11-25 18:55:18] Set ATHENA_PROC_NUMBER=3
[2025-11-25 18:55:18] Set ATHENA_CORE_NUMBER=3
[2025-11-25 18:55:18] Starting ATLAS job with PandaID=6895329396
[2025-11-25 18:55:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:04:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:04:02] ID_LIKE="rhel fedora"
[2025-11-26 03:04:02] VERSION_ID="7"
[2025-11-26 03:04:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:04:02] ANSI_COLOR="0;31"
[2025-11-26 03:04:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:04:02] HOME_URL="https://www.centos.org/"
[2025-11-26 03:04:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:04:02] 
[2025-11-26 03:04:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:04:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:04:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:04:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:04:02] 
[2025-11-26 03:04:02] 2025-11-26 02:03:27,159 | INFO     | ***************************************
[2025-11-26 03:04:02] 2025-11-26 02:03:27,662 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 03:04:02] 2025-11-26 02:03:27,675 | INFO     | sufficient remaining disk space (228773068800 B)
[2025-11-26 03:04:02] 2025-11-26 02:03:27,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:04:02] 2025-11-26 02:03:27,676 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:04:02] 2025-11-26 02:03:27,676 | INFO     | update_server=False
[2025-11-26 03:04:02] 2025-11-26 02:03:27,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:04:02] 2025-11-26 02:03:27,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:04:02] 2025-11-26 02:03:27,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:04:02] 2025-11-26 02:03:27,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:04:02] 2025-11-26 02:03:27,804 | INFO     | aborting loop
[2025-11-26 03:04:02] 2025-11-26 02:03:27,944 | INFO     | all payload control threads have been joined
[2025-11-26 03:04:02] 2025-11-26 02:03:28,065 | INFO     | all data control threads have been joined
[2025-11-26 03:04:02] 2025-11-26 02:03:28,681 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,682 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,702 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,725 | INFO     | all job control threads have been joined
[2025-11-26 03:04:02] 2025-11-26 02:03:28,810 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,816 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,950 | INFO     | [payload] control thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:28,982 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:29,071 | INFO     | [data] control thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:29,488 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:29,548 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:29,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:04:02] 2025-11-26 02:03:29,730 | INFO     | [job] control thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:29,744 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:30,018 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:30,125 | INFO     | [job] validate thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:33,692 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:04:02] 2025-11-26 02:03:57,537 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:04:02] 2025-11-26 02:03:57,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115135952704)>', '<ExcThread(monitor, started 140114516768512)>']
[2025-11-26 03:04:02] 2025-11-26 02:03:57,844 | INFO     | PID=1483676 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 03:04:02] 2025-11-26 02:03:57,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:04:02] 2025-11-26 02:03:57,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:04:02] 2025-11-26 02:03:57,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:04:02] 2025-11-26 02:03:57,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:04:02] 2025-11-26 02:03:57,845 | INFO     | [monitor] control thread has ended
[2025-11-26 03:04:02] 2025-11-26 02:04:02,816 | INFO     | all workflow threads have been joined
[2025-11-26 03:04:02] 2025-11-26 02:04:02,817 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:04:02] 2025-11-26 02:04:02,817 | INFO     | traces error code: 0
[2025-11-26 03:04:02] 2025-11-26 02:04:02,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:04:02] 2025-11-26 02:04:02,868 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:04:02] 2025-11-26 02:04:02,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:04:02] 2025-11-26 02:04:02,873 [wrapper] pilotpid: 1483676
[2025-11-26 03:04:02] 2025-11-26 02:04:02,875 [wrapper] Pilot exit status: 0
[2025-11-26 03:04:02] 2025-11-26 02:04:02,883 [wrapper] pandaids: 6895329396
[2025-11-26 03:04:02] 2025-11-26 02:04:02,899 [wrapper] cleanup supervisor_pilot 1541151 1483677
[2025-11-26 03:04:02] 2025-11-26 02:04:02,901 [wrapper] Test setup, not cleaning
[2025-11-26 03:04:02] 2025-11-26 02:04:02,904 [wrapper] apfmon messages muted
[2025-11-26 03:04:02] 2025-11-26 02:04:02,906 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:04:02] 2025-11-26 02:04:02,908 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:04:02]  *** Error codes and diagnostics ***
[2025-11-26 03:04:02]     "exeErrorCode": 0,
[2025-11-26 03:04:02]     "exeErrorDiag": "",
[2025-11-26 03:04:02]     "pilotErrorCode": 0,
[2025-11-26 03:04:02]     "pilotErrorDiag": "",
[2025-11-26 03:04:02]  *** Listing of results directory ***
[2025-11-26 03:04:02] total 1310500
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc    576529 Nov 21 19:54 pilot3.tar.gz
[2025-11-26 03:04:02] -rwx------ 1 boinc boinc     36292 Nov 21 20:21 runpilot2-wrapper.sh
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc      5112 Nov 21 20:21 queuedata.json
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc       100 Nov 25 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:04:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 18:55 run_atlas
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc       105 Nov 25 18:55 job.xml
[2025-11-26 03:04:02] -rw-r--r-- 2 boinc boinc 409763229 Nov 25 18:55 EVNT.47483658._000116.pool.root.1
[2025-11-26 03:04:02] -rw-r--r-- 2 boinc boinc    590099 Nov 25 18:55 input.tar.gz
[2025-11-26 03:04:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 18:55 start_atlas.sh
[2025-11-26 03:04:02] drwxrwx--x 2 boinc boinc      4096 Nov 25 18:55 shared
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 18:55 boinc_setup_complete
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc      6441 Nov 25 18:55 init_data.xml
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 18:55 boinc_lockfile
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc      2783 Nov 25 18:55 pandaJob.out
[2025-11-26 03:04:02] -rw------- 1 boinc boinc    991543 Nov 25 18:55 agis_schedconf.cvmfs.json
[2025-11-26 03:04:02] drwx------ 5 boinc boinc      4096 Nov 25 18:55 pilot3
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc       531 Nov 26 02:59 boinc_task_state.xml
[2025-11-26 03:04:02] -rw------- 1 boinc boinc 917694175 Nov 26 03:03 HITS.47556137._001151.pool.root.1
[2025-11-26 03:04:02] -rw------- 1 boinc boinc      1037 Nov 26 03:03 memory_monitor_summary.json
[2025-11-26 03:04:02] -rw------- 1 boinc boinc   1516240 Nov 26 03:03 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:04:02] -rw------- 1 boinc boinc   1170410 Nov 26 03:03 log.47556137._001151.job.log.tgz.1
[2025-11-26 03:04:02] -rw------- 1 boinc boinc      8566 Nov 26 03:03 heartbeat.json
[2025-11-26 03:04:02] -rw------- 1 boinc boinc        95 Nov 26 03:03 pilot_heartbeat.json
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc      8192 Nov 26 03:04 boinc_mmap_file
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc        28 Nov 26 03:04 wrapper_checkpoint.txt
[2025-11-26 03:04:02] -rw------- 1 boinc boinc      4752 Nov 26 03:04 pilotlog.txt
[2025-11-26 03:04:02] -rw------- 1 boinc boinc   4122858 Nov 26 03:04 log.47556137._001151.job.log.1
[2025-11-26 03:04:02] -rw------- 1 boinc boinc       353 Nov 26 03:04 output.list
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc       620 Nov 26 03:04 runtime_log
[2025-11-26 03:04:02] -rw------- 1 boinc boinc   5314560 Nov 26 03:04 result.tar.gz
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc      8903 Nov 26 03:04 runtime_log.err
[2025-11-26 03:04:02] -rw------- 1 boinc boinc       666 Nov 26 03:04 nfnNDmpslg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdmHKDmYk9Ayn.diag
[2025-11-26 03:04:02] -rw-r--r-- 1 boinc boinc      8590 Nov 26 03:04 stderr.txt
[2025-11-26 03:04:02] HITS file was successfully produced:
[2025-11-26 03:04:02] -rw------- 1 boinc boinc 917694175 Nov 26 03:03 shared/HITS.pool.root.1
[2025-11-26 03:04:02]  *** Contents of shared directory: ***
[2025-11-26 03:04:02] total 1302144
[2025-11-26 03:04:02] -rw-r--r-- 2 boinc boinc 409763229 Nov 25 18:55 ATLAS.root_0
[2025-11-26 03:04:02] -rw-r--r-- 2 boinc boinc    590099 Nov 25 18:55 input.tar.gz
[2025-11-26 03:04:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 18:55 start_atlas.sh
[2025-11-26 03:04:02] -rw------- 1 boinc boinc 917694175 Nov 26 03:03 HITS.pool.root.1
[2025-11-26 03:04:02] -rw------- 1 boinc boinc   5314560 Nov 26 03:04 result.tar.gz
03:04:04 (1479952): run_atlas exited; CPU time 86381.535862
03:04:04 (1479952): called boinc_finish(0)

</stderr_txt>
]]>

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