Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
08:08:21 (3651189): wrapper (7.7.26015): starting
08:08:21 (3651189): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 08:08:21] Arguments: --nthreads 3
[2025-11-24 08:08:21] Threads: 3
[2025-11-24 08:08:21] Checking for CVMFS
[2025-11-24 08:08:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:08:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:08:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:08:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:08:21] 2.12.7.0 3613689 3381 45600 153236 2 90 4554470 6144000 6648 130560 0 12279989 99.955 585320 714 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 08:08:21] CVMFS is ok
[2025-11-24 08:08:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:08:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 08:08:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 08:08:21] Further information can be found at the LHC@home message board.
[2025-11-24 08:08:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:08:21] Checking for apptainer binary...
[2025-11-24 08:08:21] apptainer is not installed, using version from CVMFS
[2025-11-24 08:08:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:08:21] biggy
[2025-11-24 08:08:21] apptainer works
[2025-11-24 08:08:21] Set ATHENA_PROC_NUMBER=3
[2025-11-24 08:08:21] Set ATHENA_CORE_NUMBER=3
[2025-11-24 08:08:21] Starting ATLAS job with PandaID=6894285612
[2025-11-24 08:08:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:08:27]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:08:27] 2025-11-24 16:07:33,347 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:08:27] 2025-11-24 16:07:33,347 | INFO     | job 6894285612 has state=finished
[2025-11-24 17:08:27] 2025-11-24 16:07:33,347 | INFO     | preparing for final server update for job 6894285612 in state='finished'
[2025-11-24 17:08:27] 2025-11-24 16:07:33,348 | INFO     | this job has now completed (state=finished)
[2025-11-24 17:08:27] 2025-11-24 16:07:33,348 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-24 17:08:27] 2025-11-24 16:07:33,348 | INFO     | log transfer has been attempted: DONE
[2025-11-24 17:08:27] 2025-11-24 16:07:33,348 | INFO     | job 6894285612 has finished - writing final server update
[2025-11-24 17:08:27] 2025-11-24 16:07:33,348 | INFO     | total number of processed events: 1000 (read)
[2025-11-24 17:08:27] 2025-11-24 16:07:33,349 | INFO     | executing command: lscpu
[2025-11-24 17:08:27] 2025-11-24 16:07:33,366 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-24 17:08:27] 2025-11-24 16:07:33,530 | INFO     | monitor loop #2428: job 0:6894285612 is in state 'finished'
[2025-11-24 17:08:27] 2025-11-24 16:07:33,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:08:27] 2025-11-24 16:07:34,498 | INFO     | time since job start (32347s) is within the limit (172800.0s)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,411 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 17:08:27] 2025-11-24 16:07:35,415 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5149.26159375
[2025-11-24 17:08:27] 2025-11-24 16:07:35,419 | INFO     | using path: /single_8TB/boinc-client/slots/4/PanDA_Pilot-6894285612/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,419 | INFO     | extracted standard info from prmon json
[2025-11-24 17:08:27] 2025-11-24 16:07:35,419 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:08:27] 2025-11-24 16:07:35,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:08:27] 2025-11-24 16:07:35,423 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:08:27] 2025-11-24 16:07:35,423 | INFO     | sum of square deviations: 46164112072.5
[2025-11-24 17:08:27] 2025-11-24 16:07:35,426 | INFO     | sum of deviations: 4152876774228.5
[2025-11-24 17:08:27] 2025-11-24 16:07:35,426 | INFO     | mean x: 1763984259.5
[2025-11-24 17:08:27] 2025-11-24 16:07:35,426 | INFO     | mean y: 3127716.8320754715
[2025-11-24 17:08:27] 2025-11-24 16:07:35,426 | INFO     | intersect: -158683109979.61615
[2025-11-24 17:08:27] 2025-11-24 16:07:35,427 | INFO     | chi2: 8.613082576353312
[2025-11-24 17:08:27] 2025-11-24 16:07:35,427 | INFO     | sum of square deviations: 44869864550.0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,429 | INFO     | sum of deviations: 4226245286942.0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | mean x: 1763984107.0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | mean y: 3136293.6114285714
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | intersect: -166144668992.09326
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | chi2: 6.85149126289575
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | current chi2=6.85149126289575 (change=20.452506960677503 %)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | right removable region: 524
[2025-11-24 17:08:27] 2025-11-24 16:07:35,430 | INFO     | sum of square deviations: 44869864550.0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | sum of deviations: 4015004481051.016
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | mean x: 1763984412.0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | mean y: 3143927.340952381
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | intersect: -157840107656.17966
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | chi2: 7.06358923044201
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | current chi2=7.06358923044201 (change=17.98999756678684 %)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,433 | INFO     | left removable region: 10
[2025-11-24 17:08:27] 2025-11-24 16:07:35,434 | INFO     | sum of square deviations: 42108147652.5
[2025-11-24 17:08:27] 2025-11-24 16:07:35,436 | INFO     | sum of deviations: 3979741984771.4995
[2025-11-24 17:08:27] 2025-11-24 16:07:35,436 | INFO     | mean x: 1763984381.5
[2025-11-24 17:08:27] 2025-11-24 16:07:35,436 | INFO     | mean y: 3162309.212062257
[2025-11-24 17:08:27] 2025-11-24 16:07:35,436 | INFO     | intersect: -166715230565.04535
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | chi2: 5.10575080319694
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | current memory leak: 94.51 B/s (using 514 data points, chi2=5.11)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | could have reported an average CPU frequency of 5118 MHz (21 samples)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | ..............................
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | . Timing measurements:
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | . get job = 0 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | . initial setup = 1 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | . payload setup = 2 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,437 | INFO     | . stage-in = 0 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,438 | INFO     | . payload execution = 32322 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,438 | INFO     | . stage-out = 3 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,438 | INFO     | . log creation = 0 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,438 | INFO     | ..............................
[2025-11-24 17:08:27] 2025-11-24 16:07:35,655 | INFO     | PID=3655045 has CPU usage=15.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 17:08:27] 2025-11-24 16:07:35,655 | INFO     | .. there are 10 such processes running
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | 
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | job summary report
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | --------------------------------------------------
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | PanDA job id: 6894285612
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | task id: 47533967
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | errors: (none)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | pilot state: finished 
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | transexitcode: 0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | exeerrorcode: 0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | exeerrordiag: 
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | exitcode: 0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,737 | INFO     | exitmsg: OK
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | cpuconsumptiontime: 96017 s
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | nevents: 1000
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | neventsw: 0
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | pid: 3661780
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | pgrp: 3661780
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | corecount: 3
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | event service: False
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | sizes: {0: 2298816, 2: 2299078, 11: 2299106, 32328: 2339710, 32332: 2349571, 32335: 2349761}
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | --------------------------------------------------
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | 
[2025-11-24 17:08:27] 2025-11-24 16:07:35,738 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/4
[2025-11-24 17:08:27] 2025-11-24 16:07:35,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:08:27] 2025-11-24 16:07:35,751 | INFO     | job 6894285612 has completed (purged errors)
[2025-11-24 17:08:27] 2025-11-24 16:07:35,752 | INFO     | overall cleanup function is called
[2025-11-24 17:08:27] 2025-11-24 16:07:36,762 | INFO     | --- collectZombieJob: --- 10, [3661780]
[2025-11-24 17:08:27] 2025-11-24 16:07:36,762 | INFO     | zombie collector waiting for pid 3661780
[2025-11-24 17:08:27] 2025-11-24 16:07:36,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:08:27] 2025-11-24 16:07:36,762 | INFO     | collected zombie processes
[2025-11-24 17:08:27] 2025-11-24 16:07:36,762 | INFO     | will attempt to kill all subprocesses of pid=3661780
[2025-11-24 17:08:27] 2025-11-24 16:07:36,891 | INFO     | process IDs to be killed: [3661780] (in reverse order)
[2025-11-24 17:08:27] 2025-11-24 16:07:36,949 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:08:27] 2025-11-24 16:07:36,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:08:27] 2025-11-24 16:07:36,954 | INFO     | did not find any defunct processes belonging to 3661780
[2025-11-24 17:08:27] 2025-11-24 16:07:36,959 | INFO     | did not find any defunct processes belonging to 3661780
[2025-11-24 17:08:27] 2025-11-24 16:07:36,960 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:08:27] 2025-11-24 16:07:36,960 | INFO     | ready for new job
[2025-11-24 17:08:27] 2025-11-24 16:07:36,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:08:27] 2025-11-24 16:07:36,962 | INFO     | ***************************************
[2025-11-24 17:08:27] 2025-11-24 16:07:36,962 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:08:27] 2025-11-24 16:07:36,962 | INFO     | ***************************************
[2025-11-24 17:08:27] 2025-11-24 16:07:36,962 | INFO     | 
[2025-11-24 17:08:27] 2025-11-24 16:07:36,963 | INFO     | architecture information:
[2025-11-24 17:08:27] 2025-11-24 16:07:36,963 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:08:27] 2025-11-24 16:07:36,971 | INFO     | cat /etc/os-release:
[2025-11-24 17:08:27] NAME="CentOS Linux"
[2025-11-24 17:08:27] VERSION="7 (Core)"
[2025-11-24 17:08:27] ID="centos"
[2025-11-24 17:08:27] ID_LIKE="rhel fedora"
[2025-11-24 17:08:27] VERSION_ID="7"
[2025-11-24 17:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:08:27] ANSI_COLOR="0;31"
[2025-11-24 17:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:08:27] HOME_URL="https://www.centos.org/"
[2025-11-24 17:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:08:27] 
[2025-11-24 17:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:08:27] 
[2025-11-24 17:08:27] 2025-11-24 16:07:36,972 | INFO     | ***************************************
[2025-11-24 17:08:27] 2025-11-24 16:07:37,474 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/4
[2025-11-24 17:08:27] 2025-11-24 16:07:37,485 | INFO     | sufficient remaining disk space (946860982272 B)
[2025-11-24 17:08:27] 2025-11-24 16:07:37,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:08:27] 2025-11-24 16:07:37,485 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:08:27] 2025-11-24 16:07:37,485 | INFO     | update_server=False
[2025-11-24 17:08:27] 2025-11-24 16:07:37,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:08:27] 2025-11-24 16:07:37,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:08:27] 2025-11-24 16:07:37,486 | INFO     | aborting loop
[2025-11-24 17:08:27] 2025-11-24 16:07:37,586 | INFO     | all data control threads have been joined
[2025-11-24 17:08:27] 2025-11-24 16:07:37,694 | INFO     | all job control threads have been joined
[2025-11-24 17:08:27] 2025-11-24 16:07:37,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:08:27] 2025-11-24 16:07:38,283 | INFO     | all payload control threads have been joined
[2025-11-24 17:08:27] 2025-11-24 16:07:38,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:08:27] 2025-11-24 16:07:38,490 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:38,491 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:38,591 | INFO     | [data] control thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:38,699 | INFO     | [job] control thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:38,755 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:38,802 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,260 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,288 | INFO     | [payload] control thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,461 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,595 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,596 | INFO     | [job] validate thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,765 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:39,819 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:40,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:08:27] 2025-11-24 16:07:41,493 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:42,417 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:07:48,096 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:08:27] 2025-11-24 16:07:49,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:08:27] 2025-11-24 16:08:07,845 | INFO     | PID=3655045 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 17:08:27] 2025-11-24 16:08:07,845 | INFO     | .. there are 10 such processes running
[2025-11-24 17:08:27] 2025-11-24 16:08:07,845 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:08:27] 2025-11-24 16:08:07,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:08:27] 2025-11-24 16:08:07,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:08:27] 2025-11-24 16:08:20,215 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:08:27] 2025-11-24 16:08:21,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123497826563904)>', '<ExcThread(monitor, started 123497103726336)>']
[2025-11-24 17:08:27] 2025-11-24 16:08:21,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:08:27] 2025-11-24 16:08:21,915 | INFO     | [monitor] control thread has ended
[2025-11-24 17:08:27] 2025-11-24 16:08:26,018 [wrapper] supervise_pilot (15 min periods counter: 37)
[2025-11-24 17:08:27] 2025-11-24 16:08:26,210 | INFO     | all workflow threads have been joined
[2025-11-24 17:08:27] 2025-11-24 16:08:26,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:08:27] 2025-11-24 16:08:26,210 | INFO     | traces error code: 0
[2025-11-24 17:08:27] 2025-11-24 16:08:26,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:08:27] 2025-11-24 16:08:26,278 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:08:27] 2025-11-24 16:08:26,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:08:27] 2025-11-24 16:08:26,281 [wrapper] pilotpid: 3655045
[2025-11-24 17:08:27] 2025-11-24 16:08:26,282 [wrapper] Pilot exit status: 0
[2025-11-24 17:08:27] 2025-11-24 16:08:26,287 [wrapper] pandaids: 6894285612
[2025-11-24 17:08:27] 2025-11-24 16:08:26,322 [wrapper] cleanup supervisor_pilot  131704 3655046
[2025-11-24 17:08:27] 2025-11-24 16:08:26,324 [wrapper] Test setup, not cleaning
[2025-11-24 17:08:27] 2025-11-24 16:08:26,325 [wrapper] apfmon messages muted
[2025-11-24 17:08:27] 2025-11-24 16:08:26,327 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:08:27] 2025-11-24 16:08:26,328 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:08:27]  *** Error codes and diagnostics ***
[2025-11-24 17:08:27]     "exeErrorCode": 0,
[2025-11-24 17:08:27]     "exeErrorDiag": "",
[2025-11-24 17:08:27]     "pilotErrorCode": 0,
[2025-11-24 17:08:27]     "pilotErrorDiag": "",
[2025-11-24 17:08:27]  *** Listing of results directory ***
[2025-11-24 17:08:27] total 1307128
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc    576529 Nov 21 10:54 pilot3.tar.gz
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc      5112 Nov 21 11:02 queuedata.json
[2025-11-24 17:08:27] -rwx------ 1 boinc boinc     36292 Nov 21 11:02 runpilot2-wrapper.sh
[2025-11-24 17:08:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 08:08 run_atlas
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc       105 Nov 24 08:08 job.xml
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc       100 Nov 24 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:08:27] -rw-r--r-- 2 boinc boinc 410732389 Nov 24 08:08 EVNT.47493127._002362.pool.root.1
[2025-11-24 17:08:27] -rw-r--r-- 2 boinc boinc    590109 Nov 24 08:08 input.tar.gz
[2025-11-24 17:08:27] drwxrwx--x 2 boinc boinc         5 Nov 24 08:08 shared
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc         0 Nov 24 08:08 boinc_setup_complete
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc      6806 Nov 24 08:08 init_data.xml
[2025-11-24 17:08:27] -rw-r--r-- 2 boinc boinc     15847 Nov 24 08:08 start_atlas.sh
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc         0 Nov 24 08:08 boinc_lockfile
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc      2785 Nov 24 08:08 pandaJob.out
[2025-11-24 17:08:27] -rw------- 1 boinc boinc    989786 Nov 24 08:08 agis_schedconf.cvmfs.json
[2025-11-24 17:08:27] drwx------ 5 boinc boinc        22 Nov 24 08:08 pilot3
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc       531 Nov 24 17:03 boinc_task_state.xml
[2025-11-24 17:08:27] -rw------- 1 boinc boinc 915997633 Nov 24 17:07 HITS.47533967._003335.pool.root.1
[2025-11-24 17:08:27] -rw------- 1 boinc boinc      1062 Nov 24 17:07 memory_monitor_summary.json
[2025-11-24 17:08:27] -rw------- 1 boinc boinc   1516227 Nov 24 17:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:08:27] -rw------- 1 boinc boinc   1228776 Nov 24 17:07 log.47533967._003335.job.log.tgz.1
[2025-11-24 17:08:27] -rw------- 1 boinc boinc      8601 Nov 24 17:07 heartbeat.json
[2025-11-24 17:08:27] -rw------- 1 boinc boinc        95 Nov 24 17:08 pilot_heartbeat.json
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc        28 Nov 24 17:08 wrapper_checkpoint.txt
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc      8192 Nov 24 17:08 boinc_mmap_file
[2025-11-24 17:08:27] -rw------- 1 boinc boinc      4907 Nov 24 17:08 pilotlog.txt
[2025-11-24 17:08:27] -rw------- 1 boinc boinc   4665309 Nov 24 17:08 log.47533967._003335.job.log.1
[2025-11-24 17:08:27] -rw------- 1 boinc boinc       353 Nov 24 17:08 output.list
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc       620 Nov 24 17:08 runtime_log
[2025-11-24 17:08:27] -rw------- 1 boinc boinc   5908480 Nov 24 17:08 result.tar.gz
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc      8940 Nov 24 17:08 runtime_log.err
[2025-11-24 17:08:27] -rw------- 1 boinc boinc       661 Nov 24 17:08 ZpLMDmM9cg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKWHKDmmzfWKn.diag
[2025-11-24 17:08:27] -rw-r--r-- 1 boinc boinc     21862 Nov 24 17:08 stderr.txt
[2025-11-24 17:08:27] HITS file was successfully produced:
[2025-11-24 17:08:27] -rw------- 1 boinc boinc 915997633 Nov 24 17:07 shared/HITS.pool.root.1
[2025-11-24 17:08:27]  *** Contents of shared directory: ***
[2025-11-24 17:08:27] total 1298056
[2025-11-24 17:08:27] -rw-r--r-- 2 boinc boinc 410732389 Nov 24 08:08 ATLAS.root_0
[2025-11-24 17:08:27] -rw-r--r-- 2 boinc boinc    590109 Nov 24 08:08 input.tar.gz
[2025-11-24 17:08:27] -rw-r--r-- 2 boinc boinc     15847 Nov 24 08:08 start_atlas.sh
[2025-11-24 17:08:27] -rw------- 1 boinc boinc 915997633 Nov 24 17:07 HITS.pool.root.1
[2025-11-24 17:08:27] -rw------- 1 boinc boinc   5908480 Nov 24 17:08 result.tar.gz
17:08:28 (3651189): run_atlas exited; CPU time 96231.009117
17:08:28 (3651189): called boinc_finish(0)

</stderr_txt>
]]>

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