Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:56 (23004): wrapper (7.7.26015): starting
22:53:56 (23004): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:53:56] Arguments: --nthreads 8
[2025-11-22 22:53:56] Threads: 8
[2025-11-22 22:53:56] Checking for CVMFS
[2025-11-22 22:53:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:53:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:53:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:53:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:53:57] 2.11.2.0 13817 540524 294072 153195 1 82 12724158 18432001 1 130560 8 254406799 99.598 266233541 24618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-22 22:53:57] CVMFS is ok
[2025-11-22 22:53:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:53:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:53:57] Further information can be found at the LHC@home message board.
[2025-11-22 22:53:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:53:57] Checking for apptainer binary...
[2025-11-22 22:53:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:53:57] Running /usr/bin/apptainer --version
[2025-11-22 22:53:57] apptainer version 1.3.2-1.el7
[2025-11-22 22:53:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:53:57] c-9-29.aglt2.org
[2025-11-22 22:53:57] apptainer works
[2025-11-22 22:53:57] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:53:57] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:53:58] Starting ATLAS job with PandaID=6894289132
[2025-11-22 22:53:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:14:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:14:15] 2025-11-23 21:13:42,011 | INFO     | time since job start (62374s) is within the limit (172800.0s)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,140 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 16:14:15] 2025-11-23 21:13:42,144 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 3012.9690937500004
[2025-11-23 16:14:15] 2025-11-23 21:13:42,147 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894289132/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,148 | INFO     | extracted standard info from prmon json
[2025-11-23 16:14:15] 2025-11-23 21:13:42,148 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:14:15] 2025-11-23 21:13:42,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:14:15] 2025-11-23 21:13:42,159 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:14:15] 2025-11-23 21:13:42,160 | INFO     | sum of square deviations: 331002161072.6742
[2025-11-23 16:14:15] 2025-11-23 21:13:42,176 | INFO     | sum of deviations: 2016467437169.7769
[2025-11-23 16:14:15] 2025-11-23 21:13:42,176 | INFO     | mean x: 1763901211.1183953
[2025-11-23 16:14:15] 2025-11-23 21:13:42,176 | INFO     | mean y: 2865367.2084148726
[2025-11-23 16:14:15] 2025-11-23 21:13:42,176 | INFO     | intersect: -10742832917.89626
[2025-11-23 16:14:15] 2025-11-23 21:13:42,177 | INFO     | chi2: 3.743953715668737
[2025-11-23 16:14:15] 2025-11-23 21:13:42,178 | INFO     | sum of square deviations: 326167928303.25323
[2025-11-23 16:14:15] 2025-11-23 21:13:42,193 | INFO     | sum of deviations: 2238753143543.6733
[2025-11-23 16:14:15] 2025-11-23 21:13:42,193 | INFO     | mean x: 1763901058.6214356
[2025-11-23 16:14:15] 2025-11-23 21:13:42,194 | INFO     | mean y: 2872371.703048181
[2025-11-23 16:14:15] 2025-11-23 21:13:42,194 | INFO     | intersect: -12104201001.30266
[2025-11-23 16:14:15] 2025-11-23 21:13:42,194 | INFO     | chi2: 2.1245082378199447
[2025-11-23 16:14:15] 2025-11-23 21:13:42,195 | INFO     | current chi2=2.1245082378199447 (change=43.25495454367631 %)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,195 | INFO     | sum of square deviations: 321380998746.3115
[2025-11-23 16:14:15] 2025-11-23 21:13:42,211 | INFO     | sum of deviations: 2250006533288.8335
[2025-11-23 16:14:15] 2025-11-23 21:13:42,211 | INFO     | mean x: 1763900906.124506
[2025-11-23 16:14:15] 2025-11-23 21:13:42,211 | INFO     | mean y: 2872727.4140316206
[2025-11-23 16:14:15] 2025-11-23 21:13:42,211 | INFO     | intersect: -12346297193.447016
[2025-11-23 16:14:15] 2025-11-23 21:13:42,212 | INFO     | chi2: 2.0591744014917257
[2025-11-23 16:14:15] 2025-11-23 21:13:42,212 | INFO     | current chi2=2.0591744014917257 (change=3.075245139800495 %)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,212 | INFO     | right removable region: 1011
[2025-11-23 16:14:15] 2025-11-23 21:13:42,213 | INFO     | sum of square deviations: 326167542783.2533
[2025-11-23 16:14:15] 2025-11-23 21:13:42,229 | INFO     | sum of deviations: 1783984136712.347
[2025-11-23 16:14:15] 2025-11-23 21:13:42,229 | INFO     | mean x: 1763901363.6214356
[2025-11-23 16:14:15] 2025-11-23 21:13:42,229 | INFO     | mean y: 2872689.268436578
[2025-11-23 16:14:15] 2025-11-23 21:13:42,229 | INFO     | intersect: -9644844016.611856
[2025-11-23 16:14:15] 2025-11-23 21:13:42,230 | INFO     | chi2: 2.038465964734002
[2025-11-23 16:14:15] 2025-11-23 21:13:42,230 | INFO     | current chi2=2.038465964734002 (change=45.55312059006329 %)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,231 | INFO     | sum of square deviations: 321380537892.53284
[2025-11-23 16:14:15] 2025-11-23 21:13:42,246 | INFO     | sum of deviations: 1704326903327.5967
[2025-11-23 16:14:15] 2025-11-23 21:13:42,246 | INFO     | mean x: 1763901516.1195652
[2025-11-23 16:14:15] 2025-11-23 21:13:42,247 | INFO     | mean y: 2875226.631422925
[2025-11-23 16:14:15] 2025-11-23 21:13:42,247 | INFO     | intersect: -9351346495.8681
[2025-11-23 16:14:15] 2025-11-23 21:13:42,247 | INFO     | chi2: 1.9606243420276441
[2025-11-23 16:14:15] 2025-11-23 21:13:42,247 | INFO     | current chi2=1.9606243420276441 (change=3.8186373504899485 %)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,248 | INFO     | left removable region: 20
[2025-11-23 16:14:15] 2025-11-23 21:13:42,248 | INFO     | sum of square deviations: 301786086530.8273
[2025-11-23 16:14:15] 2025-11-23 21:13:42,263 | INFO     | sum of deviations: 1814628878806.2024
[2025-11-23 16:14:15] 2025-11-23 21:13:42,263 | INFO     | mean x: 1763901485.630676
[2025-11-23 16:14:15] 2025-11-23 21:13:42,263 | INFO     | mean y: 2886591.5196770937
[2025-11-23 16:14:15] 2025-11-23 21:13:42,263 | INFO     | intersect: -10603389569.152914
[2025-11-23 16:14:15] 2025-11-23 21:13:42,264 | INFO     | chi2: 0.21311653897296268
[2025-11-23 16:14:15] 2025-11-23 21:13:42,264 | INFO     | current memory leak: 6.01 B/s (using 991 data points, chi2=0.21)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | could have reported an average CPU frequency of 3003 MHz (37 samples)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | ..............................
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . Timing measurements:
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . get job = 0 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . initial setup = 2 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . payload setup = 4 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . stage-in = 0 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . payload execution = 62343 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,265 | INFO     | . stage-out = 3 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,266 | INFO     | . log creation = 0 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,266 | INFO     | ..............................
[2025-11-23 16:14:15] 2025-11-23 21:13:42,329 | INFO     | 
[2025-11-23 16:14:15] 2025-11-23 21:13:42,329 | INFO     | job summary report
[2025-11-23 16:14:15] 2025-11-23 21:13:42,329 | INFO     | --------------------------------------------------
[2025-11-23 16:14:15] 2025-11-23 21:13:42,329 | INFO     | PanDA job id: 6894289132
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | task id: 47533967
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | errors: (none)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | pilot state: finished 
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | transexitcode: 0
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | exeerrorcode: 0
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | exeerrordiag: 
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | exitcode: 0
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | exitmsg: OK
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | cpuconsumptiontime: 482776 s
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | nevents: 1000
[2025-11-23 16:14:15] 2025-11-23 21:13:42,330 | INFO     | neventsw: 0
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | pid: 38070
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | pgrp: 38070
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | corecount: 8
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | event service: False
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | sizes: {0: 2298756, 3: 2299018, 11: 2299046, 62351: 2351820, 62354: 2360814, 62356: 2360870, 62360: 2361244}
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | --------------------------------------------------
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | 
[2025-11-23 16:14:15] 2025-11-23 21:13:42,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 16:14:15] 2025-11-23 21:13:42,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | job 6894289132 has completed (purged errors)
[2025-11-23 16:14:15] 2025-11-23 21:13:42,347 | INFO     | overall cleanup function is called
[2025-11-23 16:14:15] 2025-11-23 21:13:43,359 | INFO     | --- collectZombieJob: --- 10, [38070]
[2025-11-23 16:14:15] 2025-11-23 21:13:43,359 | INFO     | zombie collector waiting for pid 38070
[2025-11-23 16:14:15] 2025-11-23 21:13:43,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:14:15] 2025-11-23 21:13:43,359 | INFO     | collected zombie processes
[2025-11-23 16:14:15] 2025-11-23 21:13:43,360 | INFO     | will attempt to kill all subprocesses of pid=38070
[2025-11-23 16:14:15] 2025-11-23 21:13:43,502 | INFO     | process IDs to be killed: [38070] (in reverse order)
[2025-11-23 16:14:15] 2025-11-23 21:13:43,550 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:14:15] 2025-11-23 21:13:43,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:14:15] 2025-11-23 21:13:43,553 | INFO     | did not find any defunct processes belonging to 38070
[2025-11-23 16:14:15] 2025-11-23 21:13:43,557 | INFO     | did not find any defunct processes belonging to 38070
[2025-11-23 16:14:15] 2025-11-23 21:13:43,558 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:14:15] 2025-11-23 21:13:43,558 | INFO     | ready for new job
[2025-11-23 16:14:15] 2025-11-23 21:13:43,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:14:15] 2025-11-23 21:13:43,562 | INFO     | ***************************************
[2025-11-23 16:14:15] 2025-11-23 21:13:43,562 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:14:15] 2025-11-23 21:13:43,562 | INFO     | ***************************************
[2025-11-23 16:14:15] 2025-11-23 21:13:43,562 | INFO     | 
[2025-11-23 16:14:15] 2025-11-23 21:13:43,563 | INFO     | architecture information:
[2025-11-23 16:14:15] 2025-11-23 21:13:43,564 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:14:15] 2025-11-23 21:13:43,574 | INFO     | cat /etc/os-release:
[2025-11-23 16:14:15] NAME="CentOS Linux"
[2025-11-23 16:14:15] VERSION="7 (Core)"
[2025-11-23 16:14:15] ID="centos"
[2025-11-23 16:14:15] ID_LIKE="rhel fedora"
[2025-11-23 16:14:15] VERSION_ID="7"
[2025-11-23 16:14:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:14:15] ANSI_COLOR="0;31"
[2025-11-23 16:14:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:14:15] HOME_URL="https://www.centos.org/"
[2025-11-23 16:14:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:14:15] 
[2025-11-23 16:14:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:14:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:14:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:14:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:14:15] 
[2025-11-23 16:14:15] 2025-11-23 21:13:43,574 | INFO     | ***************************************
[2025-11-23 16:14:15] 2025-11-23 21:13:44,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 16:14:15] 2025-11-23 21:13:44,090 | INFO     | sufficient remaining disk space (101617500160 B)
[2025-11-23 16:14:15] 2025-11-23 21:13:44,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:14:15] 2025-11-23 21:13:44,090 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:14:15] 2025-11-23 21:13:44,090 | INFO     | update_server=False
[2025-11-23 16:14:15] 2025-11-23 21:13:44,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:14:15] 2025-11-23 21:13:44,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:14:15] 2025-11-23 21:13:44,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:14:15] 2025-11-23 21:13:44,116 | INFO     | all data control threads have been joined
[2025-11-23 16:14:15] 2025-11-23 21:13:44,168 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 16:14:15] 2025-11-23 21:13:44,168 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 16:14:15] 2025-11-23 21:13:44,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:14:15] 2025-11-23 21:13:44,168 | INFO     | will abort loop
[2025-11-23 16:14:15] 2025-11-23 21:13:44,408 | INFO     | all payload control threads have been joined
[2025-11-23 16:14:15] 2025-11-23 21:13:44,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:14:15] 2025-11-23 21:13:45,095 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,095 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,121 | INFO     | [data] control thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,147 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,172 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,355 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,414 | INFO     | [payload] control thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,498 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,591 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,655 | INFO     | all job control threads have been joined
[2025-11-23 16:14:15] 2025-11-23 21:13:45,869 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:45,902 | INFO     | [job] validate thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:46,329 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:46,589 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:46,659 | INFO     | [job] control thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:48,097 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:14:15] 2025-11-23 21:13:52,215 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:14:15] 2025-11-23 21:13:53,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865121519424)>', '<ExcThread(monitor, started 139864301352704)>']
[2025-11-23 16:14:15] 2025-11-23 21:13:58,113 | INFO     | all workflow threads have been joined
[2025-11-23 16:14:15] 2025-11-23 21:13:58,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:14:15] 2025-11-23 21:13:58,114 | INFO     | traces error code: 0
[2025-11-23 16:14:15] 2025-11-23 21:13:58,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:14:15] 2025-11-23 21:14:15,254 | INFO     | PID=26718 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 16:14:15] 2025-11-23 21:14:15,254 | INFO     | .. there are 4 such processes running
[2025-11-23 16:14:15] 2025-11-23 21:14:15,254 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:14:15] 2025-11-23 21:14:15,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:14:15] 2025-11-23 21:14:15,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:14:15] 2025-11-23 21:14:15,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:14:15] 2025-11-23 21:14:15,255 | INFO     | [monitor] control thread has ended
[2025-11-23 16:14:15] 2025-11-23 21:14:15,319 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:14:15] 2025-11-23 21:14:15,321 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:14:15] 2025-11-23 21:14:15,323 [wrapper] pilotpid: 26718
[2025-11-23 16:14:15] 2025-11-23 21:14:15,325 [wrapper] Pilot exit status: 0
[2025-11-23 16:14:15] 2025-11-23 21:14:15,331 [wrapper] pandaids: 6894289132
[2025-11-23 16:14:15] 2025-11-23 21:14:15,365 [wrapper] cleanup supervisor_pilot 46641 26719
[2025-11-23 16:14:15] 2025-11-23 21:14:15,367 [wrapper] Test setup, not cleaning
[2025-11-23 16:14:15] 2025-11-23 21:14:15,370 [wrapper] apfmon messages muted
[2025-11-23 16:14:15] 2025-11-23 21:14:15,372 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:14:15] 2025-11-23 21:14:15,373 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:14:15]  *** Error codes and diagnostics ***
[2025-11-23 16:14:15]     "exeErrorCode": 0,
[2025-11-23 16:14:15]     "exeErrorDiag": "",
[2025-11-23 16:14:15]     "pilotErrorCode": 0,
[2025-11-23 16:14:15]     "pilotErrorDiag": "",
[2025-11-23 16:14:15]  *** Listing of results directory ***
[2025-11-23 16:14:15] total 1318216
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 05:50 pilot3.tar.gz
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 06:17 queuedata.json
[2025-11-23 16:14:15] -rwx------ 1 boincer umatlas     36292 Nov 21 06:18 runpilot2-wrapper.sh
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas       100 Nov 22 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:14:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 22:53 run_atlas
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas       105 Nov 22 22:53 job.xml
[2025-11-23 16:14:15] -rw-r--r-- 2 boincer umatlas 410251084 Nov 22 22:53 EVNT.47493127._002399.pool.root.1
[2025-11-23 16:14:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:53 start_atlas.sh
[2025-11-23 16:14:15] drwxrwx--x 2 boincer umatlas      4096 Nov 22 22:53 shared
[2025-11-23 16:14:15] -rw-r--r-- 2 boincer umatlas    590105 Nov 22 22:53 input.tar.gz
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas         0 Nov 22 22:53 boinc_lockfile
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 22:53 pandaJob.out
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas        57 Nov 22 22:53 setup.sh.local
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas    989784 Nov 22 22:54 agis_schedconf.cvmfs.json
[2025-11-23 16:14:15] drwx------ 5 boincer umatlas      4096 Nov 22 22:54 pilot3
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas       533 Nov 23 16:05 boinc_task_state.xml
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas      6038 Nov 23 16:12 init_data.xml
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas 914197209 Nov 23 16:13 HITS.47533967._003704.pool.root.1
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas        95 Nov 23 16:13 pilot_heartbeat.json
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas      1060 Nov 23 16:13 memory_monitor_summary.json
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas   1526164 Nov 23 16:13 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas   2203222 Nov 23 16:13 log.47533967._003704.job.log.tgz.1
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas      8632 Nov 23 16:13 heartbeat.json
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas        29 Nov 23 16:14 wrapper_checkpoint.txt
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 16:14 boinc_mmap_file
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas       820 Nov 23 16:14 pilotlog.txt
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas   8539449 Nov 23 16:14 log.47533967._003704.job.log.1
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas       353 Nov 23 16:14 output.list
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas       620 Nov 23 16:14 runtime_log
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas  10762240 Nov 23 16:14 result.tar.gz
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas      9333 Nov 23 16:14 runtime_log.err
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas       665 Nov 23 16:14 EwQMDmrKeg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqYHKDmYL38Rn.diag
[2025-11-23 16:14:15] -rw-r--r-- 1 boincer umatlas     21270 Nov 23 16:14 stderr.txt
[2025-11-23 16:14:15] HITS file was successfully produced:
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas 914197209 Nov 23 16:13 shared/HITS.pool.root.1
[2025-11-23 16:14:15]  *** Contents of shared directory: ***
[2025-11-23 16:14:15] total 1304524
[2025-11-23 16:14:15] -rw-r--r-- 2 boincer umatlas 410251084 Nov 22 22:53 ATLAS.root_0
[2025-11-23 16:14:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:53 start_atlas.sh
[2025-11-23 16:14:15] -rw-r--r-- 2 boincer umatlas    590105 Nov 22 22:53 input.tar.gz
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas 914197209 Nov 23 16:13 HITS.pool.root.1
[2025-11-23 16:14:15] -rw------- 1 boincer umatlas  10762240 Nov 23 16:14 result.tar.gz
16:14:17 (23004): run_atlas exited; CPU time 482755.485875
16:14:17 (23004): called boinc_finish(0)

</stderr_txt>
]]>

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