Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:54:28 (3073201): wrapper (7.7.26015): starting
23:54:28 (3073201): wrapper: running run_atlas (--nthreads 2)
[2025-11-25 23:54:28] Arguments: --nthreads 2
[2025-11-25 23:54:28] Threads: 2
[2025-11-25 23:54:28] Checking for CVMFS
[2025-11-25 23:54:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:54:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:54:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:54:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:54:28] 2.9.2.0 1870311 10293 57416 153300 3 81 33727399 36864001 0 130560 1 3311283 99.920 531611 751 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 23:54:28] CVMFS is ok
[2025-11-25 23:54:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:54:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:54:28] Further information can be found at the LHC@home message board.
[2025-11-25 23:54:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:54:28] Checking for apptainer binary...
[2025-11-25 23:54:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:54:28] Running /usr/bin/apptainer --version
[2025-11-25 23:54:28] apptainer version 1.4.1-1.1
[2025-11-25 23:54:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:54:28] legendA269
[2025-11-25 23:54:28] apptainer works
[2025-11-25 23:54:29] Set ATHENA_PROC_NUMBER=2
[2025-11-25 23:54:29] Set ATHENA_CORE_NUMBER=2
[2025-11-25 23:54:29] Starting ATLAS job with PandaID=6895336384
[2025-11-25 23:54:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:39:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:39:02] 2025-11-26 10:38:23,979 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 11:39:02] 2025-11-26 10:38:24,725 | INFO     | monitor loop #3222: job 0:6895336384 is in state 'finished'
[2025-11-26 11:39:02] 2025-11-26 10:38:24,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:39:02] 2025-11-26 10:38:25,704 | INFO     | time since job start (42222s) is within the limit (172800.0s)
[2025-11-26 11:39:02] 2025-11-26 10:38:27,229 | INFO     | monitor loop #3223: job 0:6895336384 is in state 'finished'
[2025-11-26 11:39:02] 2025-11-26 10:38:27,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:39:02] 2025-11-26 10:38:27,710 | INFO     | time since job start (42224s) is within the limit (172800.0s)
[2025-11-26 11:39:02] 2025-11-26 10:38:29,715 | INFO     | time since job start (42226s) is within the limit (172800.0s)
[2025-11-26 11:39:02] 2025-11-26 10:38:29,734 | INFO     | monitor loop #3224: job 0:6895336384 is in state 'finished'
[2025-11-26 11:39:02] 2025-11-26 10:38:29,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,252 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 11:39:02] 2025-11-26 10:38:30,253 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4400.666375000001
[2025-11-26 11:39:02] 2025-11-26 10:38:30,253 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895336384/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,254 | INFO     | extracted standard info from prmon json
[2025-11-26 11:39:02] 2025-11-26 10:38:30,254 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:39:02] 2025-11-26 10:38:30,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:39:02] 2025-11-26 10:38:30,257 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:39:02] 2025-11-26 10:38:30,258 | INFO     | sum of square deviations: 102753305193.0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,262 | INFO     | sum of deviations: 273635186408.00006
[2025-11-26 11:39:02] 2025-11-26 10:38:30,262 | INFO     | mean x: 1764132387.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,262 | INFO     | mean y: 2019863.2052023122
[2025-11-26 11:39:02] 2025-11-26 10:38:30,262 | INFO     | intersect: -4695918502.818651
[2025-11-26 11:39:02] 2025-11-26 10:38:30,262 | INFO     | chi2: 2.9183142517697145
[2025-11-26 11:39:02] 2025-11-26 10:38:30,263 | INFO     | sum of square deviations: 100542045128.0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | sum of deviations: 324627123868.99994
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | mean x: 1764132235.0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | mean y: 2023365.2168850072
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | intersect: -5693953604.851266
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | chi2: 2.229632804824922
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | current chi2=2.229632804824922 (change=23.598604794777145 %)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,267 | INFO     | right removable region: 686
[2025-11-26 11:39:02] 2025-11-26 10:38:30,268 | INFO     | sum of square deviations: 100542045128.0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,272 | INFO     | sum of deviations: 148971101992.99997
[2025-11-26 11:39:02] 2025-11-26 10:38:30,272 | INFO     | mean x: 1764132540.0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,272 | INFO     | mean y: 2028450.227074236
[2025-11-26 11:39:02] 2025-11-26 10:38:30,272 | INFO     | intersect: -2611850829.93809
[2025-11-26 11:39:02] 2025-11-26 10:38:30,272 | INFO     | chi2: 1.000427755060893
[2025-11-26 11:39:02] 2025-11-26 10:38:30,272 | INFO     | current chi2=1.000427755060893 (change=65.71898470309641 %)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,273 | INFO     | sum of square deviations: 98362739150.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | sum of deviations: 116415151679.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | mean x: 1764132692.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | mean y: 2030720.0982404691
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | intersect: -2085871434.2523308
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | chi2: 0.7834787909433061
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | current chi2=0.7834787909433061 (change=21.685620277936206 %)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | left removable region: 20
[2025-11-26 11:39:02] 2025-11-26 10:38:30,277 | INFO     | sum of square deviations: 91600982602.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,281 | INFO     | sum of deviations: 142294753771.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,281 | INFO     | mean x: 1764132814.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,281 | INFO     | mean y: 2036176.5
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | intersect: -2738402160.8137493
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | chi2: 0.07108893141182887
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | current memory leak: 1.55 B/s (using 666 data points, chi2=0.07)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | could have reported an average CPU frequency of 4555 MHz (27 samples)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | ..............................
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . Timing measurements:
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . get job = 0 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . initial setup = 1 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . payload setup = 7 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . stage-in = 0 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . payload execution = 42187 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,282 | INFO     | . stage-out = 1 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,283 | INFO     | . log creation = 0 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,283 | INFO     | ..............................
[2025-11-26 11:39:02] 2025-11-26 10:38:30,655 | INFO     | 
[2025-11-26 11:39:02] 2025-11-26 10:38:30,655 | INFO     | job summary report
[2025-11-26 11:39:02] 2025-11-26 10:38:30,655 | INFO     | --------------------------------------------------
[2025-11-26 11:39:02] 2025-11-26 10:38:30,655 | INFO     | PanDA job id: 6895336384
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | task id: 47556137
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | errors: (none)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | pilot state: finished 
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | transexitcode: 0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | exeerrorcode: 0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,656 | INFO     | exeerrordiag: 
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | exitcode: 0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | exitmsg: OK
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | cpuconsumptiontime: 83590 s
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | nevents: 1000
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | neventsw: 0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | pid: 3083329
[2025-11-26 11:39:02] 2025-11-26 10:38:30,657 | INFO     | pgrp: 3083329
[2025-11-26 11:39:02] 2025-11-26 10:38:30,658 | INFO     | corecount: 2
[2025-11-26 11:39:02] 2025-11-26 10:38:30,658 | INFO     | event service: False
[2025-11-26 11:39:02] 2025-11-26 10:38:30,658 | INFO     | sizes: {0: 2284267, 7: 2284529, 11: 2284557, 42199: 2329970, 42200: 2338970, 42202: 2339026, 42209: 2339400}
[2025-11-26 11:39:02] 2025-11-26 10:38:30,658 | INFO     | --------------------------------------------------
[2025-11-26 11:39:02] 2025-11-26 10:38:30,658 | INFO     | 
[2025-11-26 11:39:02] 2025-11-26 10:38:30,659 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:39:02] 2025-11-26 10:38:30,671 | INFO     | job 6895336384 has completed (purged errors)
[2025-11-26 11:39:02] 2025-11-26 10:38:30,671 | INFO     | overall cleanup function is called
[2025-11-26 11:39:02] 2025-11-26 10:38:31,678 | INFO     | --- collectZombieJob: --- 10, [3083329]
[2025-11-26 11:39:02] 2025-11-26 10:38:31,678 | INFO     | zombie collector waiting for pid 3083329
[2025-11-26 11:39:02] 2025-11-26 10:38:31,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:39:02] 2025-11-26 10:38:31,679 | INFO     | collected zombie processes
[2025-11-26 11:39:02] 2025-11-26 10:38:31,679 | INFO     | will attempt to kill all subprocesses of pid=3083329
[2025-11-26 11:39:02] 2025-11-26 10:38:31,711 | INFO     | process IDs to be killed: [3083329] (in reverse order)
[2025-11-26 11:39:02] 2025-11-26 10:38:31,731 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:39:02] 2025-11-26 10:38:31,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:39:02] 2025-11-26 10:38:31,732 | INFO     | did not find any defunct processes belonging to 3083329
[2025-11-26 11:39:02] 2025-11-26 10:38:31,732 | INFO     | did not find any defunct processes belonging to 3083329
[2025-11-26 11:39:02] 2025-11-26 10:38:31,733 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:39:02] 2025-11-26 10:38:31,733 | INFO     | ready for new job
[2025-11-26 11:39:02] 2025-11-26 10:38:31,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:39:02] 2025-11-26 10:38:31,734 | INFO     | ***************************************
[2025-11-26 11:39:02] 2025-11-26 10:38:31,734 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:39:02] 2025-11-26 10:38:31,734 | INFO     | ***************************************
[2025-11-26 11:39:02] 2025-11-26 10:38:31,734 | INFO     | 
[2025-11-26 11:39:02] 2025-11-26 10:38:31,734 | INFO     | architecture information:
[2025-11-26 11:39:02] 2025-11-26 10:38:31,735 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:39:02] 2025-11-26 10:38:31,743 | INFO     | cat /etc/os-release:
[2025-11-26 11:39:02] NAME="CentOS Linux"
[2025-11-26 11:39:02] VERSION="7 (Core)"
[2025-11-26 11:39:02] ID="centos"
[2025-11-26 11:39:02] ID_LIKE="rhel fedora"
[2025-11-26 11:39:02] VERSION_ID="7"
[2025-11-26 11:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:39:02] ANSI_COLOR="0;31"
[2025-11-26 11:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:39:02] HOME_URL="https://www.centos.org/"
[2025-11-26 11:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:39:02] 
[2025-11-26 11:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:39:02] 
[2025-11-26 11:39:02] 2025-11-26 10:38:31,743 | INFO     | ***************************************
[2025-11-26 11:39:02] 2025-11-26 10:38:32,246 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | INFO     | sufficient remaining disk space (324057169920 B)
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | INFO     | update_server=False
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:39:02] 2025-11-26 10:38:32,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:39:02] 2025-11-26 10:38:32,726 | INFO     | all payload control threads have been joined
[2025-11-26 11:39:02] 2025-11-26 10:38:33,023 | INFO     | all data control threads have been joined
[2025-11-26 11:39:02] 2025-11-26 10:38:33,110 | INFO     | all job control threads have been joined
[2025-11-26 11:39:02] 2025-11-26 10:38:33,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:39:02] 2025-11-26 10:38:33,243 | INFO     | aborting loop
[2025-11-26 11:39:02] 2025-11-26 10:38:33,264 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:33,265 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:33,266 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:33,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:39:02] 2025-11-26 10:38:33,691 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:33,732 | INFO     | [payload] control thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,027 | INFO     | [data] control thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,070 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,116 | INFO     | [job] control thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,249 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,264 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,389 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,429 | INFO     | [job] validate thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,448 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:34,571 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:37,543 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:39:02] 2025-11-26 10:38:43,674 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:39:02] 2025-11-26 10:38:45,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720343627584)>', '<ExcThread(monitor, started 139719572711168)>']
[2025-11-26 11:39:02] 2025-11-26 10:38:50,352 | INFO     | all workflow threads have been joined
[2025-11-26 11:39:02] 2025-11-26 10:38:50,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:39:02] 2025-11-26 10:38:50,353 | INFO     | traces error code: 0
[2025-11-26 11:39:02] 2025-11-26 10:38:50,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:39:02] 2025-11-26 10:39:02,836 | INFO     | PID=3076910 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:39:02] 2025-11-26 10:39:02,837 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:39:02] 2025-11-26 10:39:02,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:39:02] 2025-11-26 10:39:02,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:39:02] 2025-11-26 10:39:02,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:39:02] 2025-11-26 10:39:02,837 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 11:39:02] 2025-11-26 10:39:02,837 | INFO     | [monitor] control thread has ended
[2025-11-26 11:39:02] 2025-11-26 10:39:02,877 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:39:02] 2025-11-26 10:39:02,879 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:39:02] 2025-11-26 10:39:02,882 [wrapper] pilotpid: 3076910
[2025-11-26 11:39:02] 2025-11-26 10:39:02,884 [wrapper] Pilot exit status: 0
[2025-11-26 11:39:02] 2025-11-26 10:39:02,890 [wrapper] pandaids: 6895336384
[2025-11-26 11:39:02] 2025-11-26 10:39:02,902 [wrapper] cleanup supervisor_pilot 3149995 3076911
[2025-11-26 11:39:02] 2025-11-26 10:39:02,904 [wrapper] Test setup, not cleaning
[2025-11-26 11:39:02] 2025-11-26 10:39:02,906 [wrapper] apfmon messages muted
[2025-11-26 11:39:02] 2025-11-26 10:39:02,909 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:39:02] 2025-11-26 10:39:02,910 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:39:02]  *** Error codes and diagnostics ***
[2025-11-26 11:39:02]     "exeErrorCode": 0,
[2025-11-26 11:39:02]     "exeErrorDiag": "",
[2025-11-26 11:39:02]     "pilotErrorCode": 0,
[2025-11-26 11:39:02]     "pilotErrorDiag": "",
[2025-11-26 11:39:02]  *** Listing of results directory ***
[2025-11-26 11:39:02] total 1305668
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc    576529 Nov 22 06:12 pilot3.tar.gz
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc      5112 Nov 22 06:30 queuedata.json
[2025-11-26 11:39:02] -rwx------ 1 boinc boinc     36292 Nov 22 06:30 runpilot2-wrapper.sh
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc       100 Nov 25 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:39:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:54 run_atlas
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc       105 Nov 25 23:54 job.xml
[2025-11-26 11:39:02] -rw-r--r-- 2 boinc boinc 410695556 Nov 25 23:54 EVNT.47483658._000279.pool.root.1
[2025-11-26 11:39:02] -rw-r--r-- 2 boinc boinc    590099 Nov 25 23:54 input.tar.gz
[2025-11-26 11:39:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:54 start_atlas.sh
[2025-11-26 11:39:02] drwxrwx--x 2 boinc boinc      4096 Nov 25 23:54 shared
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:54 boinc_setup_complete
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc      6210 Nov 25 23:54 init_data.xml
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:54 boinc_lockfile
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc      2785 Nov 25 23:54 pandaJob.out
[2025-11-26 11:39:02] -rw------- 1 boinc boinc    991877 Nov 25 23:54 agis_schedconf.cvmfs.json
[2025-11-26 11:39:02] drwx------ 5 boinc boinc      4096 Nov 25 23:54 pilot3
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc       531 Nov 26 11:35 boinc_task_state.xml
[2025-11-26 11:39:02] -rw------- 1 boinc boinc 908153957 Nov 26 11:38 HITS.47556137._002754.pool.root.1
[2025-11-26 11:39:02] -rw------- 1 boinc boinc      1025 Nov 26 11:38 memory_monitor_summary.json
[2025-11-26 11:39:02] -rw------- 1 boinc boinc   1516240 Nov 26 11:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:39:02] -rw------- 1 boinc boinc   1191264 Nov 26 11:38 log.47556137._002754.job.log.tgz.1
[2025-11-26 11:39:02] -rw------- 1 boinc boinc      8580 Nov 26 11:38 heartbeat.json
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:38 boinc_mmap_file
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc        28 Nov 26 11:38 wrapper_checkpoint.txt
[2025-11-26 11:39:02] -rw------- 1 boinc boinc       817 Nov 26 11:39 pilotlog.txt
[2025-11-26 11:39:02] -rw------- 1 boinc boinc        95 Nov 26 11:39 pilot_heartbeat.json
[2025-11-26 11:39:02] -rw------- 1 boinc boinc   5928774 Nov 26 11:39 log.47556137._002754.job.log.1
[2025-11-26 11:39:02] -rw------- 1 boinc boinc       353 Nov 26 11:39 output.list
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:39 runtime_log
[2025-11-26 11:39:02] -rw------- 1 boinc boinc   7137280 Nov 26 11:39 result.tar.gz
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc      8918 Nov 26 11:39 runtime_log.err
[2025-11-26 11:39:02] -rw------- 1 boinc boinc       669 Nov 26 11:39 3BuLDmaNvg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoyHKDmQhaGIm.diag
[2025-11-26 11:39:02] -rw-r--r-- 1 boinc boinc     21556 Nov 26 11:39 stderr.txt
[2025-11-26 11:39:03] HITS file was successfully produced:
[2025-11-26 11:39:03] -rw------- 1 boinc boinc 908153957 Nov 26 11:38 shared/HITS.pool.root.1
[2025-11-26 11:39:03]  *** Contents of shared directory: ***
[2025-11-26 11:39:03] total 1295520
[2025-11-26 11:39:03] -rw-r--r-- 2 boinc boinc 410695556 Nov 25 23:54 ATLAS.root_0
[2025-11-26 11:39:03] -rw-r--r-- 2 boinc boinc    590099 Nov 25 23:54 input.tar.gz
[2025-11-26 11:39:03] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:54 start_atlas.sh
[2025-11-26 11:39:03] -rw------- 1 boinc boinc 908153957 Nov 26 11:38 HITS.pool.root.1
[2025-11-26 11:39:03] -rw------- 1 boinc boinc   7137280 Nov 26 11:39 result.tar.gz
11:39:04 (3073201): run_atlas exited; CPU time 83702.095779
11:39:04 (3073201): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN