Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:57 (2272765): wrapper (7.7.26015): starting
00:01:57 (2272765): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:01:57] Arguments: --nthreads 12
[2025-11-23 00:01:57] Threads: 12
[2025-11-23 00:01:57] Checking for CVMFS
[2025-11-23 00:01:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:01:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:01:59] 2.13.3.0 12525 25148 246228 153197 2 551 40589250 40960000 39804 16776704 0 198058674 99.729 145740724 35640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:01:59] CVMFS is ok
[2025-11-23 00:01:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:01:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:01:59] Further information can be found at the LHC@home message board.
[2025-11-23 00:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:01:59] Checking for apptainer binary...
[2025-11-23 00:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:01:59] Running /usr/bin/apptainer --version
[2025-11-23 00:01:59] apptainer version 1.4.4-1.el9
[2025-11-23 00:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:02:00] c7-4-30.aglt2.org
[2025-11-23 00:02:00] apptainer works
[2025-11-23 00:02:00] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:02:00] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:02:00] Starting ATLAS job with PandaID=6894286238
[2025-11-23 00:02:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:38:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:38:15] 2025-11-24 03:37:14,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:38:15] 2025-11-24 03:37:15,007 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:38:15] 2025-11-24 03:37:15,033 | INFO     | sum of square deviations: 731164270986.1814
[2025-11-23 22:38:15] 2025-11-24 03:37:15,138 | INFO     | sum of deviations: 4457537056020.457
[2025-11-23 22:38:15] 2025-11-24 03:37:15,138 | INFO     | mean x: 1763914796.8842976
[2025-11-23 22:38:15] 2025-11-24 03:37:15,186 | INFO     | mean y: 3548070.003005259
[2025-11-23 22:38:15] 2025-11-24 03:37:15,187 | INFO     | intersect: -10750144202.418161
[2025-11-23 22:38:15] 2025-11-24 03:37:15,188 | INFO     | chi2: 12.817505391753064
[2025-11-23 22:38:15] 2025-11-24 03:37:15,207 | INFO     | sum of square deviations: 722955979665.8619
[2025-11-23 22:38:15] 2025-11-24 03:37:15,431 | INFO     | sum of deviations: 5058393403078.191
[2025-11-23 22:38:15] 2025-11-24 03:37:15,431 | INFO     | mean x: 1763914644.3914027
[2025-11-23 22:38:15] 2025-11-24 03:37:15,432 | INFO     | mean y: 3559232.5256410255
[2025-11-23 22:38:15] 2025-11-24 03:37:15,432 | INFO     | intersect: -12338235360.426409
[2025-11-23 22:38:15] 2025-11-24 03:37:15,457 | INFO     | chi2: 9.107546850102233
[2025-11-23 22:38:15] 2025-11-24 03:37:15,457 | INFO     | current chi2=9.107546850102233 (change=28.944466401690477 %)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,459 | INFO     | sum of square deviations: 714809363920.4078
[2025-11-23 22:38:15] 2025-11-24 03:37:15,675 | INFO     | sum of deviations: 5597037530174.725
[2025-11-23 22:38:15] 2025-11-24 03:37:15,676 | INFO     | mean x: 1763914491.8985617
[2025-11-23 22:38:15] 2025-11-24 03:37:15,676 | INFO     | mean y: 3569310.386071158
[2025-11-23 22:38:15] 2025-11-24 03:37:15,676 | INFO     | intersect: -13808079094.760773
[2025-11-23 22:38:15] 2025-11-24 03:37:15,677 | INFO     | chi2: 5.980301080897575
[2025-11-23 22:38:15] 2025-11-24 03:37:15,677 | INFO     | current chi2=5.980301080897575 (change=34.336861733185096 %)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,701 | INFO     | sum of square deviations: 706724030396.9362
[2025-11-23 22:38:15] 2025-11-24 03:37:15,795 | INFO     | time since job start (81274s) is within the limit (172800.0s)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,819 | INFO     | sum of deviations: 5810100197529.381
[2025-11-23 22:38:15] 2025-11-24 03:37:15,820 | INFO     | mean x: 1763914339.4042554
[2025-11-23 22:38:15] 2025-11-24 03:37:15,820 | INFO     | mean y: 3573326.717325228
[2025-11-23 22:38:15] 2025-11-24 03:37:15,820 | INFO     | intersect: -14497870816.962667
[2025-11-23 22:38:15] 2025-11-24 03:37:15,821 | INFO     | chi2: 5.341093458426531
[2025-11-23 22:38:15] 2025-11-24 03:37:15,821 | INFO     | current chi2=5.341093458426531 (change=10.6885525297851 %)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,821 | INFO     | right removable region: 1315
[2025-11-23 22:38:15] 2025-11-24 03:37:15,823 | INFO     | sum of square deviations: 722954449785.8623
[2025-11-23 22:38:15] 2025-11-24 03:37:15,914 | INFO     | sum of deviations: 3823432662099.604
[2025-11-23 22:38:15] 2025-11-24 03:37:15,914 | INFO     | mean x: 1763914949.3914027
[2025-11-23 22:38:15] 2025-11-24 03:37:15,914 | INFO     | mean y: 3559847.702111614
[2025-11-23 22:38:15] 2025-11-24 03:37:15,914 | INFO     | intersect: -9325119203.469757
[2025-11-23 22:38:15] 2025-11-24 03:37:15,915 | INFO     | chi2: 9.010290814385552
[2025-11-23 22:38:15] 2025-11-24 03:37:15,916 | INFO     | current chi2=9.010290814385552 (change=29.703241473314453 %)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,917 | INFO     | sum of square deviations: 714806627471.5837
[2025-11-23 22:38:15] 2025-11-24 03:37:15,951 | INFO     | sum of deviations: 3527260901374.7393
[2025-11-23 22:38:15] 2025-11-24 03:37:15,951 | INFO     | mean x: 1763915101.8955338
[2025-11-23 22:38:15] 2025-11-24 03:37:15,951 | INFO     | mean y: 3565385.9545798637
[2025-11-23 22:38:15] 2025-11-24 03:37:15,951 | INFO     | intersect: -8700591141.340483
[2025-11-23 22:38:15] 2025-11-24 03:37:15,952 | INFO     | chi2: 8.111947892592482
[2025-11-23 22:38:15] 2025-11-24 03:37:15,953 | INFO     | current chi2=8.111947892592482 (change=9.970187869616852 %)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,953 | INFO     | left removable region: 20
[2025-11-23 22:38:15] 2025-11-24 03:37:15,954 | INFO     | sum of square deviations: 673427411610.4875
[2025-11-23 22:38:15] 2025-11-24 03:37:15,984 | INFO     | sum of deviations: 4611128333990.458
[2025-11-23 22:38:15] 2025-11-24 03:37:15,984 | INFO     | mean x: 1763914918.9189188
[2025-11-23 22:38:15] 2025-11-24 03:37:15,984 | INFO     | mean y: 3597330.9281853284
[2025-11-23 22:38:15] 2025-11-24 03:37:15,984 | INFO     | intersect: -12074375619.302757
[2025-11-23 22:38:15] 2025-11-24 03:37:15,985 | INFO     | chi2: 0.2832111181333792
[2025-11-23 22:38:15] 2025-11-24 03:37:15,986 | INFO     | current memory leak: 6.85 B/s (using 1295 data points, chi2=0.28)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | could have reported an average CPU frequency of 3189 MHz (48 samples)
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | ..............................
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . Timing measurements:
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . get job = 0 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . initial setup = 3 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . payload setup = 20 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . stage-in = 0 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . payload execution = 81196 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . stage-out = 4 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | . log creation = 1 s
[2025-11-23 22:38:15] 2025-11-24 03:37:15,987 | INFO     | ..............................
[2025-11-23 22:38:15] 2025-11-24 03:37:16,258 | INFO     | 
[2025-11-23 22:38:15] 2025-11-24 03:37:16,259 | INFO     | job summary report
[2025-11-23 22:38:15] 2025-11-24 03:37:16,259 | INFO     | --------------------------------------------------
[2025-11-23 22:38:15] 2025-11-24 03:37:16,259 | INFO     | PanDA job id: 6894286238
[2025-11-23 22:38:15] 2025-11-24 03:37:16,259 | INFO     | task id: 47533967
[2025-11-23 22:38:15] 2025-11-24 03:37:16,259 | INFO     | errors: (none)
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | pilot state: finished 
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | transexitcode: 0
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | exeerrorcode: 0
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | exeerrordiag: 
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | exitcode: 0
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | exitmsg: OK
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | cpuconsumptiontime: 202260 s
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | nevents: 1000
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | neventsw: 0
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | pid: 2292008
[2025-11-23 22:38:15] 2025-11-24 03:37:16,262 | INFO     | pgrp: 2292008
[2025-11-23 22:38:15] 2025-11-24 03:37:16,263 | INFO     | corecount: 12
[2025-11-23 22:38:15] 2025-11-24 03:37:16,263 | INFO     | event service: False
[2025-11-23 22:38:15] 2025-11-24 03:37:16,263 | INFO     | sizes: {0: 2298585, 1: 2298784, 12: 2298784, 13: 2299074, 22: 2299130, 81221: 2361799, 81226: 2370793, 81227: 2370849, 81238: 2371095}
[2025-11-23 22:38:15] 2025-11-24 03:37:16,263 | INFO     | --------------------------------------------------
[2025-11-23 22:38:15] 2025-11-24 03:37:16,263 | INFO     | 
[2025-11-23 22:38:15] 2025-11-24 03:37:16,263 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 22:38:15] 2025-11-24 03:37:16,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:38:15] 2025-11-24 03:37:16,318 | INFO     | job 6894286238 has completed (purged errors)
[2025-11-23 22:38:15] 2025-11-24 03:37:16,319 | INFO     | overall cleanup function is called
[2025-11-23 22:38:15] 2025-11-24 03:37:17,359 | INFO     | --- collectZombieJob: --- 10, [2292008]
[2025-11-23 22:38:15] 2025-11-24 03:37:17,359 | INFO     | zombie collector waiting for pid 2292008
[2025-11-23 22:38:15] 2025-11-24 03:37:17,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:38:15] 2025-11-24 03:37:17,360 | INFO     | collected zombie processes
[2025-11-23 22:38:15] 2025-11-24 03:37:17,360 | INFO     | will attempt to kill all subprocesses of pid=2292008
[2025-11-23 22:38:15] 2025-11-24 03:37:18,072 | INFO     | process IDs to be killed: [2292008] (in reverse order)
[2025-11-23 22:38:15] 2025-11-24 03:37:18,281 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:38:15] 2025-11-24 03:37:18,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:38:15] 2025-11-24 03:37:18,308 | INFO     | did not find any defunct processes belonging to 2292008
[2025-11-23 22:38:15] 2025-11-24 03:37:18,335 | INFO     | did not find any defunct processes belonging to 2292008
[2025-11-23 22:38:15] 2025-11-24 03:37:18,336 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:38:15] 2025-11-24 03:37:18,336 | INFO     | ready for new job
[2025-11-23 22:38:15] 2025-11-24 03:37:18,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:38:15] 2025-11-24 03:37:18,342 | INFO     | ***************************************
[2025-11-23 22:38:15] 2025-11-24 03:37:18,342 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:38:15] 2025-11-24 03:37:18,342 | INFO     | ***************************************
[2025-11-23 22:38:15] 2025-11-24 03:37:18,342 | INFO     | 
[2025-11-23 22:38:15] 2025-11-24 03:37:18,348 | INFO     | architecture information:
[2025-11-23 22:38:15] 2025-11-24 03:37:18,348 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:38:15] 2025-11-24 03:37:18,382 | INFO     | cat /etc/os-release:
[2025-11-23 22:38:15] NAME="CentOS Linux"
[2025-11-23 22:38:15] VERSION="7 (Core)"
[2025-11-23 22:38:15] ID="centos"
[2025-11-23 22:38:15] ID_LIKE="rhel fedora"
[2025-11-23 22:38:15] VERSION_ID="7"
[2025-11-23 22:38:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:38:15] ANSI_COLOR="0;31"
[2025-11-23 22:38:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:38:15] HOME_URL="https://www.centos.org/"
[2025-11-23 22:38:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:38:15] 
[2025-11-23 22:38:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:38:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:38:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:38:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:38:15] 
[2025-11-23 22:38:15] 2025-11-24 03:37:18,382 | INFO     | ***************************************
[2025-11-23 22:38:15] 2025-11-24 03:37:18,885 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 22:38:15] 2025-11-24 03:37:18,906 | INFO     | sufficient remaining disk space (121634816000 B)
[2025-11-23 22:38:15] 2025-11-24 03:37:18,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:38:15] 2025-11-24 03:37:18,907 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:38:15] 2025-11-24 03:37:18,907 | INFO     | update_server=False
[2025-11-23 22:38:15] 2025-11-24 03:37:18,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:38:15] 2025-11-24 03:37:18,943 | INFO     | all data control threads have been joined
[2025-11-23 22:38:15] 2025-11-24 03:37:19,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:38:15] 2025-11-24 03:37:19,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:38:15] 2025-11-24 03:37:19,636 | INFO     | aborting loop
[2025-11-23 22:38:15] 2025-11-24 03:37:19,912 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:19,949 | INFO     | [data] control thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:20,016 | INFO     | all payload control threads have been joined
[2025-11-23 22:38:15] 2025-11-24 03:37:20,067 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:20,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:38:15] 2025-11-24 03:37:20,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:20,301 | INFO     | all job control threads have been joined
[2025-11-23 22:38:15] 2025-11-24 03:37:20,569 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:20,638 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:20,642 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:20,964 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:21,021 | INFO     | [payload] control thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:21,027 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:21,089 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:21,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:38:15] 2025-11-24 03:37:21,140 | INFO     | [job] validate thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:21,307 | INFO     | [job] control thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:21,373 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:22,121 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:24,143 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:38:15] 2025-11-24 03:37:49,613 | INFO     | PID=2277894 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 22:38:15] 2025-11-24 03:37:49,613 | INFO     | .. there are 48 such processes running
[2025-11-23 22:38:15] 2025-11-24 03:37:49,613 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:38:15] 2025-11-24 03:37:49,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:38:15] 2025-11-24 03:37:49,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:38:15] 2025-11-24 03:38:08,659 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:38:15] 2025-11-24 03:38:09,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361163614016)>', '<ExcThread(monitor, started 140360890160896)>']
[2025-11-23 22:38:15] 2025-11-24 03:38:10,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:38:15] 2025-11-24 03:38:10,756 | INFO     | [monitor] control thread has ended
[2025-11-23 22:38:15] 2025-11-24 03:38:14,988 | INFO     | all workflow threads have been joined
[2025-11-23 22:38:15] 2025-11-24 03:38:14,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:38:15] 2025-11-24 03:38:14,993 | INFO     | traces error code: 0
[2025-11-23 22:38:15] 2025-11-24 03:38:14,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:38:15] 2025-11-24 03:38:15,176 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:38:15] 2025-11-24 03:38:15,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:38:15] 2025-11-24 03:38:15,182 [wrapper] pilotpid: 2277894
[2025-11-23 22:38:15] 2025-11-24 03:38:15,188 [wrapper] Pilot exit status: 0
[2025-11-23 22:38:15] 2025-11-24 03:38:15,209 [wrapper] pandaids: 6894286238
[2025-11-23 22:38:15] 2025-11-24 03:38:15,407 [wrapper] cleanup supervisor_pilot 1236796 2277895
[2025-11-23 22:38:15] 2025-11-24 03:38:15,438 [wrapper] Test setup, not cleaning
[2025-11-23 22:38:15] 2025-11-24 03:38:15,451 [wrapper] apfmon messages muted
[2025-11-23 22:38:15] 2025-11-24 03:38:15,454 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:38:15] 2025-11-24 03:38:15,461 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:38:15]  *** Error codes and diagnostics ***
[2025-11-23 22:38:15]     "exeErrorCode": 0,
[2025-11-23 22:38:15]     "exeErrorDiag": "",
[2025-11-23 22:38:15]     "pilotErrorCode": 0,
[2025-11-23 22:38:15]     "pilotErrorDiag": "",
[2025-11-23 22:38:15]  *** Listing of results directory ***
[2025-11-23 22:38:15] total 1328352
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:18 pilot3.tar.gz
[2025-11-23 22:38:15] -rwx------. 1 boincer umatlas     36292 Nov 21 05:21 runpilot2-wrapper.sh
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 05:21 queuedata.json
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:38:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:01 run_atlas
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:01 job.xml
[2025-11-23 22:38:15] -rw-r--r--. 2 boincer umatlas 409485007 Nov 23 00:01 EVNT.47493127._002368.pool.root.1
[2025-11-23 22:38:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:01 start_atlas.sh
[2025-11-23 22:38:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:01 shared
[2025-11-23 22:38:15] -rw-r--r--. 2 boincer umatlas    590102 Nov 23 00:01 input.tar.gz
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:01 boinc_lockfile
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:02 pandaJob.out
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas        57 Nov 23 00:02 setup.sh.local
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas    989784 Nov 23 00:02 agis_schedconf.cvmfs.json
[2025-11-23 22:38:15] drwx------. 5 boincer umatlas      4096 Nov 23 00:02 pilot3
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas       533 Nov 23 22:18 boinc_task_state.xml
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas      6949 Nov 23 22:31 init_data.xml
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas 921709654 Nov 23 22:35 HITS.47533967._003399.pool.root.1
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas      1065 Nov 23 22:36 memory_monitor_summary.json
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas        95 Nov 23 22:36 pilot_heartbeat.json
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas   1526164 Nov 23 22:37 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas   2792404 Nov 23 22:37 log.47533967._003399.job.log.tgz.1
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas      8638 Nov 23 22:37 heartbeat.json
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 22:38 boinc_mmap_file
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas        29 Nov 23 22:38 wrapper_checkpoint.txt
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas      4825 Nov 23 22:38 pilotlog.txt
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas   9766446 Nov 23 22:38 log.47533967._003399.job.log.1
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas       353 Nov 23 22:38 output.list
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas       620 Nov 23 22:38 runtime_log
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas  12574720 Nov 23 22:38 result.tar.gz
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas      9340 Nov 23 22:38 runtime_log.err
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas       664 Nov 23 22:38 50CNDm6Rdg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoWHKDmxAGR9m.diag
[2025-11-23 22:38:15] -rw-r--r--. 1 boincer umatlas     21163 Nov 23 22:38 stderr.txt
[2025-11-23 22:38:15] HITS file was successfully produced:
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas 921709654 Nov 23 22:35 shared/HITS.pool.root.1
[2025-11-23 22:38:15]  *** Contents of shared directory: ***
[2025-11-23 22:38:15] total 1312880
[2025-11-23 22:38:15] -rw-r--r--. 2 boincer umatlas 409485007 Nov 23 00:01 ATLAS.root_0
[2025-11-23 22:38:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:01 start_atlas.sh
[2025-11-23 22:38:15] -rw-r--r--. 2 boincer umatlas    590102 Nov 23 00:01 input.tar.gz
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas 921709654 Nov 23 22:35 HITS.pool.root.1
[2025-11-23 22:38:15] -rw-------. 1 boincer umatlas  12574720 Nov 23 22:38 result.tar.gz
22:38:17 (2272765): run_atlas exited; CPU time 203342.753092
22:38:17 (2272765): called boinc_finish(0)

</stderr_txt>
]]>

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